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The map label for this gene is yqjF [H]

Identifier: 108810601

GI number: 108810601

Start: 532397

End: 532792

Strand: Reverse

Name: yqjF [H]

Synonym: YPN_0436

Alternate gene names: 108810601

Gene position: 532792-532397 (Counterclockwise)

Preceding gene: 108810602

Following gene: 108810600

Centisome position: 11.75

GC content: 49.75

Gene sequence:

>396_bases
ATGAACAAATTACAAGATACTGGCCTGTTGGTCGCTCGCATTCTCATGCCAATCATCTTTATTGTGGCCGGTTACGGCAA
AATGGGCGATGCCTATGCCGGGACCCAACAATATATGCAAGCGATGGGCGTTCCTGGCTTTTTCCTGCCACTGACCATTT
TATTGGAATTTGGTGGTGGCCTGGCCATTCTGTTTGGTTTCCTGACCCGCACCACCTCGCTGTTCATTGCCGGGTTCACT
CTCCTGACAGCGTTTATCTTCCACACTGACTTTACGGATAGCACTAACCAACTGATGTTCATGAAGAACCTGAGCATCGC
AGGGGGTTTCTTGGTATTGGCGATGGCTGGCCCAGGTGGTTTTAGCATCGACCGCTTACTGGGTAAAAAGTGGTAA

Upstream 100 bases:

>100_bases
ACATGTCGCTTGAAGTCTGACGGGTATAAAACTCTGTTGTTAACAGTTAATGCTCATAAATGTTAGTCATTAATCAACAC
CGTCTTTGGAGAAGTTATCG

Downstream 100 bases:

>100_bases
TCAGGGTTTAATCGCGATAATGCATGATAGTTAATATCAGCGATACCCTATCCATCCGGTAGGGTATTTTTTTAAGGGGG
ATTTCATGGGGCAACTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MNKLQDTGLLVARILMPIIFIVAGYGKMGDAYAGTQQYMQAMGVPGFFLPLTILLEFGGGLAILFGFLTRTTSLFIAGFT
LLTAFIFHTDFTDSTNQLMFMKNLSIAGGFLVLAMAGPGGFSIDRLLGKKW

Sequences:

>Translated_131_residues
MNKLQDTGLLVARILMPIIFIVAGYGKMGDAYAGTQQYMQAMGVPGFFLPLTILLEFGGGLAILFGFLTRTTSLFIAGFT
LLTAFIFHTDFTDSTNQLMFMKNLSIAGGFLVLAMAGPGGFSIDRLLGKKW
>Mature_131_residues
MNKLQDTGLLVARILMPIIFIVAGYGKMGDAYAGTQQYMQAMGVPGFFLPLTILLEFGGGLAILFGFLTRTTSLFIAGFT
LLTAFIFHTDFTDSTNQLMFMKNLSIAGGFLVLAMAGPGGFSIDRLLGKKW

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI87082210, Length=131, Percent_Identity=75.5725190839695, Blast_Score=201, Evalue=1e-53,
Organism=Escherichia coli, GI145693171, Length=125, Percent_Identity=40.8, Blast_Score=76, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14187; Mature: 14187

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLQDTGLLVARILMPIIFIVAGYGKMGDAYAGTQQYMQAMGVPGFFLPLTILLEFGGG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
LAILFGFLTRTTSLFIAGFTLLTAFIFHTDFTDSTNQLMFMKNLSIAGGFLVLAMAGPGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEECCCC
FSIDRLLGKKW
CHHHHHHCCCC
>Mature Secondary Structure
MNKLQDTGLLVARILMPIIFIVAGYGKMGDAYAGTQQYMQAMGVPGFFLPLTILLEFGGG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
LAILFGFLTRTTSLFIAGFTLLTAFIFHTDFTDSTNQLMFMKNLSIAGGFLVLAMAGPGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEECCCC
FSIDRLLGKKW
CHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]