| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108810248
Identifier: 108810248
GI number: 108810248
Start: 114830
End: 114988
Strand: Reverse
Name: 108810248
Synonym: YPN_0082
Alternate gene names: NA
Gene position: 114988-114830 (Counterclockwise)
Preceding gene: 108810249
Following gene: 108810242
Centisome position: 2.54
GC content: 44.65
Gene sequence:
>159_bases TTGGGGGCGAGTAGTGCACAGACACTGGAAGCTTATTACGGTTTGAATATAACTCATAATTTCTCTCCTTGTTATATACC CGTCCCCCTGCAAGATGCAGGGACGTTAGCCGCCCTTGCTCACCCCAGTCACTTAGTTGTTGACCTTAAAAATAAATAA
Upstream 100 bases:
>100_bases GCGACAACAAAACCGTCAATTTTGATTTAATTGATGATTTAGGCAACCGAAACTCTTTTAGCCATGAGTTGAAATAAAGT GCGCTGCTGGGAATGGCAGT
Downstream 100 bases:
>100_bases GCACCTGGGGATTAATGAGCCTCACCCCTGAGACTCACCCTGCGGGCAGCATAAATGCTGTTCAAATGATTCCCGACCCA TTTGTTACTCCGTTGCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 51
Protein sequence:
>52_residues MGASSAQTLEAYYGLNITHNFSPCYIPVPLQDAGTLAALAHPSHLVVDLKNK
Sequences:
>Translated_52_residues MGASSAQTLEAYYGLNITHNFSPCYIPVPLQDAGTLAALAHPSHLVVDLKNK >Mature_51_residues GASSAQTLEAYYGLNITHNFSPCYIPVPLQDAGTLAALAHPSHLVVDLKNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5539; Mature: 5408
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGASSAQTLEAYYGLNITHNFSPCYIPVPLQDAGTLAALAHPSHLVVDLKNK CCCCCCCEEEEEECCEEECCCCCEEEEECCCCCCCEEEECCCCEEEEEEECC >Mature Secondary Structure GASSAQTLEAYYGLNITHNFSPCYIPVPLQDAGTLAALAHPSHLVVDLKNK CCCCCCEEEEEECCEEECCCCCEEEEECCCCCCCEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA