The gene/protein map for NC_008149 is currently unavailable.
Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

Click here to switch to the map view.

The map label for this gene is 108810237

Identifier: 108810237

GI number: 108810237

Start: 105367

End: 105831

Strand: Reverse

Name: 108810237

Synonym: YPN_0071

Alternate gene names: NA

Gene position: 105831-105367 (Counterclockwise)

Preceding gene: 108810238

Following gene: 108810231

Centisome position: 2.33

GC content: 33.12

Gene sequence:

>465_bases
ATGAAAGCAAAAAGTAAAAAAATCATCTGCGCGCTATTACTGCTTGGCAGCATTTTACTGGGTTATTTCTTCTGGTTATC
ACGGCATCCGGTTGAAATCATCTCCGTTCATCAGAGAAATAATTATAGTGATATTTTAGTAAGAAACTTCCCTTTCACTG
AGAAAGGGAAAATAAACTGGTGGCTAGAAAACAGGGATATGCTGAAAGCCAAATATAGCATTCCAAAACCTGCATCAGAT
GGTTTTTACACTATCATATTTTGGGATTTTGGTGACGGTTATAAAGAGGAAGGAAAGTACGACAGACTGTGTTTTAGCGA
TATGAATACGACCAAAAATTGTATCGAGAAAGAAAAATATATGACTATTTACAAGATAAAAAATGATGAACCATTGTTCT
CCTTTGATGGAAATAGATATTTTTTAAACGAAAACAATAAAATTGTTAAAATGAAACGCGAATAA

Upstream 100 bases:

>100_bases
GTTAAAATGAAACGCGAATAAAATTTCGCCTCTTATGTAGTTTAGCCTCAAGCATTTATGACCAATATGGAAGCCACAAT
TGAGATTACCGGGGGCCGTA

Downstream 100 bases:

>100_bases
AATTTCATCTCTTATATAATTTGATCATCTGAACAGCAGAAGTGATATACCCGTCAGACGCCAAGCTGCATATGTGCTAA
TTGCTTTCGTTCACCTCTGC

Product: membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKAKSKKIICALLLLGSILLGYFFWLSRHPVEIISVHQRNNYSDILVRNFPFTEKGKINWWLENRDMLKAKYSIPKPASD
GFYTIIFWDFGDGYKEEGKYDRLCFSDMNTTKNCIEKEKYMTIYKIKNDEPLFSFDGNRYFLNENNKIVKMKRE

Sequences:

>Translated_154_residues
MKAKSKKIICALLLLGSILLGYFFWLSRHPVEIISVHQRNNYSDILVRNFPFTEKGKINWWLENRDMLKAKYSIPKPASD
GFYTIIFWDFGDGYKEEGKYDRLCFSDMNTTKNCIEKEKYMTIYKIKNDEPLFSFDGNRYFLNENNKIVKMKRE
>Mature_154_residues
MKAKSKKIICALLLLGSILLGYFFWLSRHPVEIISVHQRNNYSDILVRNFPFTEKGKINWWLENRDMLKAKYSIPKPASD
GFYTIIFWDFGDGYKEEGKYDRLCFSDMNTTKNCIEKEKYMTIYKIKNDEPLFSFDGNRYFLNENNKIVKMKRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18411; Mature: 18411

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKSKKIICALLLLGSILLGYFFWLSRHPVEIISVHQRNNYSDILVRNFPFTEKGKINW
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCCCCCCEEE
WLENRDMLKAKYSIPKPASDGFYTIIFWDFGDGYKEEGKYDRLCFSDMNTTKNCIEKEKY
EECCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHE
MTIYKIKNDEPLFSFDGNRYFLNENNKIVKMKRE
EEEEEECCCCCEEEECCCEEEECCCCEEEEEECC
>Mature Secondary Structure
MKAKSKKIICALLLLGSILLGYFFWLSRHPVEIISVHQRNNYSDILVRNFPFTEKGKINW
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCCCCCCEEE
WLENRDMLKAKYSIPKPASDGFYTIIFWDFGDGYKEEGKYDRLCFSDMNTTKNCIEKEKY
EECCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHE
MTIYKIKNDEPLFSFDGNRYFLNENNKIVKMKRE
EEEEEECCCCCEEEECCCEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA