| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801936
Identifier: 108801936
GI number: 108801936
Start: 5262935
End: 5263786
Strand: Reverse
Name: 108801936
Synonym: Mmcs_4973
Alternate gene names: NA
Gene position: 5263786-5262935 (Counterclockwise)
Preceding gene: 108801937
Following gene: 108801935
Centisome position: 92.26
GC content: 71.48
Gene sequence:
>852_bases ATGATCTCGGTCCTCGGCCAGGGGCCGATGGGGCAGGCGTTGACGAATGCCCTGCTCGATGCCGGGTGCCGCACGACCGT GTGGAACCGCACCGCCGCCAGGGCCGACGGCGTCCGCGCCCGCGGGGCGCGGTGGGCCGACAGTCCCGCCGACGCCATCG CCGCCGCGGACGTCACGTTGGTCAACGTCGTCGACCAGGCCGTGCTCGACGATGTGGTGACCGCCGCCGGCCATGCGGTC GCAGGCCGGGTCATCGTCGGCCTGGCCTCGGACACTCCCGACACCGCGCGCGACACCGCCATGCTGGTCGAAAAGCTCGG CGGCCGCTATCTCGACGGGGCGATCATGACGCCGACCGACACCATCGGCAGCGCACACGCCAGCATCCTGTTCTCGGGAC CGCGCGATCTCTACGACACCCATCGCGAGGTGTTCGACGTGCTGGCCACCACGACGTGGCTCGGCGACGACCCGGGTCGG GCCGCCGCATTCGACATGGCACTGCTCGACCTGTTCTGGACGTCGGTCAGCGGTGTGCTGCACGCCGTGAACGTCGCTCG GGCCAATGGGATCTCGCCGATGGAACTGCTGCCGCACGCGCAGGGCATCGTCGGCATCCTGCCCCCGGTCGTCGACGAAC TGCTCGAGCGGATCGACGCGGACCGGCACGACGACAGCCGCGCGCAGGTCGCCTCGGTCGCCGCGTCGGTGCGCCACCTC ATCGCGGCGTCGCGGGCGGCGGGTGTGGACGCCGGTGCGCTGGAGGCCTTCCGCGGGTACGTCGACACCGCGGTGGCGGC CGGTTACGGCGCCGACGAGATCAGCCGCATCGGACAGACGATGAGTTCGTGA
Upstream 100 bases:
>100_bases ACACGGTGCAGCGGCTCATCCGCAGGCAGATCGACACCGGTCACGGCGCGGAAGGGTTCGCCCGCGTCATCGAGAGCATC CGGAACCCGTTGGGGGCGGC
Downstream 100 bases:
>100_bases ACAGTGCGCCGTTCCCTCGCACATCCCCGGTCACGGTGGCAGGGTCGTCGACATGGACTCGAAGCCACCGAGTGACGCCA TCCAAGCGGCCCACCGGCAT
Product: 6-phosphogluconate dehydrogenase protein
Products: NA
Alternate protein names: NAD-Dependent Glycerol-3-Phosphate Dehydrogenase; 6-Phosphogluconate Dehydrogenase; Oxidoreductase; Oxidoreductase Protein; Pyrroline-5-Carboxylate Reductase; 3-Hydroxyisobutyrate Dehydrogenase; Membrane-Bound Dehydrogenase
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MISVLGQGPMGQALTNALLDAGCRTTVWNRTAARADGVRARGARWADSPADAIAAADVTLVNVVDQAVLDDVVTAAGHAV AGRVIVGLASDTPDTARDTAMLVEKLGGRYLDGAIMTPTDTIGSAHASILFSGPRDLYDTHREVFDVLATTTWLGDDPGR AAAFDMALLDLFWTSVSGVLHAVNVARANGISPMELLPHAQGIVGILPPVVDELLERIDADRHDDSRAQVASVAASVRHL IAASRAAGVDAGALEAFRGYVDTAVAAGYGADEISRIGQTMSS
Sequences:
>Translated_283_residues MISVLGQGPMGQALTNALLDAGCRTTVWNRTAARADGVRARGARWADSPADAIAAADVTLVNVVDQAVLDDVVTAAGHAV AGRVIVGLASDTPDTARDTAMLVEKLGGRYLDGAIMTPTDTIGSAHASILFSGPRDLYDTHREVFDVLATTTWLGDDPGR AAAFDMALLDLFWTSVSGVLHAVNVARANGISPMELLPHAQGIVGILPPVVDELLERIDADRHDDSRAQVASVAASVRHL IAASRAAGVDAGALEAFRGYVDTAVAAGYGADEISRIGQTMSS >Mature_283_residues MISVLGQGPMGQALTNALLDAGCRTTVWNRTAARADGVRARGARWADSPADAIAAADVTLVNVVDQAVLDDVVTAAGHAV AGRVIVGLASDTPDTARDTAMLVEKLGGRYLDGAIMTPTDTIGSAHASILFSGPRDLYDTHREVFDVLATTTWLGDDPGR AAAFDMALLDLFWTSVSGVLHAVNVARANGISPMELLPHAQGIVGILPPVVDELLERIDADRHDDSRAQVASVAASVRHL IAASRAAGVDAGALEAFRGYVDTAVAAGYGADEISRIGQTMSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI40556376, Length=201, Percent_Identity=27.363184079602, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28574115, Length=194, Percent_Identity=26.2886597938144, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29348; Mature: 29348
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISVLGQGPMGQALTNALLDAGCRTTVWNRTAARADGVRARGARWADSPADAIAAADVTL CCCCCCCCCCHHHHHHHHHHCCCCHHHHCCHHHHHCCCHHCCCCCCCCCHHHHHHHHHHH VNVVDQAVLDDVVTAAGHAVAGRVIVGLASDTPDTARDTAMLVEKLGGRYLDGAIMTPTD HHHHHHHHHHHHHHHHCHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCEECCEEECCCH TIGSAHASILFSGPRDLYDTHREVFDVLATTTWLGDDPGRAAAFDMALLDLFWTSVSGVL HHCCHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH HAVNVARANGISPMELLPHAQGIVGILPPVVDELLERIDADRHDDSRAQVASVAASVRHL HHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH IAASRAAGVDAGALEAFRGYVDTAVAAGYGADEISRIGQTMSS HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MISVLGQGPMGQALTNALLDAGCRTTVWNRTAARADGVRARGARWADSPADAIAAADVTL CCCCCCCCCCHHHHHHHHHHCCCCHHHHCCHHHHHCCCHHCCCCCCCCCHHHHHHHHHHH VNVVDQAVLDDVVTAAGHAVAGRVIVGLASDTPDTARDTAMLVEKLGGRYLDGAIMTPTD HHHHHHHHHHHHHHHHCHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCEECCEEECCCH TIGSAHASILFSGPRDLYDTHREVFDVLATTTWLGDDPGRAAAFDMALLDLFWTSVSGVL HHCCHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH HAVNVARANGISPMELLPHAQGIVGILPPVVDELLERIDADRHDDSRAQVASVAASVRHL HHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH IAASRAAGVDAGALEAFRGYVDTAVAAGYGADEISRIGQTMSS HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA