| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801849
Identifier: 108801849
GI number: 108801849
Start: 5175021
End: 5175455
Strand: Reverse
Name: 108801849
Synonym: Mmcs_4886
Alternate gene names: NA
Gene position: 5175455-5175021 (Counterclockwise)
Preceding gene: 108801850
Following gene: 108801848
Centisome position: 90.71
GC content: 71.26
Gene sequence:
>435_bases ATGATCGGGCGCATGACCGAAACACCTTCGACCCCAGCGTCGCCCACCGACCCCAAGACCGAACCCGTCTTCACCGACAC ACCGCCCCCGGCCTACCCGGCCGCGCCCGCCGAGGAGCGCCGCCGGCCCGGCCGCGTGACCACCATCGCCGCCTGGGTCG GCATCGTGGCGGGCGTCGTGTTCATCGTCGCCGTCGTCTTCTTCTCCGGGTTCGTGCTGGGCAAGAACTCCGGCGATGGA TTTCAGCGGGGTGGGGGTGCCGGTCACGGCCAGATGATGTTCCACCGCGACGGGCCTCCCGGGATGTCCCCGATGGGTCC GCGCGGCCAGTTCGAACGGCCCGGCATGCCGTTCGGGCCAGGTCAGCCCGGTATGCAAACCCCGCAGCAGACCCAGCCGG GAAGCCCCGCGACCACGGCTCCCGCACGTCCGTGA
Upstream 100 bases:
>100_bases CGGGACAACCGGTGCCCTGGCCGCCTCGCTGACGGCGGCCGCCCACACCTTCACAGCGGATTCATAGCCCATACAGGACC CGCACAGAAGCGGCGCTCGC
Downstream 100 bases:
>100_bases CGAGGCTCATGCCCAGCTAATCTTGACCCACTCCAGATACGGCGGACACTCGATGGAGTGACCCCGGCGCGTGAGACGAC CCCCGAGGCCCGGCTGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MIGRMTETPSTPASPTDPKTEPVFTDTPPPAYPAAPAEERRRPGRVTTIAAWVGIVAGVVFIVAVVFFSGFVLGKNSGDG FQRGGGAGHGQMMFHRDGPPGMSPMGPRGQFERPGMPFGPGQPGMQTPQQTQPGSPATTAPARP
Sequences:
>Translated_144_residues MIGRMTETPSTPASPTDPKTEPVFTDTPPPAYPAAPAEERRRPGRVTTIAAWVGIVAGVVFIVAVVFFSGFVLGKNSGDG FQRGGGAGHGQMMFHRDGPPGMSPMGPRGQFERPGMPFGPGQPGMQTPQQTQPGSPATTAPARP >Mature_144_residues MIGRMTETPSTPASPTDPKTEPVFTDTPPPAYPAAPAEERRRPGRVTTIAAWVGIVAGVVFIVAVVFFSGFVLGKNSGDG FQRGGGAGHGQMMFHRDGPPGMSPMGPRGQFERPGMPFGPGQPGMQTPQQTQPGSPATTAPARP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14983; Mature: 14983
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGRMTETPSTPASPTDPKTEPVFTDTPPPAYPAAPAEERRRPGRVTTIAAWVGIVAGVV CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH FIVAVVFFSGFVLGKNSGDGFQRGGGAGHGQMMFHRDGPPGMSPMGPRGQFERPGMPFGP HHHHHHHHHCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC GQPGMQTPQQTQPGSPATTAPARP CCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIGRMTETPSTPASPTDPKTEPVFTDTPPPAYPAAPAEERRRPGRVTTIAAWVGIVAGVV CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH FIVAVVFFSGFVLGKNSGDGFQRGGGAGHGQMMFHRDGPPGMSPMGPRGQFERPGMPFGP HHHHHHHHHCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC GQPGMQTPQQTQPGSPATTAPARP CCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA