Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

Click here to switch to the map view.

The map label for this gene is 108801798

Identifier: 108801798

GI number: 108801798

Start: 5119738

End: 5120607

Strand: Reverse

Name: 108801798

Synonym: Mmcs_4835

Alternate gene names: NA

Gene position: 5120607-5119738 (Counterclockwise)

Preceding gene: 108801799

Following gene: 108801797

Centisome position: 89.75

GC content: 61.72

Gene sequence:

>870_bases
ATGAGCGGAAGCGACAAGTTGCGGGCGCGCCAGCGTGCGCGAGAAGCGCAGCGCAGGGCGAACGAGAAGCGCGCAAGCGA
TGCACGCGCAAACGTAGACGATGCCGCCTCGATTCGTGTGCTGCTGCAGCGAGTGGGAGCCGTTGATGCTTGGGAGAGTG
TGCGACTCGATCAAGTGACTGAGAACGTCCGCAGGGATGCGGCATGCAAGCGCATGAGCCACTTCGTCAACCTGCAAACC
GTTATCGGGCGGATGAGGGACCGCGGTCAAACTATTGCATCGATCGCCGATCTCGCTGAAGTCGGTGCTCGCGACCTTCA
GAATGTGCTCCGCAGAGCGCGTGCCGGTGACGGCGGTGCGCAGCGTGTAACCAAGTCCCGTAATGCCGGCGGCCTGGGCG
CGAACGGCGCAACATTGCGAAGCCACAGCGCAGTTGATGTTGATCATCGGTCGATGGGAGCAGATAGCGACTCGACGTTC
GATCCAACTCGGTGCGTCCGTTGCGATGCCGTCATGCTGGATCCTGAAGTCACGTCTCGGAGGGGGCGTCCGCGCCGTTA
TTGCTCTGACACGTGCCGCAGAGACGCCTCAGCAGCACGCACAGCCGCCCAGCGCCATGGAGAACCTATTCGCGTCGTCG
AGGTTCCTCGTGCTGCTGGCGGCAGTGAACTGCGGACACAGCACGATGGCGCCACTGCTTCGGAGATTCGTTCCGTCTGC
GAAGCGGTCGAACTGGCTCTCCACAACGCCGACGCCATGAAGATCTTGTTGTCGAGTGTCGCTGAACGGGCGCGGCGTAA
AGAATTGGACCGCAGCACCTTCGAGGTCGCTCGCGAACTCGCCAGAGCGGTCTATCCGAATCGAAATTAA

Upstream 100 bases:

>100_bases
GGCGTTCGTGAAGCTGGATATCGAGAAAGGCATCCGCGATACGCGCGAATGTGGCTGCGGTGGTGGACGATAACTCGCGG
CCTGTTCTACGTTTGCGTCC

Downstream 100 bases:

>100_bases
TGTGCCCTGACTTTTGCTGTCCGTCAGGTGGCACGCACTCGGTGTCCGCGTGCATTCGATTCATAGTGGCCGCCCACGAG
GAGCCCGACGCGAAAAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSGSDKLRARQRAREAQRRANEKRASDARANVDDAASIRVLLQRVGAVDAWESVRLDQVTENVRRDAACKRMSHFVNLQT
VIGRMRDRGQTIASIADLAEVGARDLQNVLRRARAGDGGAQRVTKSRNAGGLGANGATLRSHSAVDVDHRSMGADSDSTF
DPTRCVRCDAVMLDPEVTSRRGRPRRYCSDTCRRDASAARTAAQRHGEPIRVVEVPRAAGGSELRTQHDGATASEIRSVC
EAVELALHNADAMKILLSSVAERARRKELDRSTFEVARELARAVYPNRN

Sequences:

>Translated_289_residues
MSGSDKLRARQRAREAQRRANEKRASDARANVDDAASIRVLLQRVGAVDAWESVRLDQVTENVRRDAACKRMSHFVNLQT
VIGRMRDRGQTIASIADLAEVGARDLQNVLRRARAGDGGAQRVTKSRNAGGLGANGATLRSHSAVDVDHRSMGADSDSTF
DPTRCVRCDAVMLDPEVTSRRGRPRRYCSDTCRRDASAARTAAQRHGEPIRVVEVPRAAGGSELRTQHDGATASEIRSVC
EAVELALHNADAMKILLSSVAERARRKELDRSTFEVARELARAVYPNRN
>Mature_288_residues
SGSDKLRARQRAREAQRRANEKRASDARANVDDAASIRVLLQRVGAVDAWESVRLDQVTENVRRDAACKRMSHFVNLQTV
IGRMRDRGQTIASIADLAEVGARDLQNVLRRARAGDGGAQRVTKSRNAGGLGANGATLRSHSAVDVDHRSMGADSDSTFD
PTRCVRCDAVMLDPEVTSRRGRPRRYCSDTCRRDASAARTAAQRHGEPIRVVEVPRAAGGSELRTQHDGATASEIRSVCE
AVELALHNADAMKILLSSVAERARRKELDRSTFEVARELARAVYPNRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31721; Mature: 31590

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSDKLRARQRAREAQRRANEKRASDARANVDDAASIRVLLQRVGAVDAWESVRLDQVT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
ENVRRDAACKRMSHFVNLQTVIGRMRDRGQTIASIADLAEVGARDLQNVLRRARAGDGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
QRVTKSRNAGGLGANGATLRSHSAVDVDHRSMGADSDSTFDPTRCVRCDAVMLDPEVTSR
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCEEEECCHHHHC
RGRPRRYCSDTCRRDASAARTAAQRHGEPIRVVEVPRAAGGSELRTQHDGATASEIRSVC
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCCCCHHHHHHHH
EAVELALHNADAMKILLSSVAERARRKELDRSTFEVARELARAVYPNRN
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGSDKLRARQRAREAQRRANEKRASDARANVDDAASIRVLLQRVGAVDAWESVRLDQVT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
ENVRRDAACKRMSHFVNLQTVIGRMRDRGQTIASIADLAEVGARDLQNVLRRARAGDGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
QRVTKSRNAGGLGANGATLRSHSAVDVDHRSMGADSDSTFDPTRCVRCDAVMLDPEVTSR
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCEEEECCHHHHC
RGRPRRYCSDTCRRDASAARTAAQRHGEPIRVVEVPRAAGGSELRTQHDGATASEIRSVC
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCCCCHHHHHHHH
EAVELALHNADAMKILLSSVAERARRKELDRSTFEVARELARAVYPNRN
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA