| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801795
Identifier: 108801795
GI number: 108801795
Start: 5116283
End: 5118625
Strand: Reverse
Name: 108801795
Synonym: Mmcs_4832
Alternate gene names: NA
Gene position: 5118625-5116283 (Counterclockwise)
Preceding gene: 108801796
Following gene: 108801794
Centisome position: 89.71
GC content: 64.87
Gene sequence:
>2343_bases ATGGCCGCTTCGCTACCTGCTCGCACCTATTCACGCTTTATCGTGGCGCCTGACGTATGGCCGACCACGCGCGAAGAATC TGAAGGCAGGGCTGCGGCTCAACGTCATCTGGCGACTGCGACCGCGGCCGCAGTAGATGCTCACCGGGTCGCCTTGCACG GATTGCAGGCTGCCGGTGTGGCGCAGTCAAGTGGTTTCGAAGCAATGCACGCTGCCTACAGACGTATTCAAGTCCGGGCC GACGACAAGGCTGAGGCGGACGGTGCCGCGGCTGATCTGATGCAGAGTGTTGCCGCGATCCAGATGAGTGCTGAGCTGAT GATCGACACGATCGATGCTGAGGCACATCAGCAACTTGTCCATGTGCCGAGCAGAAGTCCCATCGCGATCGGCATCATCA CCGGTGCTGCTGCGCGGACACGAGCGACCGCTGTCGGTGCGGCCGATGAGATTCGCGCTCTTACCGTGCAATTCGGGCAG AGATTTGCGCCATTGCCGGAGGGGCCGCCGAGTGGCGATCCGGTCGGTGCTGGCGATGACGATCGGTCGACCGATAAGCG ATCCGACGAATCGCCCGAGCGTCCGCCCGACGCAGTAGTAGAGACCGGCGGTACGCAGACTCGTCATTCGGCGCCAGACC CGCCTGATGCCAACCTGTCGTCTGGCAACAATGCGCCGAGAGTCAGCACCGGGCCTACCCCTGGTTCTTCCTCGGTGTCA TCGCAACTCTCGGCGCAGGGCACCGGTCCCGCGTACGGCGCCGCTGTGGCAGATATCGGAAGCAGTGGGGCCTGCCTCAC CGGTACAGGACCATGGTCATCCGCAGGCTCGATGGCCGCGCTCGGCGGTTCGGCATCGTCGTTATCGGGATCGGGCGCTG GAGGAATGTCGCACGCAGGCTCCGTACGACCATCAGCGTCCGCATCGTCGCCATCTGCCGTCGCGCTGCAGGGGGTCATG CACGCGAGTGCTCCGGCGCCGCTGTCCTCGGTGGCCGGCACCCAGACAACAACCCCTGCTCCTTTCCCAGCCGCTGCGTC GGCGGCAATGCAGGCGCCATCGCCGAGTGGTACATCGCAGCCGCCTATTGCGGCGACCACGGGTGCGGTACCAGTGTCTA TTGCTGGGCCGCAGGCCGTGTCTAGCGGTGGTCCCCATTCCCCGGTTGCAGCGTCCTTGCTGCCCCCAGGCCCGCTGGGT CCGCCGCCGTCGGCTTCGGCCGCCATTGCGCCGGCGACGGGTGCTGGTCCGTCGGTTGGCGGTGCTCATGCGTCAATGAC CCCTGCCACCGCATCCATCGCAGCAGCAGCACTGACAACTCCGGCCGCGACGCTGCCGTCGCGGGTAGCGGCCGCCGCAG CCCGCGACTTGGAACGGCAGCGCAACGAGTCGAGCGATCTACAAATGGTCAAGCGGTTGGCATGGGAACTGCTGTACGCC ACCGAGACTTGTCGTTCTTTCGCGCTCTGGGCGGTTGGCTTGATGTATTCAGCAACCGGGGATCGGCTTATTGTTGCGCT GACCCACCACGGTGCAGGCTACGTACCAGCGGGGGTCGAGATCCGTCGAGGCGTGCGGATGCTTTGGTCCGACCAAGCTA TTGGTGAGGGCTTTCGTAGCCGGTGGACCGGGAATCTCGATCCGGCAGCAACGCTGGCGGCCTACGCGGAACTCAAGGCC GCGGAGCCGGCTGGCTGGCGCTTGGCCGCTGCAGCGACCACCTGGTCGGAGGTAGCGGCGCTGATGACTGCCGCGCAGCG CTGGGGCACTGAATGGGCCACCTGCTCCGGCATGTCCATGCCCGCCTCGATCGAAAAGCTGGCCGCCATCTCTGACGAGG ATGCTCCGCACCGACTGGAGCGAGAGTTCCCCGAACTTTTCGAGCGTGTAGCCCAACTTCGTGCTAGAGGGCTCACCCAT CGGGCAGCCAGACTGATCACCGAAGCGATCGTTTCCGACGCGCGCCTCGCGATCGTCACCGCTGATGCCCCTCGGATTCC GTCGAACTTCGATTCGGTATGGCCGGTGGCGGCTGACGGCAGGATAGATGCCGCGGACCGTGCCCAGTTTGCCGAAGCGG TTCAGCAGCAATGGTTCAGCATTGGAATGGTGCAGCCGGGTTGGGACGACGAACCCACTGGGAGCGCCTGCACAGAGTAC CGGGCGCAATGGCTCATTTGCCGGGCGCTTGAGGTGGTCCTGGGGTGGATTGCTGACGGCAACAGCGGGGCAGTGCCGGC GGATCTGCCGATGGAAGACATGATCTACGCCGCAGCACATGCTTACCTTGACGGTCGCGGAACCGGTTGGATCACTGATC TTTTCGACGCCGCAGGAGCGTGA
Upstream 100 bases:
>100_bases TGCGGCGCGAACCCGCTTCGATTTCGAACGACATGATCGATCGGTATTCGAGTGCACTCCAGGCCGCTGAAACTGTCTGC GAAGCAGCGGGAGCCGGCTG
Downstream 100 bases:
>100_bases TTTCGGAGAATGGATTCCGTTTCTCATGGTGTAGATGGTGAAGCTTGGCGGGCCGAGCTGGAGCGGCTGCATGCGCATCT GGTGAACGTCGTCGATCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 780; Mature: 779
Protein sequence:
>780_residues MAASLPARTYSRFIVAPDVWPTTREESEGRAAAQRHLATATAAAVDAHRVALHGLQAAGVAQSSGFEAMHAAYRRIQVRA DDKAEADGAAADLMQSVAAIQMSAELMIDTIDAEAHQQLVHVPSRSPIAIGIITGAAARTRATAVGAADEIRALTVQFGQ RFAPLPEGPPSGDPVGAGDDDRSTDKRSDESPERPPDAVVETGGTQTRHSAPDPPDANLSSGNNAPRVSTGPTPGSSSVS SQLSAQGTGPAYGAAVADIGSSGACLTGTGPWSSAGSMAALGGSASSLSGSGAGGMSHAGSVRPSASASSPSAVALQGVM HASAPAPLSSVAGTQTTTPAPFPAAASAAMQAPSPSGTSQPPIAATTGAVPVSIAGPQAVSSGGPHSPVAASLLPPGPLG PPPSASAAIAPATGAGPSVGGAHASMTPATASIAAAALTTPAATLPSRVAAAAARDLERQRNESSDLQMVKRLAWELLYA TETCRSFALWAVGLMYSATGDRLIVALTHHGAGYVPAGVEIRRGVRMLWSDQAIGEGFRSRWTGNLDPAATLAAYAELKA AEPAGWRLAAAATTWSEVAALMTAAQRWGTEWATCSGMSMPASIEKLAAISDEDAPHRLEREFPELFERVAQLRARGLTH RAARLITEAIVSDARLAIVTADAPRIPSNFDSVWPVAADGRIDAADRAQFAEAVQQQWFSIGMVQPGWDDEPTGSACTEY RAQWLICRALEVVLGWIADGNSGAVPADLPMEDMIYAAAHAYLDGRGTGWITDLFDAAGA
Sequences:
>Translated_780_residues MAASLPARTYSRFIVAPDVWPTTREESEGRAAAQRHLATATAAAVDAHRVALHGLQAAGVAQSSGFEAMHAAYRRIQVRA DDKAEADGAAADLMQSVAAIQMSAELMIDTIDAEAHQQLVHVPSRSPIAIGIITGAAARTRATAVGAADEIRALTVQFGQ RFAPLPEGPPSGDPVGAGDDDRSTDKRSDESPERPPDAVVETGGTQTRHSAPDPPDANLSSGNNAPRVSTGPTPGSSSVS SQLSAQGTGPAYGAAVADIGSSGACLTGTGPWSSAGSMAALGGSASSLSGSGAGGMSHAGSVRPSASASSPSAVALQGVM HASAPAPLSSVAGTQTTTPAPFPAAASAAMQAPSPSGTSQPPIAATTGAVPVSIAGPQAVSSGGPHSPVAASLLPPGPLG PPPSASAAIAPATGAGPSVGGAHASMTPATASIAAAALTTPAATLPSRVAAAAARDLERQRNESSDLQMVKRLAWELLYA TETCRSFALWAVGLMYSATGDRLIVALTHHGAGYVPAGVEIRRGVRMLWSDQAIGEGFRSRWTGNLDPAATLAAYAELKA AEPAGWRLAAAATTWSEVAALMTAAQRWGTEWATCSGMSMPASIEKLAAISDEDAPHRLEREFPELFERVAQLRARGLTH RAARLITEAIVSDARLAIVTADAPRIPSNFDSVWPVAADGRIDAADRAQFAEAVQQQWFSIGMVQPGWDDEPTGSACTEY RAQWLICRALEVVLGWIADGNSGAVPADLPMEDMIYAAAHAYLDGRGTGWITDLFDAAGA >Mature_779_residues AASLPARTYSRFIVAPDVWPTTREESEGRAAAQRHLATATAAAVDAHRVALHGLQAAGVAQSSGFEAMHAAYRRIQVRAD DKAEADGAAADLMQSVAAIQMSAELMIDTIDAEAHQQLVHVPSRSPIAIGIITGAAARTRATAVGAADEIRALTVQFGQR FAPLPEGPPSGDPVGAGDDDRSTDKRSDESPERPPDAVVETGGTQTRHSAPDPPDANLSSGNNAPRVSTGPTPGSSSVSS QLSAQGTGPAYGAAVADIGSSGACLTGTGPWSSAGSMAALGGSASSLSGSGAGGMSHAGSVRPSASASSPSAVALQGVMH ASAPAPLSSVAGTQTTTPAPFPAAASAAMQAPSPSGTSQPPIAATTGAVPVSIAGPQAVSSGGPHSPVAASLLPPGPLGP PPSASAAIAPATGAGPSVGGAHASMTPATASIAAAALTTPAATLPSRVAAAAARDLERQRNESSDLQMVKRLAWELLYAT ETCRSFALWAVGLMYSATGDRLIVALTHHGAGYVPAGVEIRRGVRMLWSDQAIGEGFRSRWTGNLDPAATLAAYAELKAA EPAGWRLAAAATTWSEVAALMTAAQRWGTEWATCSGMSMPASIEKLAAISDEDAPHRLEREFPELFERVAQLRARGLTHR AARLITEAIVSDARLAIVTADAPRIPSNFDSVWPVAADGRIDAADRAQFAEAVQQQWFSIGMVQPGWDDEPTGSACTEYR AQWLICRALEVVLGWIADGNSGAVPADLPMEDMIYAAAHAYLDGRGTGWITDLFDAAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79472; Mature: 79341
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASLPARTYSRFIVAPDVWPTTREESEGRAAAQRHLATATAAAVDAHRVALHGLQAAGV CCCCCCCHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AQSSGFEAMHAAYRRIQVRADDKAEADGAAADLMQSVAAIQMSAELMIDTIDAEAHQQLV CCCCCHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHH HVPSRSPIAIGIITGAAARTRATAVGAADEIRALTVQFGQRFAPLPEGPPSGDPVGAGDD CCCCCCCEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC DRSTDKRSDESPERPPDAVVETGGTQTRHSAPDPPDANLSSGNNAPRVSTGPTPGSSSVS CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH SQLSAQGTGPAYGAAVADIGSSGACLTGTGPWSSAGSMAALGGSASSLSGSGAGGMSHAG HHHHCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC SVRPSASASSPSAVALQGVMHASAPAPLSSVAGTQTTTPAPFPAAASAAMQAPSPSGTSQ CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCC PPIAATTGAVPVSIAGPQAVSSGGPHSPVAASLLPPGPLGPPPSASAAIAPATGAGPSVG CCCEEECCCCEEEECCCHHHCCCCCCCCCEECCCCCCCCCCCCCCCCEECCCCCCCCCCC GAHASMTPATASIAAAALTTPAATLPSRVAAAAARDLERQRNESSDLQMVKRLAWELLYA CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH TETCRSFALWAVGLMYSATGDRLIVALTHHGAGYVPAGVEIRRGVRMLWSDQAIGEGFRS HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH RWTGNLDPAATLAAYAELKAAEPAGWRLAAAATTWSEVAALMTAAQRWGTEWATCSGMSM HCCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PASIEKLAAISDEDAPHRLEREFPELFERVAQLRARGLTHRAARLITEAIVSDARLAIVT CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEEE ADAPRIPSNFDSVWPVAADGRIDAADRAQFAEAVQQQWFSIGMVQPGWDDEPTGSACTEY CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH RAQWLICRALEVVLGWIADGNSGAVPADLPMEDMIYAAAHAYLDGRGTGWITDLFDAAGA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC >Mature Secondary Structure AASLPARTYSRFIVAPDVWPTTREESEGRAAAQRHLATATAAAVDAHRVALHGLQAAGV CCCCCCHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AQSSGFEAMHAAYRRIQVRADDKAEADGAAADLMQSVAAIQMSAELMIDTIDAEAHQQLV CCCCCHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHH HVPSRSPIAIGIITGAAARTRATAVGAADEIRALTVQFGQRFAPLPEGPPSGDPVGAGDD CCCCCCCEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC DRSTDKRSDESPERPPDAVVETGGTQTRHSAPDPPDANLSSGNNAPRVSTGPTPGSSSVS CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH SQLSAQGTGPAYGAAVADIGSSGACLTGTGPWSSAGSMAALGGSASSLSGSGAGGMSHAG HHHHCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC SVRPSASASSPSAVALQGVMHASAPAPLSSVAGTQTTTPAPFPAAASAAMQAPSPSGTSQ CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCC PPIAATTGAVPVSIAGPQAVSSGGPHSPVAASLLPPGPLGPPPSASAAIAPATGAGPSVG CCCEEECCCCEEEECCCHHHCCCCCCCCCEECCCCCCCCCCCCCCCCEECCCCCCCCCCC GAHASMTPATASIAAAALTTPAATLPSRVAAAAARDLERQRNESSDLQMVKRLAWELLYA CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH TETCRSFALWAVGLMYSATGDRLIVALTHHGAGYVPAGVEIRRGVRMLWSDQAIGEGFRS HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH RWTGNLDPAATLAAYAELKAAEPAGWRLAAAATTWSEVAALMTAAQRWGTEWATCSGMSM HCCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PASIEKLAAISDEDAPHRLEREFPELFERVAQLRARGLTHRAARLITEAIVSDARLAIVT CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEEE ADAPRIPSNFDSVWPVAADGRIDAADRAQFAEAVQQQWFSIGMVQPGWDDEPTGSACTEY CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH RAQWLICRALEVVLGWIADGNSGAVPADLPMEDMIYAAAHAYLDGRGTGWITDLFDAAGA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA