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The map label for this gene is tdcF [C]

Identifier: 108801783

GI number: 108801783

Start: 5103193

End: 5103681

Strand: Reverse

Name: tdcF [C]

Synonym: Mmcs_4820

Alternate gene names: 108801783

Gene position: 5103681-5103193 (Counterclockwise)

Preceding gene: 108801784

Following gene: 108801782

Centisome position: 89.45

GC content: 71.78

Gene sequence:

>489_bases
GTGAGCACCTGGGGCGAGCGCAGCGACGGGGGAAGATCATGGTCCGAGCGCCTGGCGGAGCTGGGCATCGAGCTTCCGGA
GGTCGTGGCGCCGCTCGCGGCCTACGTACCGGCCGTGCGAACCGGGAACCTGGTCTACACCGCCGGGCAGCTGCCGATCG
TCTCCGGTGAATTGACCCGCACCGGCAAGGTCGGCGCCGACGTCGACCCGGACGACGCCAAGGATCTCGCGCGGCTGTGC
GGCCTCAACGCGCTCGCCGCGGTCGACGCGCTCGTCGGCATCGACGCGGTCACCCGGGTGGTCAAGGTGGTCGGGTTCGT
CGCCTCGGCGCCCGGCTTCGGCGGTCAACCCGGTGTCGTCAACGGCGCATCGGAGTTGTTCGGCGAGGTGTTCGGCGACG
CCGGCGCGCACGCCCGATCCGCGGTCGGGGTGTCGGAGTTGCCGCGCAACGCCCCGGTCGAGGTCGAGATCGTCGTCGAG
GTCGGTTAG

Upstream 100 bases:

>100_bases
AACAGATCCTCGATCAGTGGGGCGCCGACGGCTGGGAGCTGGTCGCGGTGCTGCCCGGTCCGACCGGTGAGCAGCACGTC
GCCTATCTGAAGCGGCCCAA

Downstream 100 bases:

>100_bases
GGCGGTGAGCGCACCCGAGCATCCGGCATACGGGCTACTGCGCCCGGTGACCGAGACCGCCTCGGTGCTGTTGTGCAACA
ACCCGGGGCTGATGACGCTC

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Endoribonuclease; Endoribonuclease L-Psp; Transcription Regulator; Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; Endoribonuclease Family Protein; YjgF Family Translation Initiation Inhibitor; Endoribonuclease L-PSP Family; Transcriptional Regulator; 2-Aminomuconate Deaminase; YjgF-Family Protein; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF; L-PSP Family Endoribonuclease; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSTWGERSDGGRSWSERLAELGIELPEVVAPLAAYVPAVRTGNLVYTAGQLPIVSGELTRTGKVGADVDPDDAKDLARLC
GLNALAAVDALVGIDAVTRVVKVVGFVASAPGFGGQPGVVNGASELFGEVFGDAGAHARSAVGVSELPRNAPVEVEIVVE
VG

Sequences:

>Translated_162_residues
MSTWGERSDGGRSWSERLAELGIELPEVVAPLAAYVPAVRTGNLVYTAGQLPIVSGELTRTGKVGADVDPDDAKDLARLC
GLNALAAVDALVGIDAVTRVVKVVGFVASAPGFGGQPGVVNGASELFGEVFGDAGAHARSAVGVSELPRNAPVEVEIVVE
VG
>Mature_161_residues
STWGERSDGGRSWSERLAELGIELPEVVAPLAAYVPAVRTGNLVYTAGQLPIVSGELTRTGKVGADVDPDDAKDLARLCG
LNALAAVDALVGIDAVTRVVKVVGFVASAPGFGGQPGVVNGASELFGEVFGDAGAHARSAVGVSELPRNAPVEVEIVVEV
G

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16463; Mature: 16332

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTWGERSDGGRSWSERLAELGIELPEVVAPLAAYVPAVRTGNLVYTAGQLPIVSGELTR
CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEEECCCCCC
TGKVGADVDPDDAKDLARLCGLNALAAVDALVGIDAVTRVVKVVGFVASAPGFGGQPGVV
CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NGASELFGEVFGDAGAHARSAVGVSELPRNAPVEVEIVVEVG
CCHHHHHHHHHCCCCCHHHHHCCHHHCCCCCCCEEEEEEECC
>Mature Secondary Structure 
STWGERSDGGRSWSERLAELGIELPEVVAPLAAYVPAVRTGNLVYTAGQLPIVSGELTR
CCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEEECCCCCC
TGKVGADVDPDDAKDLARLCGLNALAAVDALVGIDAVTRVVKVVGFVASAPGFGGQPGVV
CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NGASELFGEVFGDAGAHARSAVGVSELPRNAPVEVEIVVEVG
CCHHHHHHHHHCCCCCHHHHHCCHHHCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA