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The map label for this gene is troA [H]

Identifier: 108801686

GI number: 108801686

Start: 5003067

End: 5003693

Strand: Reverse

Name: troA [H]

Synonym: Mmcs_4723

Alternate gene names: 108801686

Gene position: 5003693-5003067 (Counterclockwise)

Preceding gene: 108801687

Following gene: 108801685

Centisome position: 87.7

GC content: 69.54

Gene sequence:

>627_bases
GTGCAGACCGCCGCCGACGCCGGTGTGCCGACGTTGACGCTCGGCGACCACCTCGATCCGATCCGCTACGCACAGGGCGA
CACCGCGGGCGCACCGGATCCGCACTTCTGGATGGACCCGCAGCGGATGATCACCGCCGTCGACGTGATCGAGCAGGCCG
TCAGCCGGGCGGTCGACGGGGTCGACGTGGCGGTGGTCGCGCGCAACGCCGAACGCTACCGCGCCGAACTGCGGGCGCTC
GACGGGTCGATGTCGCTGAAGTTCAACGCGATCACCGAAGGCCGCAGGAAGCTGGTCACCAATCACCACGTGCTGGGCTA
CCTCGCCGACCGGTTCGGCTTCCAGGTCATCGGCGCCATCGTGCCGAGCGGCACCACGCTCGCCGCGCCCAGCCCGTCTG
ACCTCCAGTCGTTGGCCGGCGCGATCCGTTCGGCCCGGGTGCCTGCGGTCTTCGTCGACTCGTCGCAGCCCGAGCGGCTG
GCACACGTACTGGCCGAACAGGCCGGGGTCCATGTGCGGATCGTGGCCCTCTACACCGAATCTCTCGGTCCACCCGGCAC
TTCGGGCGCGACGTACCTCGACATGATACGCGCCAACGCCGACGCCATCGTCAACGGCCTGAGCTGA

Upstream 100 bases:

>100_bases
GCACTCGTTCGCGCCCTCCGCGCAGGAGGCCGCCGCACTGTCGACCGCGAGCCTCATCGTCGCCAACGGCCTGGGCCTCG
AGGAGGGGGTGGCCCGGCAC

Downstream 100 bases:

>100_bases
ACGCCGGCCATGAAGAAGTTCGGAGGAAGCAGTATGACAAATCCGCGGTGGATGTACCGGCTCGGCGCGACGACGGCGAC
CGTCGCTGCACTGGCGGGGT

Product: periplasmic solute binding protein

Products: NA

Alternate protein names: Tromp-1 [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MQTAADAGVPTLTLGDHLDPIRYAQGDTAGAPDPHFWMDPQRMITAVDVIEQAVSRAVDGVDVAVVARNAERYRAELRAL
DGSMSLKFNAITEGRRKLVTNHHVLGYLADRFGFQVIGAIVPSGTTLAAPSPSDLQSLAGAIRSARVPAVFVDSSQPERL
AHVLAEQAGVHVRIVALYTESLGPPGTSGATYLDMIRANADAIVNGLS

Sequences:

>Translated_208_residues
MQTAADAGVPTLTLGDHLDPIRYAQGDTAGAPDPHFWMDPQRMITAVDVIEQAVSRAVDGVDVAVVARNAERYRAELRAL
DGSMSLKFNAITEGRRKLVTNHHVLGYLADRFGFQVIGAIVPSGTTLAAPSPSDLQSLAGAIRSARVPAVFVDSSQPERL
AHVLAEQAGVHVRIVALYTESLGPPGTSGATYLDMIRANADAIVNGLS
>Mature_208_residues
MQTAADAGVPTLTLGDHLDPIRYAQGDTAGAPDPHFWMDPQRMITAVDVIEQAVSRAVDGVDVAVVARNAERYRAELRAL
DGSMSLKFNAITEGRRKLVTNHHVLGYLADRFGFQVIGAIVPSGTTLAAPSPSDLQSLAGAIRSARVPAVFVDSSQPERL
AHVLAEQAGVHVRIVALYTESLGPPGTSGATYLDMIRANADAIVNGLS

Specific function: Part of an ATP-driven transport system troABCD for zinc. Substrate-binding protein involved in the transport of zinc across the cytoplasmic membrane [H]

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006127
- InterPro:   IPR006129
- InterPro:   IPR006128 [H]

Pfam domain/function: PF01297 SBP_bac_9 [H]

EC number: NA

Molecular weight: Translated: 21994; Mature: 21994

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTAADAGVPTLTLGDHLDPIRYAQGDTAGAPDPHFWMDPQRMITAVDVIEQAVSRAVDG
CCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
VDVAVVARNAERYRAELRALDGSMSLKFNAITEGRRKLVTNHHVLGYLADRFGFQVIGAI
CEEEEEECCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VPSGTTLAAPSPSDLQSLAGAIRSARVPAVFVDSSQPERLAHVLAEQAGVHVRIVALYTE
CCCCCEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEEEEEC
SLGPPGTSGATYLDMIRANADAIVNGLS
CCCCCCCCCHHHHHHHHCCHHHHHCCCC
>Mature Secondary Structure
MQTAADAGVPTLTLGDHLDPIRYAQGDTAGAPDPHFWMDPQRMITAVDVIEQAVSRAVDG
CCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
VDVAVVARNAERYRAELRALDGSMSLKFNAITEGRRKLVTNHHVLGYLADRFGFQVIGAI
CEEEEEECCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VPSGTTLAAPSPSDLQSLAGAIRSARVPAVFVDSSQPERLAHVLAEQAGVHVRIVALYTE
CCCCCEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEEEEEC
SLGPPGTSGATYLDMIRANADAIVNGLS
CCCCCCCCCHHHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768866; 9332349; 9665876; 10400603; 10404217 [H]