| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801682
Identifier: 108801682
GI number: 108801682
Start: 4999335
End: 5000231
Strand: Reverse
Name: 108801682
Synonym: Mmcs_4719
Alternate gene names: NA
Gene position: 5000231-4999335 (Counterclockwise)
Preceding gene: 108801683
Following gene: 108801681
Centisome position: 87.64
GC content: 70.79
Gene sequence:
>897_bases ATGACCGCCTGCTCGGGAGGCGGCGATTCGGCGGCGCCGAGCGCGCAACCCGGCGGTGAGTGCCCGACGGAGCCGGTGTC GGTGGTGGTCAGTGTCGACCAGTGGGGTGGCATCGTCTCCCAGCTCGGCGGCCAGTGCGCCACGGTCTCCACCGTCGTCG CGAGTTCGTCGGTCGACCCGCACGACTTCGAACCCGCACCCAAGGACGCGGCGCTCTTCGAGGGTGCGCAACTGATCGTC GTCAACGGCGGCCACTACGACGAGTGGGCCTCCAAACTCGCCGAGGGATCGGCACCGGACGCACCGGTGATCGATGCGGC CGAGGTGAGCGCAGAGGCTGCCGACGTCGGCGCGGACATGCACGCTGCAAACCCGCACATCTGGTACAGCCCCGCCGCGG TGACGGCGGTCGCCGATGCGGTCACCGCGGAACTCGGCAGGCTCGCACCCGATGCGGCGGACTACTTCACCGAACGCCAG GCCGAGTTCGGCGATGCGCTCGCGCCCTACCACCAGGTCATCGGATCCATCAAAGCCACCGCCGCAGGCAAGACCTACGC CGCCACCGAGAACGTCTTCGACGACATGGCCGCCGCCGTCGGGCTGACGAACCGCACCCCGCCCGGCTACCAGGCCACCG CCGCGAACGAGAGCGACCCCTCACCCGCCGATCTGGACGCGTTCCTGCGCCTGCTGGGCGACCGCGGCGTCGACGTCCTC ATCTACAACGTCCAGACCGAAGGGTCTGTCCCACAACAGATCCGGGCCGCCGCCGAACGGGCCGGGGTGCCGGTCGTCGA GGTGACGGAGTCCGTGCCGCCCGGTGCCGCGTCGTTCCAGGCCTGGCAGGTCGACCAACTCTCGGCGCTGGCCGAGGCGC TCGGTGTCGGCGGCTGA
Upstream 100 bases:
>100_bases AATCGCACCTGGAAATGCAAACCGTTATCATTAACGGGTGCGACTGAAACTTCGACGTGTGTTGACGACCGGTTTCGCGG CGGCCGCAGTGCCCCTCGCG
Downstream 100 bases:
>100_bases GCCGGCGCTGACGTTCCGCGACGTCAGCGTGGTCAGGGGGCGTCACACGGTCTGGTCGCAGGCCGACTTCGACGTTCCCG CGGGCGGTGTCGTCGCGGTC
Product: periplasmic solute binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MTACSGGGDSAAPSAQPGGECPTEPVSVVVSVDQWGGIVSQLGGQCATVSTVVASSSVDPHDFEPAPKDAALFEGAQLIV VNGGHYDEWASKLAEGSAPDAPVIDAAEVSAEAADVGADMHAANPHIWYSPAAVTAVADAVTAELGRLAPDAADYFTERQ AEFGDALAPYHQVIGSIKATAAGKTYAATENVFDDMAAAVGLTNRTPPGYQATAANESDPSPADLDAFLRLLGDRGVDVL IYNVQTEGSVPQQIRAAAERAGVPVVEVTESVPPGAASFQAWQVDQLSALAEALGVGG
Sequences:
>Translated_298_residues MTACSGGGDSAAPSAQPGGECPTEPVSVVVSVDQWGGIVSQLGGQCATVSTVVASSSVDPHDFEPAPKDAALFEGAQLIV VNGGHYDEWASKLAEGSAPDAPVIDAAEVSAEAADVGADMHAANPHIWYSPAAVTAVADAVTAELGRLAPDAADYFTERQ AEFGDALAPYHQVIGSIKATAAGKTYAATENVFDDMAAAVGLTNRTPPGYQATAANESDPSPADLDAFLRLLGDRGVDVL IYNVQTEGSVPQQIRAAAERAGVPVVEVTESVPPGAASFQAWQVDQLSALAEALGVGG >Mature_297_residues TACSGGGDSAAPSAQPGGECPTEPVSVVVSVDQWGGIVSQLGGQCATVSTVVASSSVDPHDFEPAPKDAALFEGAQLIVV NGGHYDEWASKLAEGSAPDAPVIDAAEVSAEAADVGADMHAANPHIWYSPAAVTAVADAVTAELGRLAPDAADYFTERQA EFGDALAPYHQVIGSIKATAAGKTYAATENVFDDMAAAVGLTNRTPPGYQATAANESDPSPADLDAFLRLLGDRGVDVLI YNVQTEGSVPQQIRAAAERAGVPVVEVTESVPPGAASFQAWQVDQLSALAEALGVGG
Specific function: Unknown
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30186; Mature: 30055
Theoretical pI: Translated: 3.83; Mature: 3.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTACSGGGDSAAPSAQPGGECPTEPVSVVVSVDQWGGIVSQLGGQCATVSTVVASSSVDP CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHCCCHHHHHHHHHCCCCCC HDFEPAPKDAALFEGAQLIVVNGGHYDEWASKLAEGSAPDAPVIDAAEVSAEAADVGADM CCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC HAANPHIWYSPAAVTAVADAVTAELGRLAPDAADYFTERQAEFGDALAPYHQVIGSIKAT CCCCCCEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGKTYAATENVFDDMAAAVGLTNRTPPGYQATAANESDPSPADLDAFLRLLGDRGVDVL CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCEEE IYNVQTEGSVPQQIRAAAERAGVPVVEVTESVPPGAASFQAWQVDQLSALAEALGVGG EEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TACSGGGDSAAPSAQPGGECPTEPVSVVVSVDQWGGIVSQLGGQCATVSTVVASSSVDP CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHCCCHHHHHHHHHCCCCCC HDFEPAPKDAALFEGAQLIVVNGGHYDEWASKLAEGSAPDAPVIDAAEVSAEAADVGADM CCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC HAANPHIWYSPAAVTAVADAVTAELGRLAPDAADYFTERQAEFGDALAPYHQVIGSIKAT CCCCCCEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGKTYAATENVFDDMAAAVGLTNRTPPGYQATAANESDPSPADLDAFLRLLGDRGVDVL CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCEEE IYNVQTEGSVPQQIRAAAERAGVPVVEVTESVPPGAASFQAWQVDQLSALAEALGVGG EEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA