Click here to switch to the map view.

The map label for this gene is bbsG [H]

Identifier: 108801675

GI number: 108801675

Start: 4991878

End: 4994031

Strand: Reverse

Name: bbsG [H]

Synonym: Mmcs_4712

Alternate gene names: 108801675

Gene position: 4994031-4991878 (Counterclockwise)

Preceding gene: 108801679

Following gene: 108801672

Centisome position: 87.53

GC content: 71.54

Gene sequence:

>2154_bases
ATGACCCAGTCAGTGCTGTCGGGGTCCGGCCCCGGTACCGACGAGCAGTTTGCTGCCCGGGAGATGGTGCGCGATTGGGC
CGCGGCGTCGCGGGCGTCCGAAGCCGCCCGCGAGGTCGAGCAGGGCGATGCGGACGCCTGGCGCCGGGCGTATTCGGGCC
TGGCGGAACTCGGCATCTTCGGGGTGGCGATCCCGGAGGATCAGGGTGGCGCCGGCGGCACCGTCGCCGACCTGTGCGCG
ATGGTCGACGAGGCCGCCGCGGCCATGGTGCCCGGACCGGTGGCGACGACGGCGCTGGCGACGCTGGTGGTCGCCGACGC
CGACCTGCTGGAGGCGCTGGCGTCCGGGGAACGCACCGCCGGCCTCACGCTGACGGCGGAGCTGACCCTCGACGGCGGGA
CGGCCTCCGGCGTCGCGCCGCACGTGCTGGGCGCCGACCCCACCGGGCTGCTGCTGCTGCCGGCCGGTGATGCGGTCGTC
CTCGTCGACGCGACCGCCGACGGGGTGACGGTCGAACCGCTGACCGCCACGGACTTCTCCCGTCCGCTGGCCCGGGTGGT
GCTCGACAACGCACCCGTCGTCACGCTCGACGTCACCGCCGAGCGGCTGGCGGATCTCACCGCGACACTGCTCGCCGCCG
AGGCGGCCGGTCTGGCCCGGTGGCAACTGGTCACCGCGACCGAGTACGCCAAGGTGCGCGAACAGTTCGGCAAGCCGATC
GGCAGCTTCCAGGCGATCAAGCACATGTGCGCGGAGATGCTGCTGCGCGCCGAACAGGTCTCGGTGGCCTCGGCGGACGC
GGCGCGCGCGGTCACCGAGGGCGACGAGCGGCAGCTGAGCATCGCGGCCGCGGTCGCCGCGGCCGCGGGGATCGACGCGG
CGGAGGCCAACGCCAAGGACTGCATTCAGGTGCTGGGCGGTATCGGGATCACCTGGGAACACGACGCACACCTGTATCTG
CGTCGGGCGTACGGGATTTCGCAGGCTCTCGGTGGCCGCTCGCGGTGGCTGCGCCGCATCGCGGACCTGACCCAGCAGGG
GGTGCGTCGCGAGTTGCGGATCGACCTCGACTCGGTCGAGGGGCTGCGGCCCGAGATCCGTGCCGCGGTCGCCGAGATCG
CGAAGCTTCCTGCCGAACGGCGTCAGCCCGCGCTCGCCGAGGCGGGTCTGCTCGCGCCGCACTGGCCGAAACCGTTCGGC
CGGGCGGCGTCGGCGGCCGAGCAGCTGCTGATCGATCAGGAGCTCGCCGAAGCGCAGGTGCAGCGGCCCGACCTCGTGAT
CGGCTGGTGGGCAGCGCCGACGATCCTCGAACACGGCAGCCCCGAGCAGATCGAGCAGTTCGTCCCCGCCACCCTGAGCG
GTGAGCTGTCCTGGTGCCAGCTGTTCAGCGAACCGGGTGCCGGCTCGGACCTGGCCGCACTGCGCACGAAAGCCGTTCGG
GCCGAAGGCGTGTCCGCGAGCGGCACAAAGAGCTCCGGTTGGCGGCTGACCGGGCAGAAGGTGTGGACGTCGGCGGCACA
CAAGGCGCACTGGGGAGTCTGCCTGGCGCGCACCGATCCGGACGCCCCGAAACACAAGGGCATCACGTACTTCCTCATCG
ACATGAAGAGCCCGGGCATCGTGATCCGCCCGCTGCGCGAGATCACCGGCGACGAACTGTTCAACGAGGTGTTCTTCGAC
GACGTCTTCGTGCCCGACGAGATGGTCGTCGGAAAGGTCAACGACGGGTGGCGGTTGGCGCGCACCACGCTGGCCAACGA
GCGGATCGCGATGGCCGGCGGCACCGCGTTGGGCAACCCGATGGAGGAGCTGCTGCGCACCGTGGCCGAACATGGGCTCG
ACGCGGCCGATCAGGACCGGCTCGGCCGGCTGATCCTCACCGCGCAGGTGGGCTCGTTGCTCGATCAGCGGATCGCGCAG
AAGGCCGTGGGTGGGCAGGACCCGGGTGCGGAATCCAGCGCCCGCAAGCTGATCGGCGTGCGGTACCGGCAGGGGCTGGC
GGAGTTCCGGATGGATCTGTCCGACGGGGCAGGCGCCGTGGTCAACCAGCAGGTGCACGACTTCCTGAACACGCGTTGCC
TGACCATCGCTGGCGGCACGGAGCAGATCCTGCTGACCCTGGCCGGCGAGCGTCTGCTGGGCCTGCCCCGGTAG

Upstream 100 bases:

>100_bases
CTGCTGCGATGCCGGTCGACTTGACGGTCGAACACTGTCACCATTAGAACACGTTCTAGTGAGGAGTATGGCCTTCTCAC
CCAAGGCTAGGAGTCCGGAA

Downstream 100 bases:

>100_bases
GTCAGCCGAAGGTGGTCTGCGCGCAGGCGTCCGGGGTGGTCAGGTTCACCCCGCCGTAGACCACCTGGATGTGACTGCAC
ACGATGAACGCCGCCCGCGT

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 717; Mature: 716

Protein sequence:

>717_residues
MTQSVLSGSGPGTDEQFAAREMVRDWAAASRASEAAREVEQGDADAWRRAYSGLAELGIFGVAIPEDQGGAGGTVADLCA
MVDEAAAAMVPGPVATTALATLVVADADLLEALASGERTAGLTLTAELTLDGGTASGVAPHVLGADPTGLLLLPAGDAVV
LVDATADGVTVEPLTATDFSRPLARVVLDNAPVVTLDVTAERLADLTATLLAAEAAGLARWQLVTATEYAKVREQFGKPI
GSFQAIKHMCAEMLLRAEQVSVASADAARAVTEGDERQLSIAAAVAAAAGIDAAEANAKDCIQVLGGIGITWEHDAHLYL
RRAYGISQALGGRSRWLRRIADLTQQGVRRELRIDLDSVEGLRPEIRAAVAEIAKLPAERRQPALAEAGLLAPHWPKPFG
RAASAAEQLLIDQELAEAQVQRPDLVIGWWAAPTILEHGSPEQIEQFVPATLSGELSWCQLFSEPGAGSDLAALRTKAVR
AEGVSASGTKSSGWRLTGQKVWTSAAHKAHWGVCLARTDPDAPKHKGITYFLIDMKSPGIVIRPLREITGDELFNEVFFD
DVFVPDEMVVGKVNDGWRLARTTLANERIAMAGGTALGNPMEELLRTVAEHGLDAADQDRLGRLILTAQVGSLLDQRIAQ
KAVGGQDPGAESSARKLIGVRYRQGLAEFRMDLSDGAGAVVNQQVHDFLNTRCLTIAGGTEQILLTLAGERLLGLPR

Sequences:

>Translated_717_residues
MTQSVLSGSGPGTDEQFAAREMVRDWAAASRASEAAREVEQGDADAWRRAYSGLAELGIFGVAIPEDQGGAGGTVADLCA
MVDEAAAAMVPGPVATTALATLVVADADLLEALASGERTAGLTLTAELTLDGGTASGVAPHVLGADPTGLLLLPAGDAVV
LVDATADGVTVEPLTATDFSRPLARVVLDNAPVVTLDVTAERLADLTATLLAAEAAGLARWQLVTATEYAKVREQFGKPI
GSFQAIKHMCAEMLLRAEQVSVASADAARAVTEGDERQLSIAAAVAAAAGIDAAEANAKDCIQVLGGIGITWEHDAHLYL
RRAYGISQALGGRSRWLRRIADLTQQGVRRELRIDLDSVEGLRPEIRAAVAEIAKLPAERRQPALAEAGLLAPHWPKPFG
RAASAAEQLLIDQELAEAQVQRPDLVIGWWAAPTILEHGSPEQIEQFVPATLSGELSWCQLFSEPGAGSDLAALRTKAVR
AEGVSASGTKSSGWRLTGQKVWTSAAHKAHWGVCLARTDPDAPKHKGITYFLIDMKSPGIVIRPLREITGDELFNEVFFD
DVFVPDEMVVGKVNDGWRLARTTLANERIAMAGGTALGNPMEELLRTVAEHGLDAADQDRLGRLILTAQVGSLLDQRIAQ
KAVGGQDPGAESSARKLIGVRYRQGLAEFRMDLSDGAGAVVNQQVHDFLNTRCLTIAGGTEQILLTLAGERLLGLPR
>Mature_716_residues
TQSVLSGSGPGTDEQFAAREMVRDWAAASRASEAAREVEQGDADAWRRAYSGLAELGIFGVAIPEDQGGAGGTVADLCAM
VDEAAAAMVPGPVATTALATLVVADADLLEALASGERTAGLTLTAELTLDGGTASGVAPHVLGADPTGLLLLPAGDAVVL
VDATADGVTVEPLTATDFSRPLARVVLDNAPVVTLDVTAERLADLTATLLAAEAAGLARWQLVTATEYAKVREQFGKPIG
SFQAIKHMCAEMLLRAEQVSVASADAARAVTEGDERQLSIAAAVAAAAGIDAAEANAKDCIQVLGGIGITWEHDAHLYLR
RAYGISQALGGRSRWLRRIADLTQQGVRRELRIDLDSVEGLRPEIRAAVAEIAKLPAERRQPALAEAGLLAPHWPKPFGR
AASAAEQLLIDQELAEAQVQRPDLVIGWWAAPTILEHGSPEQIEQFVPATLSGELSWCQLFSEPGAGSDLAALRTKAVRA
EGVSASGTKSSGWRLTGQKVWTSAAHKAHWGVCLARTDPDAPKHKGITYFLIDMKSPGIVIRPLREITGDELFNEVFFDD
VFVPDEMVVGKVNDGWRLARTTLANERIAMAGGTALGNPMEELLRTVAEHGLDAADQDRLGRLILTAQVGSLLDQRIAQK
AVGGQDPGAESSARKLIGVRYRQGLAEFRMDLSDGAGAVVNQQVHDFLNTRCLTIAGGTEQILLTLAGERLLGLPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557235, Length=290, Percent_Identity=29.3103448275862, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI76496475, Length=290, Percent_Identity=29.3103448275862, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI4557233, Length=202, Percent_Identity=34.1584158415842, Blast_Score=82, Evalue=3e-15,
Organism=Homo sapiens, GI187960098, Length=267, Percent_Identity=28.4644194756554, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI4557231, Length=267, Percent_Identity=28.4644194756554, Blast_Score=81, Evalue=4e-15,
Organism=Homo sapiens, GI4501859, Length=206, Percent_Identity=32.0388349514563, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI226958414, Length=236, Percent_Identity=27.1186440677966, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI226958412, Length=285, Percent_Identity=25.2631578947368, Blast_Score=74, Evalue=7e-13,
Organism=Homo sapiens, GI4501857, Length=161, Percent_Identity=31.055900621118, Blast_Score=73, Evalue=8e-13,
Organism=Escherichia coli, GI87081958, Length=360, Percent_Identity=26.1111111111111, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1786223, Length=170, Percent_Identity=28.2352941176471, Blast_Score=67, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17506239, Length=211, Percent_Identity=28.9099526066351, Blast_Score=76, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17538396, Length=201, Percent_Identity=29.8507462686567, Blast_Score=76, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17569725, Length=221, Percent_Identity=28.5067873303167, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17570075, Length=176, Percent_Identity=32.3863636363636, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI32563615, Length=207, Percent_Identity=28.0193236714976, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17534899, Length=157, Percent_Identity=32.484076433121, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17551932, Length=292, Percent_Identity=23.6301369863014, Blast_Score=66, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17505929, Length=292, Percent_Identity=23.2876712328767, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI281363737, Length=183, Percent_Identity=31.1475409836066, Blast_Score=87, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24660351, Length=168, Percent_Identity=32.1428571428571, Blast_Score=76, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24646207, Length=160, Percent_Identity=31.875, Blast_Score=74, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24666513, Length=160, Percent_Identity=28.125, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356377, Length=166, Percent_Identity=30.1204819277108, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 75648; Mature: 75516

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSVLSGSGPGTDEQFAAREMVRDWAAASRASEAAREVEQGDADAWRRAYSGLAELGIF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEE
GVAIPEDQGGAGGTVADLCAMVDEAAAAMVPGPVATTALATLVVADADLLEALASGERTA
EEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GLTLTAELTLDGGTASGVAPHVLGADPTGLLLLPAGDAVVLVDATADGVTVEPLTATDFS
CEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCEEECCCCCCHHH
RPLARVVLDNAPVVTLDVTAERLADLTATLLAAEAAGLARWQLVTATEYAKVREQFGKPI
HHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCC
GSFQAIKHMCAEMLLRAEQVSVASADAARAVTEGDERQLSIAAAVAAAAGIDAAEANAKD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCCHHH
CIQVLGGIGITWEHDAHLYLRRAYGISQALGGRSRWLRRIADLTQQGVRRELRIDLDSVE
HHHHHCCCCCEEECCCCEEHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHC
GLRPEIRAAVAEIAKLPAERRQPALAEAGLLAPHWPKPFGRAASAAEQLLIDQELAEAQV
CCCHHHHHHHHHHHHCCHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QRPDLVIGWWAAPTILEHGSPEQIEQFVPATLSGELSWCQLFSEPGAGSDLAALRTKAVR
CCCCEEEEECCCHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH
AEGVSASGTKSSGWRLTGQKVWTSAAHKAHWGVCLARTDPDAPKHKGITYFLIDMKSPGI
HCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEEECCCCE
VIRPLREITGDELFNEVFFDDVFVPDEMVVGKVNDGWRLARTTLANERIAMAGGTALGNP
EEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCCCH
MEELLRTVAEHGLDAADQDRLGRLILTAQVGSLLDQRIAQKAVGGQDPGAESSARKLIGV
HHHHHHHHHHCCCCCCCHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
RYRQGLAEFRMDLSDGAGAVVNQQVHDFLNTRCLTIAGGTEQILLTLAGERLLGLPR
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEECCHHHCCCCC
>Mature Secondary Structure 
TQSVLSGSGPGTDEQFAAREMVRDWAAASRASEAAREVEQGDADAWRRAYSGLAELGIF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEE
GVAIPEDQGGAGGTVADLCAMVDEAAAAMVPGPVATTALATLVVADADLLEALASGERTA
EEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GLTLTAELTLDGGTASGVAPHVLGADPTGLLLLPAGDAVVLVDATADGVTVEPLTATDFS
CEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCEEECCCCCCHHH
RPLARVVLDNAPVVTLDVTAERLADLTATLLAAEAAGLARWQLVTATEYAKVREQFGKPI
HHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCC
GSFQAIKHMCAEMLLRAEQVSVASADAARAVTEGDERQLSIAAAVAAAAGIDAAEANAKD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCCHHH
CIQVLGGIGITWEHDAHLYLRRAYGISQALGGRSRWLRRIADLTQQGVRRELRIDLDSVE
HHHHHCCCCCEEECCCCEEHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHC
GLRPEIRAAVAEIAKLPAERRQPALAEAGLLAPHWPKPFGRAASAAEQLLIDQELAEAQV
CCCHHHHHHHHHHHHCCHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QRPDLVIGWWAAPTILEHGSPEQIEQFVPATLSGELSWCQLFSEPGAGSDLAALRTKAVR
CCCCEEEEECCCHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH
AEGVSASGTKSSGWRLTGQKVWTSAAHKAHWGVCLARTDPDAPKHKGITYFLIDMKSPGI
HCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEEECCCCE
VIRPLREITGDELFNEVFFDDVFVPDEMVVGKVNDGWRLARTTLANERIAMAGGTALGNP
EEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCCCH
MEELLRTVAEHGLDAADQDRLGRLILTAQVGSLLDQRIAQKAVGGQDPGAESSARKLIGV
HHHHHHHHHHCCCCCCCHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
RYRQGLAEFRMDLSDGAGAVVNQQVHDFLNTRCLTIAGGTEQILLTLAGERLLGLPR
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEECCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]