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The map label for this gene is hsaA [H]

Identifier: 108801672

GI number: 108801672

Start: 4988881

End: 4990065

Strand: Reverse

Name: hsaA [H]

Synonym: Mmcs_4709

Alternate gene names: 108801672

Gene position: 4990065-4988881 (Counterclockwise)

Preceding gene: 108801675

Following gene: 108801671

Centisome position: 87.46

GC content: 67.93

Gene sequence:

>1185_bases
GTGACGTCCATTGAACAGCGCGACGCGCAGGCGGTCCTCAGCGGTATCGACGACCTCCTGCCCACGTTGCGTCAACGTGC
GCAGGAGGCCGAAGATCTGCGCCGCCTGCCCGACGAGACGGTGAAGGATCTCGACGAGATCGGCTTCTTCAAGCTGCTCC
AACCCCAGCAGTGGGGCGGTATGCAGTGCGATCCGTCGCTGTTCTACGAAGCGGTGCGCCGCCTCGGCAGCGCGTGCGGG
TCGACCGGTTGGGTCGCCTCGATCATCGGCGTGCACAACTGGCACCTGGCGCTGTTCGACCAGAAGGCCCAGGACGAGGT
CTGGGGCGACGATCCGTCGGTGCGGGTGTCGTCGTCGTACGCGCCGATGGGTGCGGGCACCGTGGTCGACGGCGGGTACC
GGGTCAGCGGCGCCTGGCAGTGGTCCTCCGGATGCGATCACGCCACCTGGGCGTTCCTCGGCGGCCCGGTGATCAAGGAC
GGCAAGCCCGTCGACTTCGGCAGCTTCCTGATCCCGCGCAGCGAGTACCGCATCGACGACGTGTGGAATGTGGTCGGGCT
CAAGGGCACCGGCAGCAACACCGTCGTCGTCGAGGATGTCTTCGTCCCGCGGCACCGCTTCCTGTCCTACAAGGCGATGA
ACGACGGCACCGCAGGCGGATTCGAGAACAACACCGCCCCGGTGTACAAGATGCCCTGGGGCACAATGCATCCCACGACC
ATCAGCGCGCCGATCATGGGTATGGCCTACGGCGCCTACGAAGCCCACGTCGAACATCAGGGCAAGCGGGTGCGCGCCGC
GTTCGCCGGCGAGAAGTCCAAGGACGACCCGTTCGCCAAGATCCGCATCGCCGAAGCCGCCAGTGACATCGACGCCGGCT
GGCGTCAGCTGATCGGCAACGTCGGCGAGGAGTACGCACTTCTGGCCGCCGGCAAGGAGATCCCGTTCGAGCTGCGCGCC
AGGGCCCGCCGCGACCAGGTGCGCGCCACCGCCCGCGCCATCGCCTCCATCGACCTGCTGTTCGAGGCGTCCGGTGCCAC
GGCGCTGGGTATCGACCAGCCCGTGCAGCGGTTCTGGCGTGACGCACACGCCGGCCGCGTCCACGCCGCCAACGAACCCG
AGCGGGCCTACCTGATCTTCGGCAACGACGCGTTCGGGTTGCCGCCGCAGGACACGATGGTCTGA

Upstream 100 bases:

>100_bases
GCAGGTCCAGCCGCTGCAGCGTCACGCTGCTCGACACAAATCGTAACGTGTTCTAATCTTTCTACAGCCCCGTTTCAGTC
CCGCATCTTGGAGGCAGGCA

Downstream 100 bases:

>100_bases
TCTTCCGAGATGACGTCCTACATCAAACAGACCGAGTCGCAGGTCGAGATCACCTTCGAGTCCACCTCGCGGTTTGCGGA
AGTAAGCGGCAAGGGTCCTG

Product: acyl-CoA dehydrogenase, type 2-like protein

Products: NA

Alternate protein names: 3-hydroxy-9,10-seconandrost-1,3,5(10)-triene-9,17-dione 4-hydroxylase [H]

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MTSIEQRDAQAVLSGIDDLLPTLRQRAQEAEDLRRLPDETVKDLDEIGFFKLLQPQQWGGMQCDPSLFYEAVRRLGSACG
STGWVASIIGVHNWHLALFDQKAQDEVWGDDPSVRVSSSYAPMGAGTVVDGGYRVSGAWQWSSGCDHATWAFLGGPVIKD
GKPVDFGSFLIPRSEYRIDDVWNVVGLKGTGSNTVVVEDVFVPRHRFLSYKAMNDGTAGGFENNTAPVYKMPWGTMHPTT
ISAPIMGMAYGAYEAHVEHQGKRVRAAFAGEKSKDDPFAKIRIAEAASDIDAGWRQLIGNVGEEYALLAAGKEIPFELRA
RARRDQVRATARAIASIDLLFEASGATALGIDQPVQRFWRDAHAGRVHAANEPERAYLIFGNDAFGLPPQDTMV

Sequences:

>Translated_394_residues
MTSIEQRDAQAVLSGIDDLLPTLRQRAQEAEDLRRLPDETVKDLDEIGFFKLLQPQQWGGMQCDPSLFYEAVRRLGSACG
STGWVASIIGVHNWHLALFDQKAQDEVWGDDPSVRVSSSYAPMGAGTVVDGGYRVSGAWQWSSGCDHATWAFLGGPVIKD
GKPVDFGSFLIPRSEYRIDDVWNVVGLKGTGSNTVVVEDVFVPRHRFLSYKAMNDGTAGGFENNTAPVYKMPWGTMHPTT
ISAPIMGMAYGAYEAHVEHQGKRVRAAFAGEKSKDDPFAKIRIAEAASDIDAGWRQLIGNVGEEYALLAAGKEIPFELRA
RARRDQVRATARAIASIDLLFEASGATALGIDQPVQRFWRDAHAGRVHAANEPERAYLIFGNDAFGLPPQDTMV
>Mature_393_residues
TSIEQRDAQAVLSGIDDLLPTLRQRAQEAEDLRRLPDETVKDLDEIGFFKLLQPQQWGGMQCDPSLFYEAVRRLGSACGS
TGWVASIIGVHNWHLALFDQKAQDEVWGDDPSVRVSSSYAPMGAGTVVDGGYRVSGAWQWSSGCDHATWAFLGGPVIKDG
KPVDFGSFLIPRSEYRIDDVWNVVGLKGTGSNTVVVEDVFVPRHRFLSYKAMNDGTAGGFENNTAPVYKMPWGTMHPTTI
SAPIMGMAYGAYEAHVEHQGKRVRAAFAGEKSKDDPFAKIRIAEAASDIDAGWRQLIGNVGEEYALLAAGKEIPFELRAR
ARRDQVRATARAIASIDLLFEASGATALGIDQPVQRFWRDAHAGRVHAANEPERAYLIFGNDAFGLPPQDTMV

Specific function: Catalyzes the o-hydroxylation of 3-hydroxy-9,10- seconandrost-1,3,5(10)-triene-9,17-dione (3-HSA) to 3,4-dihydroxy- 9,10-seconandrost-1,3,5(10)-triene-9,17-dione (3,4-DHSA) in the catabolism of cholesterol. Also catalyzes the o-hydroxylation of a range of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FADH(2)-utilizing monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43186; Mature: 43055

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIEQRDAQAVLSGIDDLLPTLRQRAQEAEDLRRLPDETVKDLDEIGFFKLLQPQQWGG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHEECCCCCCCC
MQCDPSLFYEAVRRLGSACGSTGWVASIIGVHNWHLALFDQKAQDEVWGDDPSVRVSSSY
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEECCCCCHHCCCCCCCEEEECCC
APMGAGTVVDGGYRVSGAWQWSSGCDHATWAFLGGPVIKDGKPVDFGSFLIPRSEYRIDD
CCCCCCEEECCCEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCEECCCCCCCHHH
VWNVVGLKGTGSNTVVVEDVFVPRHRFLSYKAMNDGTAGGFENNTAPVYKMPWGTMHPTT
HHHEEEECCCCCCEEEEEEEECCHHHHEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCC
ISAPIMGMAYGAYEAHVEHQGKRVRAAFAGEKSKDDPFAKIRIAEAASDIDAGWRQLIGN
CCCCHHHHHHCHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
VGEEYALLAAGKEIPFELRARARRDQVRATARAIASIDLLFEASGATALGIDQPVQRFWR
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEECCCHHHHHHHH
DAHAGRVHAANEPERAYLIFGNDAFGLPPQDTMV
HHCCCEEECCCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
TSIEQRDAQAVLSGIDDLLPTLRQRAQEAEDLRRLPDETVKDLDEIGFFKLLQPQQWGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHEECCCCCCCC
MQCDPSLFYEAVRRLGSACGSTGWVASIIGVHNWHLALFDQKAQDEVWGDDPSVRVSSSY
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEECCCCCHHCCCCCCCEEEECCC
APMGAGTVVDGGYRVSGAWQWSSGCDHATWAFLGGPVIKDGKPVDFGSFLIPRSEYRIDD
CCCCCCEEECCCEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCEECCCCCCCHHH
VWNVVGLKGTGSNTVVVEDVFVPRHRFLSYKAMNDGTAGGFENNTAPVYKMPWGTMHPTT
HHHEEEECCCCCCEEEEEEEECCHHHHEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCC
ISAPIMGMAYGAYEAHVEHQGKRVRAAFAGEKSKDDPFAKIRIAEAASDIDAGWRQLIGN
CCCCHHHHHHCHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
VGEEYALLAAGKEIPFELRARARRDQVRATARAIASIDLLFEASGATALGIDQPVQRFWR
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEECCCHHHHHHHH
DAHAGRVHAANEPERAYLIFGNDAFGLPPQDTMV
HHCCCEEECCCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]