| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801630
Identifier: 108801630
GI number: 108801630
Start: 4946316
End: 4947698
Strand: Reverse
Name: 108801630
Synonym: Mmcs_4667
Alternate gene names: NA
Gene position: 4947698-4946316 (Counterclockwise)
Preceding gene: 108801632
Following gene: 108801628
Centisome position: 86.72
GC content: 63.77
Gene sequence:
>1383_bases ATGGAAAATAGCGCTGATCGTTCTCACGATTGCGAGGACCGGCCCGACATCGGCCGATTCTTGGCGCGTGCGAATCCGGG TGAATCCGTCGCTACCGCACAGCCATGCGATATTCGCCTCACACGCGCAGATGTCGACGCGGCGATCGCTCTGGGCGGGC GATACCTCGTCTCGGCCCAGCGGGAGGACGGCAGCTTCGTCTACGAGGTCGACTGGATGACGGGGGAGGAGTCGGCGGAT GACAACGTCGTCCGCCAAGCCGGCGCAACCTGGGGTGTCGCATTGCTGCACCGAGAGACGCGCGAACCCGATCATCGGGC CGCCGTGGACCGATCGCTTAGAAAGTGGGATACCGCGGTACGGGAGATCGATGGTCGGCGCTGGCTGGCCGATGGGGAGT TCAGGTCAGGGAAGCTCGGCGCCGTCGCTCTGATCGGCCTCTCCCTGCTCGAGCGCCTTGCTGTCCCAGAGGGTCTCGAT GACCCTGCGCGGATGCGCGCCTCGCTCGACGCGCTCTGCCGATTCGTCGAGGATGCCCGGTCGCCCAGTGGAGGATTTCA GAAGGCGTTCGACACCAGAACTGGAAACCACTCCGGCGCCGCGGATCCGTACTCTTCTGGTGAAGCGCTTCTGCTACTCG CGCGCAGCGGTATCGAACTCGGTGAGCCCGATCGACTGGAACGGGCACTCGCTTGGGCTGAGGAGGACTATCACGAGTTC GTCGTGCGTCCGCTCGCCGACGAACCGGACCCAGATGTCACTAAAGGCTATTACCAGTGGGGGTCGATGACTTGGTTCGC TTTCGCGACTGCCGGGCACGCTCCGGAGACTTGGGGTCGCCGCCTTATCGAGCAAGCGTTGTGGATGGTCGACGTGCACC GCACGTTGTCCCGCAAACGGAACACCGGGTACGCCTACGAAGGGATCGTGCCAGCATGGGAGTGGGCTCGTCGCACAGGC AACGAAGACACCGCCCGTAAGCTCGCATGCGTCGTGCACCAGGGGCTCCGCAAGCTCTGTGCGTGGCAACTCGGGCACCC ACTCGCGTCATCTGCGTTACGGTCTGCGCCGGAACAGTTTCATGGGGCGGTCCAAAACCACGCGCGCCAGTCCGCGCTAC GTATCGACGTCACCCAGCACCAACTCCACGCGCTGATGTATGCGCGGCGATTCAGCGTCGATGCAGCCGAGCATTTGTGC GCGACGGACATCTCGGCGGCGCCGGCGGTATCTGTCCAGACAGGGCGGGTTCAATCGGTCGTTGCAACACCGGGTTGTTG GAGTGAGTGTAGCTGTTGGGCAAAGACTTCGGCGGGAGTCTTCCAGCCGAGGACCTTTCGGGGTCGGTTGTTGAGCGTCA GTGCGACCGCTTCGAGGTCTTGA
Upstream 100 bases:
>100_bases CTTCGAGCACAACCCCTCGTGGCGTGAACCACCGCTCCATCGGTGTGACCGGACGGCAGTGTCCATGCCGCGAAACAATC GGGGACGCGGGAGTTTCGAT
Downstream 100 bases:
>100_bases GCCGACCATCGAGATAAGTCGGTGCCTTTCGGAAAGTACTGACGCAGAACGCCATTGGTGTTCTCGTTGGTAGGCCGCTG CCATGGCGAGTGCGGGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MENSADRSHDCEDRPDIGRFLARANPGESVATAQPCDIRLTRADVDAAIALGGRYLVSAQREDGSFVYEVDWMTGEESAD DNVVRQAGATWGVALLHRETREPDHRAAVDRSLRKWDTAVREIDGRRWLADGEFRSGKLGAVALIGLSLLERLAVPEGLD DPARMRASLDALCRFVEDARSPSGGFQKAFDTRTGNHSGAADPYSSGEALLLLARSGIELGEPDRLERALAWAEEDYHEF VVRPLADEPDPDVTKGYYQWGSMTWFAFATAGHAPETWGRRLIEQALWMVDVHRTLSRKRNTGYAYEGIVPAWEWARRTG NEDTARKLACVVHQGLRKLCAWQLGHPLASSALRSAPEQFHGAVQNHARQSALRIDVTQHQLHALMYARRFSVDAAEHLC ATDISAAPAVSVQTGRVQSVVATPGCWSECSCWAKTSAGVFQPRTFRGRLLSVSATASRS
Sequences:
>Translated_460_residues MENSADRSHDCEDRPDIGRFLARANPGESVATAQPCDIRLTRADVDAAIALGGRYLVSAQREDGSFVYEVDWMTGEESAD DNVVRQAGATWGVALLHRETREPDHRAAVDRSLRKWDTAVREIDGRRWLADGEFRSGKLGAVALIGLSLLERLAVPEGLD DPARMRASLDALCRFVEDARSPSGGFQKAFDTRTGNHSGAADPYSSGEALLLLARSGIELGEPDRLERALAWAEEDYHEF VVRPLADEPDPDVTKGYYQWGSMTWFAFATAGHAPETWGRRLIEQALWMVDVHRTLSRKRNTGYAYEGIVPAWEWARRTG NEDTARKLACVVHQGLRKLCAWQLGHPLASSALRSAPEQFHGAVQNHARQSALRIDVTQHQLHALMYARRFSVDAAEHLC ATDISAAPAVSVQTGRVQSVVATPGCWSECSCWAKTSAGVFQPRTFRGRLLSVSATASRS >Mature_460_residues MENSADRSHDCEDRPDIGRFLARANPGESVATAQPCDIRLTRADVDAAIALGGRYLVSAQREDGSFVYEVDWMTGEESAD DNVVRQAGATWGVALLHRETREPDHRAAVDRSLRKWDTAVREIDGRRWLADGEFRSGKLGAVALIGLSLLERLAVPEGLD DPARMRASLDALCRFVEDARSPSGGFQKAFDTRTGNHSGAADPYSSGEALLLLARSGIELGEPDRLERALAWAEEDYHEF VVRPLADEPDPDVTKGYYQWGSMTWFAFATAGHAPETWGRRLIEQALWMVDVHRTLSRKRNTGYAYEGIVPAWEWARRTG NEDTARKLACVVHQGLRKLCAWQLGHPLASSALRSAPEQFHGAVQNHARQSALRIDVTQHQLHALMYARRFSVDAAEHLC ATDISAAPAVSVQTGRVQSVVATPGCWSECSCWAKTSAGVFQPRTFRGRLLSVSATASRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50735; Mature: 50735
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENSADRSHDCEDRPDIGRFLARANPGESVATAQPCDIRLTRADVDAAIALGGRYLVSAQ CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCEEEEEEE REDGSFVYEVDWMTGEESADDNVVRQAGATWGVALLHRETREPDHRAAVDRSLRKWDTAV CCCCCEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH REIDGRRWLADGEFRSGKLGAVALIGLSLLERLAVPEGLDDPARMRASLDALCRFVEDAR HHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC SPSGGFQKAFDTRTGNHSGAADPYSSGEALLLLARSGIELGEPDRLERALAWAEEDYHEF CCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH VVRPLADEPDPDVTKGYYQWGSMTWFAFATAGHAPETWGRRLIEQALWMVDVHRTLSRKR HHHHCCCCCCCCHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC NTGYAYEGIVPAWEWARRTGNEDTARKLACVVHQGLRKLCAWQLGHPLASSALRSAPEQF CCCCEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHH HGAVQNHARQSALRIDVTQHQLHALMYARRFSVDAAEHLCATDISAAPAVSVQTGRVQSV HHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCEEEE VATPGCWSECSCWAKTSAGVFQPRTFRGRLLSVSATASRS EECCCCCHHCCHHHCCCCCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MENSADRSHDCEDRPDIGRFLARANPGESVATAQPCDIRLTRADVDAAIALGGRYLVSAQ CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCEEEEEEE REDGSFVYEVDWMTGEESADDNVVRQAGATWGVALLHRETREPDHRAAVDRSLRKWDTAV CCCCCEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH REIDGRRWLADGEFRSGKLGAVALIGLSLLERLAVPEGLDDPARMRASLDALCRFVEDAR HHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC SPSGGFQKAFDTRTGNHSGAADPYSSGEALLLLARSGIELGEPDRLERALAWAEEDYHEF CCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH VVRPLADEPDPDVTKGYYQWGSMTWFAFATAGHAPETWGRRLIEQALWMVDVHRTLSRKR HHHHCCCCCCCCHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC NTGYAYEGIVPAWEWARRTGNEDTARKLACVVHQGLRKLCAWQLGHPLASSALRSAPEQF CCCCEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHH HGAVQNHARQSALRIDVTQHQLHALMYARRFSVDAAEHLCATDISAAPAVSVQTGRVQSV HHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCEEEE VATPGCWSECSCWAKTSAGVFQPRTFRGRLLSVSATASRS EECCCCCHHCCHHHCCCCCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA