| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801610
Identifier: 108801610
GI number: 108801610
Start: 4922611
End: 4923738
Strand: Reverse
Name: 108801610
Synonym: Mmcs_4647
Alternate gene names: NA
Gene position: 4923738-4922611 (Counterclockwise)
Preceding gene: 108801612
Following gene: 108801609
Centisome position: 86.3
GC content: 66.49
Gene sequence:
>1128_bases GTGTACACGCAGCCCCTGGCCGACGCCATCGCCGAAGCGGAGAAGCTCGTCGCCGCCGCCCCGTTCATCGACTCCGAGGC CGACCTGCTCGAGGGACTGCAGTACCTCGCGGGCTGTATCGCCGCGTGCACGCACGTGGCGTTCGACTACGACCGCGATC ATCCGTTCCTGCACAGCGGCACCGGCCCGTTCACGAAGATGGGGCTCGACAACCCCGACACCCTGTACTTCGGCACCCGC GTGCAGCCGGGGTACGACTACGTGGTGACCGGCAGGCGGGGCACCACCACCGACGTGAGCTTCCAACTCCTCGGCGGCGA GTACACCGACGAGGTGGTGCCCGACAGTGCGACGGCGTTCGACGACCGCAGGCTCGACATCGCCGCCGACGGCTCTTTCG AATGGCGGTTCACCCCGGAAGTGCCGTCGCAGTTGGTCATTCGCGAGGTCTACAACGATTGGTCCGCTCAGCGCGGCACG TTCGCGATCGCCCGCACCGACACCGCGGGCACCGCGCCGCCGCCGCTGACCCGCGAGCTCATCGAGAAGCGTTACGCCGT GGCAGGCAAGCAACTCGTGCAGCGCGTCAAGACGTGGCTGCAGTTCCCGCAGTGGTTCTACAACGACAGCCCACCGAACA CGATGGTGGCGCCTCGGCTCACCCCCGGCGGCCTCGCGACGCAGTACTCGTCGGCGGGGCAGTTCGACCTCGCCGAGGAC CAGGCGCTGATCATCACGCTGCCGGTCACCGATGCGCCCTACCTCGGCTTCCAGCTCGGCAGCCTGTGGTACATCTCGCT GGACTACATCAACCACCAGACGTCGCTGAACGGCACTCAGGCGCAGGCCGATCCGGACGGCAAGATCCGCATCGTCGTCT CCGAACAGAATCCCGGCGTGACCAACTGGTGCGAAACACTCGGACACCGCAAGGGTTTTCTCCAGTTCCGCTGGCAGCGG GTGTCGCGTGAACTGACCCCGGCCGACGGGCCGTCCGTCGAGGTGGTGGACATCGGCGACGTGAGTGCGGCGCTGCCGTA CTACGCATCGAACAAGATTTCAGGAGAAGACTGGCGGGCACGGATCGCGCTACGCCAGAAACAGATCGGCGAGAGAATGG TGGGTTGA
Upstream 100 bases:
>100_bases TTGGTCGGTGCCATGGGGAGCACGGTACCTCGACGGTCCATATATGTAACGCTGCGGTCGATATATTGACTATGGATAGA ACACGTTCTAATTTCGGGCT
Downstream 100 bases:
>100_bases GATGGCGCTCGGGTTACTGAAGGACAAGGTCGTCGTCGTCAGCGGCGTCGGCCCGGCGCTCGGCACCACACTGGCCCGGC GCTGCGCGGAGGAGGGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MYTQPLADAIAEAEKLVAAAPFIDSEADLLEGLQYLAGCIAACTHVAFDYDRDHPFLHSGTGPFTKMGLDNPDTLYFGTR VQPGYDYVVTGRRGTTTDVSFQLLGGEYTDEVVPDSATAFDDRRLDIAADGSFEWRFTPEVPSQLVIREVYNDWSAQRGT FAIARTDTAGTAPPPLTRELIEKRYAVAGKQLVQRVKTWLQFPQWFYNDSPPNTMVAPRLTPGGLATQYSSAGQFDLAED QALIITLPVTDAPYLGFQLGSLWYISLDYINHQTSLNGTQAQADPDGKIRIVVSEQNPGVTNWCETLGHRKGFLQFRWQR VSRELTPADGPSVEVVDIGDVSAALPYYASNKISGEDWRARIALRQKQIGERMVG
Sequences:
>Translated_375_residues MYTQPLADAIAEAEKLVAAAPFIDSEADLLEGLQYLAGCIAACTHVAFDYDRDHPFLHSGTGPFTKMGLDNPDTLYFGTR VQPGYDYVVTGRRGTTTDVSFQLLGGEYTDEVVPDSATAFDDRRLDIAADGSFEWRFTPEVPSQLVIREVYNDWSAQRGT FAIARTDTAGTAPPPLTRELIEKRYAVAGKQLVQRVKTWLQFPQWFYNDSPPNTMVAPRLTPGGLATQYSSAGQFDLAED QALIITLPVTDAPYLGFQLGSLWYISLDYINHQTSLNGTQAQADPDGKIRIVVSEQNPGVTNWCETLGHRKGFLQFRWQR VSRELTPADGPSVEVVDIGDVSAALPYYASNKISGEDWRARIALRQKQIGERMVG >Mature_375_residues MYTQPLADAIAEAEKLVAAAPFIDSEADLLEGLQYLAGCIAACTHVAFDYDRDHPFLHSGTGPFTKMGLDNPDTLYFGTR VQPGYDYVVTGRRGTTTDVSFQLLGGEYTDEVVPDSATAFDDRRLDIAADGSFEWRFTPEVPSQLVIREVYNDWSAQRGT FAIARTDTAGTAPPPLTRELIEKRYAVAGKQLVQRVKTWLQFPQWFYNDSPPNTMVAPRLTPGGLATQYSSAGQFDLAED QALIITLPVTDAPYLGFQLGSLWYISLDYINHQTSLNGTQAQADPDGKIRIVVSEQNPGVTNWCETLGHRKGFLQFRWQR VSRELTPADGPSVEVVDIGDVSAALPYYASNKISGEDWRARIALRQKQIGERMVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41529; Mature: 41529
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTQPLADAIAEAEKLVAAAPFIDSEADLLEGLQYLAGCIAACTHVAFDYDRDHPFLHSG CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC TGPFTKMGLDNPDTLYFGTRVQPGYDYVVTGRRGTTTDVSFQLLGGEYTDEVVPDSATAF CCCCEECCCCCCCEEEEECCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCC DDRRLDIAADGSFEWRFTPEVPSQLVIREVYNDWSAQRGTFAIARTDTAGTAPPPLTREL CCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHH IEKRYAVAGKQLVQRVKTWLQFPQWFYNDSPPNTMVAPRLTPGGLATQYSSAGQFDLAED HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEECCCCCCCCCHHCCCCCCCCEECCC QALIITLPVTDAPYLGFQLGSLWYISLDYINHQTSLNGTQAQADPDGKIRIVVSEQNPGV CEEEEEEECCCCCCCCEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCH TNWCETLGHRKGFLQFRWQRVSRELTPADGPSVEVVDIGDVSAALPYYASNKISGEDWRA HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHCCHHCCCCCCCHHHHH RIALRQKQIGERMVG HHHHHHHHHHHHCCC >Mature Secondary Structure MYTQPLADAIAEAEKLVAAAPFIDSEADLLEGLQYLAGCIAACTHVAFDYDRDHPFLHSG CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC TGPFTKMGLDNPDTLYFGTRVQPGYDYVVTGRRGTTTDVSFQLLGGEYTDEVVPDSATAF CCCCEECCCCCCCEEEEECCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCC DDRRLDIAADGSFEWRFTPEVPSQLVIREVYNDWSAQRGTFAIARTDTAGTAPPPLTREL CCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHH IEKRYAVAGKQLVQRVKTWLQFPQWFYNDSPPNTMVAPRLTPGGLATQYSSAGQFDLAED HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEECCCCCCCCCHHCCCCCCCCEECCC QALIITLPVTDAPYLGFQLGSLWYISLDYINHQTSLNGTQAQADPDGKIRIVVSEQNPGV CEEEEEEECCCCCCCCEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCH TNWCETLGHRKGFLQFRWQRVSRELTPADGPSVEVVDIGDVSAALPYYASNKISGEDWRA HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHCCHHCCCCCCCHHHHH RIALRQKQIGERMVG HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA