| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801578
Identifier: 108801578
GI number: 108801578
Start: 4888144
End: 4889202
Strand: Reverse
Name: 108801578
Synonym: Mmcs_4615
Alternate gene names: NA
Gene position: 4889202-4888144 (Counterclockwise)
Preceding gene: 108801579
Following gene: 108801577
Centisome position: 85.69
GC content: 66.38
Gene sequence:
>1059_bases ATGGCTAGACCCGACAGCGCCAATCCGCTCCGGACCGGCATCTTCGGCATCGTCCTGGTGACCTGCCTGGTGTTGGTGTC ATTCGGCTACACCGGTCTGCCGTTCTTCCCTCAGGGCAAGTCCTACGAGGCCTACTTCACCGACGCCGGCGGCATCATCC CGGGCAACGACGTGAACGTCTCGGGCATCACGGTCGGCAAGGTCGACGGCGTAGAACTCGCCGGCGACGTCGCCAAGGTG AACTTCACCGTCGACCGCAAGGTCCGCGTCGGAGACCAATCGATGGTCGCGATCAAGACCGACACGGTGCTCGGCGAGAA GTCCCTGGCCGTCACCCCGCAGGGCGCCGGGTCCTCGACGGTGATTCCGCTGGGGCGCACCACCACCCCGTACACGCTGA ACACCGCGCTGCAGGATCTCGGCAACAACGTGGGCGAGTTGGACAAGCCGCGCTTCGAGCAGGCGCTGGCCACACTGACC GACTCGCTGCGCGAGGCCACCCCGCAACTGCGGGGCGCGCTGGACGGCATCACGAACCTGTCGCGCAGCATCAACGCCCG CGACGAGGCGCTCGAACAGCTCCTCGGCCATGCGAAGCGGGTCTCAGACACGCTGGCGCAGCGCGCCGGTCAGGTCAACC AGCTGATCGTCGACGGCAACCTGCTGTTCGCCGCGCTCGACGAGCGGCGCCAAGCGCTGAGCAATCTGATCGCCGGGATC GACGATGTCGCCGAACAGCTCTCGGGCTTCGTCAACGACAACCGCCGCGAATTTGGGCCCGCGCTCGAGAAACTCAACCT GGTGATGGACAACCTGCTGGAGCGCCGTGAGCACATCAAGGAGGCGCTGCGCAGGCTGCCGCCGTACGCCACCACACTCG GCGAGGTCGTCGGTTCGGGCCCCGGTTTCCAGGTCAACCTGTACGGTCTGCCACCCGCGCCGCTGGCCGAGGTGCTGCTG GACACCTACTTCCAGCCCGGCAAACTGCCGGACAGCCTCTCCGACTACCTGCGCGGCTATATCTCCGAGCGCATGATCAT CAGGCCGAAGTCGCCATGA
Upstream 100 bases:
>100_bases TACTGCTCGGTCCGGATCAAGGTCAACGGTCCGGCCGGCAGCGACATCCTGATCCCGTTCGGTGGACCGCCGGATCCGTC CAAGGGGAGGTGCTCCGAGA
Downstream 100 bases:
>100_bases CAAAAGGGGAGTCAGTGAAGTCGCACGGCCGTTGGATGCGGGTGGGCCTGGCGGCGCTGCTCGTGGTGACGCTGGCCGTC GGCATCTACCTGGTGTGGCC
Product: virulence factor MCE-like protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family C; MCE Family Protein; Mammalian Cell Entry Related Domain Protein; MCE-Family Protein; MCE-Family B; Mce Family C; MCE-Family D; Mce-Related Protein; Mce-Family C; Mce Family D; Mce Related Protein; Mce Family Protein Mce5B; Mce Family B; Virulence Factor MCE-Like Protein; Mce Family Protein Mce5C; ABC-Type Transport System
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MARPDSANPLRTGIFGIVLVTCLVLVSFGYTGLPFFPQGKSYEAYFTDAGGIIPGNDVNVSGITVGKVDGVELAGDVAKV NFTVDRKVRVGDQSMVAIKTDTVLGEKSLAVTPQGAGSSTVIPLGRTTTPYTLNTALQDLGNNVGELDKPRFEQALATLT DSLREATPQLRGALDGITNLSRSINARDEALEQLLGHAKRVSDTLAQRAGQVNQLIVDGNLLFAALDERRQALSNLIAGI DDVAEQLSGFVNDNRREFGPALEKLNLVMDNLLERREHIKEALRRLPPYATTLGEVVGSGPGFQVNLYGLPPAPLAEVLL DTYFQPGKLPDSLSDYLRGYISERMIIRPKSP
Sequences:
>Translated_352_residues MARPDSANPLRTGIFGIVLVTCLVLVSFGYTGLPFFPQGKSYEAYFTDAGGIIPGNDVNVSGITVGKVDGVELAGDVAKV NFTVDRKVRVGDQSMVAIKTDTVLGEKSLAVTPQGAGSSTVIPLGRTTTPYTLNTALQDLGNNVGELDKPRFEQALATLT DSLREATPQLRGALDGITNLSRSINARDEALEQLLGHAKRVSDTLAQRAGQVNQLIVDGNLLFAALDERRQALSNLIAGI DDVAEQLSGFVNDNRREFGPALEKLNLVMDNLLERREHIKEALRRLPPYATTLGEVVGSGPGFQVNLYGLPPAPLAEVLL DTYFQPGKLPDSLSDYLRGYISERMIIRPKSP >Mature_351_residues ARPDSANPLRTGIFGIVLVTCLVLVSFGYTGLPFFPQGKSYEAYFTDAGGIIPGNDVNVSGITVGKVDGVELAGDVAKVN FTVDRKVRVGDQSMVAIKTDTVLGEKSLAVTPQGAGSSTVIPLGRTTTPYTLNTALQDLGNNVGELDKPRFEQALATLTD SLREATPQLRGALDGITNLSRSINARDEALEQLLGHAKRVSDTLAQRAGQVNQLIVDGNLLFAALDERRQALSNLIAGID DVAEQLSGFVNDNRREFGPALEKLNLVMDNLLERREHIKEALRRLPPYATTLGEVVGSGPGFQVNLYGLPPAPLAEVLLD TYFQPGKLPDSLSDYLRGYISERMIIRPKSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37902; Mature: 37770
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPDSANPLRTGIFGIVLVTCLVLVSFGYTGLPFFPQGKSYEAYFTDAGGIIPGNDVNV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC SGITVGKVDGVELAGDVAKVNFTVDRKVRVGDQSMVAIKTDTVLGEKSLAVTPQGAGSST CEEEEECCCCCEECCCEEEEEEEEECEEEECCCEEEEEEECCEECCCCEEECCCCCCCCE VIPLGRTTTPYTLNTALQDLGNNVGELDKPRFEQALATLTDSLREATPQLRGALDGITNL EEECCCCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRSINARDEALEQLLGHAKRVSDTLAQRAGQVNQLIVDGNLLFAALDERRQALSNLIAGI HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH DDVAEQLSGFVNDNRREFGPALEKLNLVMDNLLERREHIKEALRRLPPYATTLGEVVGSG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC PGFQVNLYGLPPAPLAEVLLDTYFQPGKLPDSLSDYLRGYISERMIIRPKSP CCEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCCC >Mature Secondary Structure ARPDSANPLRTGIFGIVLVTCLVLVSFGYTGLPFFPQGKSYEAYFTDAGGIIPGNDVNV CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC SGITVGKVDGVELAGDVAKVNFTVDRKVRVGDQSMVAIKTDTVLGEKSLAVTPQGAGSST CEEEEECCCCCEECCCEEEEEEEEECEEEECCCEEEEEEECCEECCCCEEECCCCCCCCE VIPLGRTTTPYTLNTALQDLGNNVGELDKPRFEQALATLTDSLREATPQLRGALDGITNL EEECCCCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRSINARDEALEQLLGHAKRVSDTLAQRAGQVNQLIVDGNLLFAALDERRQALSNLIAGI HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH DDVAEQLSGFVNDNRREFGPALEKLNLVMDNLLERREHIKEALRRLPPYATTLGEVVGSG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC PGFQVNLYGLPPAPLAEVLLDTYFQPGKLPDSLSDYLRGYISERMIIRPKSP CCEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA