| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is menB [C]
Identifier: 108801570
GI number: 108801570
Start: 4880065
End: 4880961
Strand: Reverse
Name: menB [C]
Synonym: Mmcs_4607
Alternate gene names: 108801570
Gene position: 4880961-4880065 (Counterclockwise)
Preceding gene: 108801573
Following gene: 108801569
Centisome position: 85.55
GC content: 68.34
Gene sequence:
>897_bases GTGGCAGACGCCGAGCAGGTGACCTACGAGACCCTCGACGACGGGCGCATCGCGCGGATCTGGCTGAACCGGCCGCATAC GCAGAACGCCCAGTCCCGGACGCTGCTGGTGCAGCTGGACGAGGCGTTCGGGCGCGCGGAGGCCGACGATCAGGTGCGGG TGGTGATCCTGGCCGCGCGCGGCAAGAACTTCTCCGCCGGCCACGACCTCGGATCCGAGGAGGCCATCGCCGAACGCGGC CCCGGTCCCGCGCAGCATCCGACGTTCCGGATCAACGGTGCGACCAGGCCCGCCATCGCGGAGAAGATCTACCTGCAGGA GTGGCACTACTTCTTCGAGAACACCCGGCGGTGGCGCGATCTGCGCAAGATCACGATCGCCCAGGTGCAGGGAAATGCGA TCTCGGCGGGGCTGATGCTGATCTGGGCGTGCGACCTCATCGTCGCCTCCGACGACGCGAAGTTCAGCGACGTGGTGGCG GTCCGGCTGGGTATGCCGGGTGTCGAGTACTACGCCCACCCGTGGGAGTTCGGTCCGCGCAAGGCCAAAGAGCTGCTGCT GACCGGTGATTCGATCGACGCCGACGAGGCGCATCGCCTGGGTATGGTGTCGAAGATCTTCCCGCGCGCCGAACTCGAGG ACAAGACGGTCGAATTCGCGCGCCGGATCGCCGCACTGCCGACGATGGCAGCACTGCTGGTCAAGGATTCGGTCAACGCC GCCGCCGACGCGATGGGATTCACCGAGGCACTGCGGCACGGCTTCCACATCCACGAGCTCGGGCATGCGCACTGGGCGGC GCACAACGAGAACCGCGTGGCCGTCGGCATGCCGCCGGACGTGCCGGACTGGCGCGAGCTGGGCGCACCGAAGTTGGCCC GGCGCGACGAGCCGTGA
Upstream 100 bases:
>100_bases CTCGACGTCGCCGATATCGGCTGGATCAGACTTTGCAGGCATGTTCCAACTCTAGGCGACCGGCGCGCGGGCCTGCGACA CGCCCGCGTAGGGTGCTGCT
Downstream 100 bases:
>100_bases CGTATAACTAGAACGCGTTTCAGTTATACGGCCTACCTACCGGAGGATTCCCTTGCTGCTTTCCCAGCTCTCACTGGCGG ATCGCACCTATCTGGTCACC
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MADAEQVTYETLDDGRIARIWLNRPHTQNAQSRTLLVQLDEAFGRAEADDQVRVVILAARGKNFSAGHDLGSEEAIAERG PGPAQHPTFRINGATRPAIAEKIYLQEWHYFFENTRRWRDLRKITIAQVQGNAISAGLMLIWACDLIVASDDAKFSDVVA VRLGMPGVEYYAHPWEFGPRKAKELLLTGDSIDADEAHRLGMVSKIFPRAELEDKTVEFARRIAALPTMAALLVKDSVNA AADAMGFTEALRHGFHIHELGHAHWAAHNENRVAVGMPPDVPDWRELGAPKLARRDEP
Sequences:
>Translated_298_residues MADAEQVTYETLDDGRIARIWLNRPHTQNAQSRTLLVQLDEAFGRAEADDQVRVVILAARGKNFSAGHDLGSEEAIAERG PGPAQHPTFRINGATRPAIAEKIYLQEWHYFFENTRRWRDLRKITIAQVQGNAISAGLMLIWACDLIVASDDAKFSDVVA VRLGMPGVEYYAHPWEFGPRKAKELLLTGDSIDADEAHRLGMVSKIFPRAELEDKTVEFARRIAALPTMAALLVKDSVNA AADAMGFTEALRHGFHIHELGHAHWAAHNENRVAVGMPPDVPDWRELGAPKLARRDEP >Mature_297_residues ADAEQVTYETLDDGRIARIWLNRPHTQNAQSRTLLVQLDEAFGRAEADDQVRVVILAARGKNFSAGHDLGSEEAIAERGP GPAQHPTFRINGATRPAIAEKIYLQEWHYFFENTRRWRDLRKITIAQVQGNAISAGLMLIWACDLIVASDDAKFSDVVAV RLGMPGVEYYAHPWEFGPRKAKELLLTGDSIDADEAHRLGMVSKIFPRAELEDKTVEFARRIAALPTMAALLVKDSVNAA ADAMGFTEALRHGFHIHELGHAHWAAHNENRVAVGMPPDVPDWRELGAPKLARRDEP
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=239, Percent_Identity=28.4518828451883, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI31542718, Length=217, Percent_Identity=31.3364055299539, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI260274832, Length=243, Percent_Identity=27.9835390946502, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI45643119, Length=243, Percent_Identity=27.9835390946502, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI260275230, Length=243, Percent_Identity=27.9835390946502, Blast_Score=76, Evalue=3e-14, Organism=Escherichia coli, GI1788597, Length=276, Percent_Identity=27.8985507246377, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787659, Length=219, Percent_Identity=28.7671232876712, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787660, Length=227, Percent_Identity=27.7533039647577, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI221142681, Length=265, Percent_Identity=29.0566037735849, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI25145438, Length=264, Percent_Identity=28.030303030303, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17554946, Length=257, Percent_Identity=27.2373540856031, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17560910, Length=231, Percent_Identity=25.974025974026, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17535521, Length=214, Percent_Identity=26.1682242990654, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17540714, Length=229, Percent_Identity=30.1310043668122, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI20129971, Length=257, Percent_Identity=28.7937743190661, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24653477, Length=257, Percent_Identity=28.7937743190661, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24650670, Length=248, Percent_Identity=30.241935483871, Blast_Score=78, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 33194; Mature: 33063
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAEQVTYETLDDGRIARIWLNRPHTQNAQSRTLLVQLDEAFGRAEADDQVRVVILAAR CCCCHHCCCEECCCCCEEEEEECCCCCCCCCCCEEEEEEHHHCCCCCCCCCEEEEEEEEC GKNFSAGHDLGSEEAIAERGPGPAQHPTFRINGATRPAIAEKIYLQEWHYFFENTRRWRD CCCCCCCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH LRKITIAQVQGNAISAGLMLIWACDLIVASDDAKFSDVVAVRLGMPGVEYYAHPWEFGPR HHHEEEEEECCCCHHHHHHHHHHHHEEEECCCCCHHHEEEEEECCCCHHHCCCCCCCCCH KAKELLLTGDSIDADEAHRLGMVSKIFPRAELEDKTVEFARRIAALPTMAALLVKDSVNA HHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH AADAMGFTEALRHGFHIHELGHAHWAAHNENRVAVGMPPDVPDWRELGAPKLARRDEP HHHHHHHHHHHHCCCEEEHHCCHHHCCCCCCEEEEECCCCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure ADAEQVTYETLDDGRIARIWLNRPHTQNAQSRTLLVQLDEAFGRAEADDQVRVVILAAR CCCHHCCCEECCCCCEEEEEECCCCCCCCCCCEEEEEEHHHCCCCCCCCCEEEEEEEEC GKNFSAGHDLGSEEAIAERGPGPAQHPTFRINGATRPAIAEKIYLQEWHYFFENTRRWRD CCCCCCCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH LRKITIAQVQGNAISAGLMLIWACDLIVASDDAKFSDVVAVRLGMPGVEYYAHPWEFGPR HHHEEEEEECCCCHHHHHHHHHHHHEEEECCCCCHHHEEEEEECCCCHHHCCCCCCCCCH KAKELLLTGDSIDADEAHRLGMVSKIFPRAELEDKTVEFARRIAALPTMAALLVKDSVNA HHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH AADAMGFTEALRHGFHIHELGHAHWAAHNENRVAVGMPPDVPDWRELGAPKLARRDEP HHHHHHHHHHHHCCCEEEHHCCHHHCCCCCCEEEEECCCCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA