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The map label for this gene is yeaW [H]

Identifier: 108801369

GI number: 108801369

Start: 4685778

End: 4687193

Strand: Reverse

Name: yeaW [H]

Synonym: Mmcs_4406

Alternate gene names: 108801369

Gene position: 4687193-4685778 (Counterclockwise)

Preceding gene: 108801370

Following gene: 108801368

Centisome position: 82.15

GC content: 64.83

Gene sequence:

>1416_bases
GTGACCCATACCGAATCCGACCTCGACGCGGCGATCGAGGTCGAAGCCGATGCGGACGACTCGACGGGTGAGATCGCCGA
GGACCTGTCGGACGCGATGACCATCCCGGTCGAGGCGTACATCTCACCGGAGTACGCCCGCGCGGAGCGGGACAAGCTGT
GGCGCAGGGTCTGGCAGCAGGTCGGCCGCGTCGAGGAGATCCCCGAGGTGGGCAGCTACCTGACCTACGACATCCTCGAC
GACTCGATCATCGTGGTTCGCACCGGACCCAACGAGTTTCGGGCCCACCACAACGTCTGCATGCACCGCGGTCGCAAGCT
CGTCGACACCCCCGACGGTGCGAAGAACGCCGTCGGCCGCGCGCGGAAGTCGTTCGTCTGCGGATTTCACGGCTGGACAT
ACGGTTTGGACGGCACGTGCACCCACATCCGCGAACAGGACGACTGGAAGGGCGTGCTGACTCCGCGGAACACCCACCTG
GCCCCGGTTCAGGTGGACACCTGGGGCGGCTGGCTGTTCGTCAACATGGACCCGGACTGCGAGCCGTTGATGGACTACCT
CTTCCCGGCGTCGAAGATCCTCGATCCGTTCGGGCTGGAGAACATGCGCTACAAGTGGCGCAAGTGGTTGTACTTCGACT
GCAACTGGAAGGTCGCGATGGAGGCCTTCAACGAGACCTACCACGTGTTCACCACCCACCCGGAGTTCAACAAGTTCGGC
GAGTTCAAGGGCTGGGCCAAGGCGCAGGGCAAGCACAGCAACATCGGCTACGACGCGCCCAAGGGTATGGACGAGACCAA
GTCCAAGATCCGCCTCGGCACCGGCGACGACCCGCGCGTCTCGACCGCCGAGATGCAGATGTACACCTGGGAGCAGACCA
ACGCGACCACCACCGAGACACTGGTGAACGCGGCCAAGCGGCTGGTCGACGAACTGCCCGAGGGCACCCCCGCCGACAAG
GTGCTGCAGCACTGGTTGGCATCGGCGCGTCGTGACGACGAGGCCCGCGGCGTGATCTGGCCGACGATCCCGCCGGACAT
CCTCGGTCAGAGCGGCACCGCATGGCAGATCTTTCCGAACTTCCAGATCGGCCAGGGCTTGACGAGCGCCCTGTGCTACA
GCGCGCGGCCCGATCCGAGTTACGACCCGAACAAGTGCATCTTCGAGGTCGCGGTGTTCGAGCTGTACCCCAAAGGCGAA
GAGCCCGAGACGGAGTGGGCCTACACCCCGAAGGACTCGCCGAACTGGCTTTCGGTGCTGCCGCAGGACTTCTCCAACAT
GGCGGCCGTACAGCAGGGCATGAAGTCCGCCGGTTTCCCCGGCACGATGCCCAACCCCTACCGCGAACGCAGCACCGTCA
ACCTGCATCACCAACTGTCGAAGTACATGGGCACCGGCGAGCCCCGCGAACTGTGA

Upstream 100 bases:

>100_bases
TCTGGGCGCCGACAACACGTCGTTGTTCCTCAAGGACGAGAACTTCCGCAGCTCCATCAGCCGGTTCTGAGAGTCCGTTT
TGTTGTGAAAGGACGCACTA

Downstream 100 bases:

>100_bases
TTTCGGCGTGCTGAGTCGCGCTGGGCGCGACCAGCCACGCCGAAATCGCCTACGAAGGAGACACTGTGAACACTTGCGGT
CCCACCGAGACCCCTGACGA

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MTHTESDLDAAIEVEADADDSTGEIAEDLSDAMTIPVEAYISPEYARAERDKLWRRVWQQVGRVEEIPEVGSYLTYDILD
DSIIVVRTGPNEFRAHHNVCMHRGRKLVDTPDGAKNAVGRARKSFVCGFHGWTYGLDGTCTHIREQDDWKGVLTPRNTHL
APVQVDTWGGWLFVNMDPDCEPLMDYLFPASKILDPFGLENMRYKWRKWLYFDCNWKVAMEAFNETYHVFTTHPEFNKFG
EFKGWAKAQGKHSNIGYDAPKGMDETKSKIRLGTGDDPRVSTAEMQMYTWEQTNATTTETLVNAAKRLVDELPEGTPADK
VLQHWLASARRDDEARGVIWPTIPPDILGQSGTAWQIFPNFQIGQGLTSALCYSARPDPSYDPNKCIFEVAVFELYPKGE
EPETEWAYTPKDSPNWLSVLPQDFSNMAAVQQGMKSAGFPGTMPNPYRERSTVNLHHQLSKYMGTGEPREL

Sequences:

>Translated_471_residues
MTHTESDLDAAIEVEADADDSTGEIAEDLSDAMTIPVEAYISPEYARAERDKLWRRVWQQVGRVEEIPEVGSYLTYDILD
DSIIVVRTGPNEFRAHHNVCMHRGRKLVDTPDGAKNAVGRARKSFVCGFHGWTYGLDGTCTHIREQDDWKGVLTPRNTHL
APVQVDTWGGWLFVNMDPDCEPLMDYLFPASKILDPFGLENMRYKWRKWLYFDCNWKVAMEAFNETYHVFTTHPEFNKFG
EFKGWAKAQGKHSNIGYDAPKGMDETKSKIRLGTGDDPRVSTAEMQMYTWEQTNATTTETLVNAAKRLVDELPEGTPADK
VLQHWLASARRDDEARGVIWPTIPPDILGQSGTAWQIFPNFQIGQGLTSALCYSARPDPSYDPNKCIFEVAVFELYPKGE
EPETEWAYTPKDSPNWLSVLPQDFSNMAAVQQGMKSAGFPGTMPNPYRERSTVNLHHQLSKYMGTGEPREL
>Mature_470_residues
THTESDLDAAIEVEADADDSTGEIAEDLSDAMTIPVEAYISPEYARAERDKLWRRVWQQVGRVEEIPEVGSYLTYDILDD
SIIVVRTGPNEFRAHHNVCMHRGRKLVDTPDGAKNAVGRARKSFVCGFHGWTYGLDGTCTHIREQDDWKGVLTPRNTHLA
PVQVDTWGGWLFVNMDPDCEPLMDYLFPASKILDPFGLENMRYKWRKWLYFDCNWKVAMEAFNETYHVFTTHPEFNKFGE
FKGWAKAQGKHSNIGYDAPKGMDETKSKIRLGTGDDPRVSTAEMQMYTWEQTNATTTETLVNAAKRLVDELPEGTPADKV
LQHWLASARRDDEARGVIWPTIPPDILGQSGTAWQIFPNFQIGQGLTSALCYSARPDPSYDPNKCIFEVAVFELYPKGEE
PETEWAYTPKDSPNWLSVLPQDFSNMAAVQQGMKSAGFPGTMPNPYRERSTVNLHHQLSKYMGTGEPREL

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=209, Percent_Identity=28.2296650717703, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1788888, Length=202, Percent_Identity=26.7326732673267, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 53433; Mature: 53302

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHTESDLDAAIEVEADADDSTGEIAEDLSDAMTIPVEAYISPEYARAERDKLWRRVWQQ
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHEECCEEEEECCHHHHHHHHHHHHHHHHH
VGRVEEIPEVGSYLTYDILDDSIIVVRTGPNEFRAHHNVCMHRGRKLVDTPDGAKNAVGR
HCCHHHHHHHCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCEECCCCCCHHHHHHH
ARKSFVCGFHGWTYGLDGTCTHIREQDDWKGVLTPRNTHLAPVQVDTWGGWLFVNMDPDC
HHHHEEEEECCEECCCCCCCHHCCCCCCCCEEECCCCCEEEEEEEECCCCEEEEECCCCH
EPLMDYLFPASKILDPFGLENMRYKWRKWLYFDCNWKVAMEAFNETYHVFTTHPEFNKFG
HHHHHHHCCHHHHCCCCCCCHHHHEEEEEEEEECCHHHHHHHHCCEEEEEECCCCHHHCC
EFKGWAKAQGKHSNIGYDAPKGMDETKSKIRLGTGDDPRVSTAEMQMYTWEQTNATTTET
CCCCHHHCCCCCCCCCCCCCCCCCHHHHHEEECCCCCCCCCCEEEEEEEECCCCCHHHHH
LVNAAKRLVDELPEGTPADKVLQHWLASARRDDEARGVIWPTIPPDILGQSGTAWQIFPN
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCHHHCCCCCCEEEEECC
FQIGQGLTSALCYSARPDPSYDPNKCIFEVAVFELYPKGEEPETEWAYTPKDSPNWLSVL
CCHHCCHHHHHHHCCCCCCCCCCCHHHHEEEEEHCCCCCCCCCCCCEECCCCCCCHHHHC
PQDFSNMAAVQQGMKSAGFPGTMPNPYRERSTVNLHHQLSKYMGTGEPREL
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
THTESDLDAAIEVEADADDSTGEIAEDLSDAMTIPVEAYISPEYARAERDKLWRRVWQQ
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHEECCEEEEECCHHHHHHHHHHHHHHHHH
VGRVEEIPEVGSYLTYDILDDSIIVVRTGPNEFRAHHNVCMHRGRKLVDTPDGAKNAVGR
HCCHHHHHHHCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCEECCCCCCHHHHHHH
ARKSFVCGFHGWTYGLDGTCTHIREQDDWKGVLTPRNTHLAPVQVDTWGGWLFVNMDPDC
HHHHEEEEECCEECCCCCCCHHCCCCCCCCEEECCCCCEEEEEEEECCCCEEEEECCCCH
EPLMDYLFPASKILDPFGLENMRYKWRKWLYFDCNWKVAMEAFNETYHVFTTHPEFNKFG
HHHHHHHCCHHHHCCCCCCCHHHHEEEEEEEEECCHHHHHHHHCCEEEEEECCCCHHHCC
EFKGWAKAQGKHSNIGYDAPKGMDETKSKIRLGTGDDPRVSTAEMQMYTWEQTNATTTET
CCCCHHHCCCCCCCCCCCCCCCCCHHHHHEEECCCCCCCCCCEEEEEEEECCCCCHHHHH
LVNAAKRLVDELPEGTPADKVLQHWLASARRDDEARGVIWPTIPPDILGQSGTAWQIFPN
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCHHHCCCCCCEEEEECC
FQIGQGLTSALCYSARPDPSYDPNKCIFEVAVFELYPKGEEPETEWAYTPKDSPNWLSVL
CCHHCCHHHHHHHCCCCCCCCCCCHHHHEEEEEHCCCCCCCCCCCCEECCCCCCCHHHHC
PQDFSNMAAVQQGMKSAGFPGTMPNPYRERSTVNLHHQLSKYMGTGEPREL
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]