| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is yceL [C]
Identifier: 108801305
GI number: 108801305
Start: 4618109
End: 4619284
Strand: Reverse
Name: yceL [C]
Synonym: Mmcs_4341
Alternate gene names: 108801305
Gene position: 4619284-4618109 (Counterclockwise)
Preceding gene: 108801306
Following gene: 108801304
Centisome position: 80.96
GC content: 71.51
Gene sequence:
>1176_bases ATGACCCGGGTGCCCACTCGGCAGCCGTGGCTCACCCGGAATGTCCGACTGTTGTCGGCGGTGTCGTTCCTGCAGGACGC CGCCAGCGAGTTGCTCTACCCGCTGCTGCCGATCTACCTGACCTCGGTACTGGGTGCGCCGGCGGCGGTGGTCGGGGCGG TCGAGGGTGCCGCCGAGGGGGCGGCCTCGCTGACCAAGCTGGCCTCTGGACCGCTGGCGGACCGGTTCGCCAGACGGCCG CTGATCGCCACCGGCTACGGGATGGCGGCGCTGGGCAAGGTGATCGTGGCCGCCGCCGGGACCTGGCCTGGCGTGCTGGC CGGACGGGTCACCGACCGGCTCGGCAAGGGTCTGCGCGGCGCCCCGCGCGATGCGCTGCTGGTGGACGGTATCGACCCCG ACGCACGAGGCCGGGTCTTCGGATTCCACCGTGCCATGGACACTTTCGGCGCGGTGGTCGGGCCGCTGCTCGGGCTGGCC GGCTACGAACTGCTCGACCATCAGATCCCACCGCTGCTGTGGGTGGCGGTGATTCCCGCGGTGCTGTCCGTGGCGCTGGT GTTCTGCGTGCGCGAACGGACCAGGGCGGTGCCGGCGGTGGCGCGGCCGCCGCTGTTGTCGCGGGTCCGGGACCTCCCTC GGCGCTACTGGCGGGTGACCGCGCTGCTGGTCGGCTTCGGCGTGGTGAACTTCCCCGACGCGCTTCTCCTGTTGCGGCTC AATGAGATCGGTTTCTCCGTCGTCGAGGTGATCCTGGCCTACGTCGGCTACAACGTCGTGTACGCGGTCGCGAGTTACCC GGCCGGCGCGTTGGCCGACCGCGTCGGCACACCGGCCGTGTTCGCCGTCGGGTTGGGGTTCTTCGCCGTCGGTTACACCG GCCTGGGGCTGACCACCGACACGCTCACCGCATGGATGCTGATCGGGGTCTACGGGTTGTTCACCGCGTGCACCGACGGG GTCGGCAAGGCGTGGATCTCATCGCTGGTCGGCGCGGACGTGCAGGCCAGCGCCCAGGGCGTGTTCCAGGGCGCAAGTGG GTTCGCGATCCTGGCGGCCGGGCTGTGGGCGGGTCTGCTGTGGGGCGCCGACGGGACGGTGCCGCTGCTGATCTCCGGCC TGGCGGGCGGGGTGTTCGCCGTGATCGTCGCGGTGTTCGCCGTGCGGCACCGCTGA
Upstream 100 bases:
>100_bases TTGATCGTCGGCGTGGTGCGCGCTGCGCTCGCGCGCGGACAGGCCAAGGGATTCGCCGCGCTGGCGAACGAGAACCCGGA GTAGCCGCGGCTCAGGCATC
Downstream 100 bases:
>100_bases TTGGCGATCGTCCCGGCGGGTATGCCGCGACGATGACAGATCTGGTTGCGGATGCATTGGTGGCCCGGCTGCGCGACTGG GGCGCCGACCGGGTGTTCGG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MTRVPTRQPWLTRNVRLLSAVSFLQDAASELLYPLLPIYLTSVLGAPAAVVGAVEGAAEGAASLTKLASGPLADRFARRP LIATGYGMAALGKVIVAAAGTWPGVLAGRVTDRLGKGLRGAPRDALLVDGIDPDARGRVFGFHRAMDTFGAVVGPLLGLA GYELLDHQIPPLLWVAVIPAVLSVALVFCVRERTRAVPAVARPPLLSRVRDLPRRYWRVTALLVGFGVVNFPDALLLLRL NEIGFSVVEVILAYVGYNVVYAVASYPAGALADRVGTPAVFAVGLGFFAVGYTGLGLTTDTLTAWMLIGVYGLFTACTDG VGKAWISSLVGADVQASAQGVFQGASGFAILAAGLWAGLLWGADGTVPLLISGLAGGVFAVIVAVFAVRHR
Sequences:
>Translated_391_residues MTRVPTRQPWLTRNVRLLSAVSFLQDAASELLYPLLPIYLTSVLGAPAAVVGAVEGAAEGAASLTKLASGPLADRFARRP LIATGYGMAALGKVIVAAAGTWPGVLAGRVTDRLGKGLRGAPRDALLVDGIDPDARGRVFGFHRAMDTFGAVVGPLLGLA GYELLDHQIPPLLWVAVIPAVLSVALVFCVRERTRAVPAVARPPLLSRVRDLPRRYWRVTALLVGFGVVNFPDALLLLRL NEIGFSVVEVILAYVGYNVVYAVASYPAGALADRVGTPAVFAVGLGFFAVGYTGLGLTTDTLTAWMLIGVYGLFTACTDG VGKAWISSLVGADVQASAQGVFQGASGFAILAAGLWAGLLWGADGTVPLLISGLAGGVFAVIVAVFAVRHR >Mature_390_residues TRVPTRQPWLTRNVRLLSAVSFLQDAASELLYPLLPIYLTSVLGAPAAVVGAVEGAAEGAASLTKLASGPLADRFARRPL IATGYGMAALGKVIVAAAGTWPGVLAGRVTDRLGKGLRGAPRDALLVDGIDPDARGRVFGFHRAMDTFGAVVGPLLGLAG YELLDHQIPPLLWVAVIPAVLSVALVFCVRERTRAVPAVARPPLLSRVRDLPRRYWRVTALLVGFGVVNFPDALLLLRLN EIGFSVVEVILAYVGYNVVYAVASYPAGALADRVGTPAVFAVGLGFFAVGYTGLGLTTDTLTAWMLIGVYGLFTACTDGV GKAWISSLVGADVQASAQGVFQGASGFAILAAGLWAGLLWGADGTVPLLISGLAGGVFAVIVAVFAVRHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40710; Mature: 40579
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVPTRQPWLTRNVRLLSAVSFLQDAASELLYPLLPIYLTSVLGAPAAVVGAVEGAAEG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AASLTKLASGPLADRFARRPLIATGYGMAALGKVIVAAAGTWPGVLAGRVTDRLGKGLRG HHHHHHHHCCCHHHHHHCCCCEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC APRDALLVDGIDPDARGRVFGFHRAMDTFGAVVGPLLGLAGYELLDHQIPPLLWVAVIPA CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VLSVALVFCVRERTRAVPAVARPPLLSRVRDLPRRYWRVTALLVGFGVVNFPDALLLLRL HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHH NEIGFSVVEVILAYVGYNVVYAVASYPAGALADRVGTPAVFAVGLGFFAVGYTGLGLTTD HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHH TLTAWMLIGVYGLFTACTDGVGKAWISSLVGADVQASAQGVFQGASGFAILAAGLWAGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH WGADGTVPLLISGLAGGVFAVIVAVFAVRHR HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRVPTRQPWLTRNVRLLSAVSFLQDAASELLYPLLPIYLTSVLGAPAAVVGAVEGAAEG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AASLTKLASGPLADRFARRPLIATGYGMAALGKVIVAAAGTWPGVLAGRVTDRLGKGLRG HHHHHHHHCCCHHHHHHCCCCEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC APRDALLVDGIDPDARGRVFGFHRAMDTFGAVVGPLLGLAGYELLDHQIPPLLWVAVIPA CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VLSVALVFCVRERTRAVPAVARPPLLSRVRDLPRRYWRVTALLVGFGVVNFPDALLLLRL HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHH NEIGFSVVEVILAYVGYNVVYAVASYPAGALADRVGTPAVFAVGLGFFAVGYTGLGLTTD HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHH TLTAWMLIGVYGLFTACTDGVGKAWISSLVGADVQASAQGVFQGASGFAILAAGLWAGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH WGADGTVPLLISGLAGGVFAVIVAVFAVRHR HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]