Click here to switch to the map view.

The map label for this gene is 108801250

Identifier: 108801250

GI number: 108801250

Start: 4553276

End: 4554718

Strand: Reverse

Name: 108801250

Synonym: Mmcs_4286

Alternate gene names: NA

Gene position: 4554718-4553276 (Counterclockwise)

Preceding gene: 108801251

Following gene: 108801249

Centisome position: 79.83

GC content: 65.35

Gene sequence:

>1443_bases
TTGGCGCATTCTGCGCTCGGGCCGGCCTCGAGGCGTCAAACTGGGAACATGCCTCGTGATCGGGCCGACGATGCAACTCA
GGCGTTGGTGTTCTCACGCGCGATCGAGACGGTGATCTGGGCGATGCCCGCGGTGAACCTGCAACTCATGTACGAAGCGT
TCGCCCACTCGCTGGGGGGTCGCTACAACGAAGTCCTCTTCTGGTCGCGGCTACCGGACTGGCGCAACCAGACGCTGACG
CCGAACCCCGACACGATCTACTTCATGCCCTTCTTCGACACCCGAGACGGGCCGGTGGTCATCGAGATACCCCCGGCGCA
AGCCGGATCGATCACCGGCTCCTTGATGGATGCGTGGCAGTGCGCGCTCGAGGACGTCGGTCCTGCGGGTGCCGATCGAG
GAGCGGGTGGGCGCTATCTGATCACGCCGCCCGACTACACCGAACCGATTCCCGAGGGCTATATCGCGTTGCGCTGCGCC
ACGTTTCGTGGATACGGATTGTTCCGTTCGAACGTGGCCAGCAGCAGTGAAGCCGACATCGCGAAGGCGGTGGCGTATGG
CCGGGAGGTCAAGCTGTACTCCTTGGCGGACGCGGATCGGCCGGCACCCACTCGGTTCCGGGACGCTGCGGAAGCCGACT
TCGACAGCCTCATTCCCTACGACGCGCGGTTCTTCGAATTGTTGAACACCGTGGTCCAGAACGAGCCGTGGCTCGTCCGA
GACAAGGCGATGATCCACCAACTCGCCTCGCTCGGCATTCGCAAAGGTGAGCCGTTCACCCCCGACGAACCAACGCTCGG
ACTGTTGACAAGCGCGGCGATCGAGGCCCGCGACATACTCGACGCCCGGTACGCGTCGCTGTTCACTCCGCCCTATTTCC
CCGGCGCCGCGTGGGCCGTTCCCGCGCCGGCCGCGGTGATCAACGGCCAACAGACGTTCTACGAGGAAGCCGACTCCTAC
CCCGTCGACGATCGCGGCGTCATGTTCAGCTTCGGCTTCTTCAGTGCCAAGCACCTCGGCGGCGGACAGTTCTACTTGAT
GACGACCTCGGACAGCGCCGGCGAGAAGCTGGCTGGTGCGCGGTCATACCGCCTCCACGTGCCGCCCCACGTGCCGGTGA
CGCTGTACTGGTCGGCTACCGCCTACGATCGCAACACTCACGGGCTGATCCGCGGTATGACTCGCGCCAGCCGCGCCTCC
AACTCCCACGACATACGAGCGAACGAGGACGGCTCCGTCGACGTCTACTTCGCCCCTGACGCGCCCGAAGGCCAACAGGG
GAACTGGATTCCCACCGATCCGAAGGGCGACTTCGAAGTGCTCTTCCGCCTCTACGGCCCTACCGCACCCTTGTTCGACG
GGACGTGGCTTCTGCCCGACATCGAGCCCGCTGGGCCCGCGGCCCCGCGTCGTTCGAGCGACCCCAGCGTGGCCGACGCC
TGA

Upstream 100 bases:

>100_bases
GGCGCAGTTGGTAGCGCGACTCGTTCGCATCGAGTAGGTCAGGGGTTCGATTCCCCTTAGCTCCACAGAGTTCGTGCAGG
TCGGTCGAACGGGATTGTCG

Downstream 100 bases:

>100_bases
AAGGGGTGCCGGCGCCCCGGCGCATGAGTCGCTGGACGCGCAGCGCCTGCCACATCGAGTTCAACTCGATGCCGGGATCC
GACCCCGAAAGTTCACAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MAHSALGPASRRQTGNMPRDRADDATQALVFSRAIETVIWAMPAVNLQLMYEAFAHSLGGRYNEVLFWSRLPDWRNQTLT
PNPDTIYFMPFFDTRDGPVVIEIPPAQAGSITGSLMDAWQCALEDVGPAGADRGAGGRYLITPPDYTEPIPEGYIALRCA
TFRGYGLFRSNVASSSEADIAKAVAYGREVKLYSLADADRPAPTRFRDAAEADFDSLIPYDARFFELLNTVVQNEPWLVR
DKAMIHQLASLGIRKGEPFTPDEPTLGLLTSAAIEARDILDARYASLFTPPYFPGAAWAVPAPAAVINGQQTFYEEADSY
PVDDRGVMFSFGFFSAKHLGGGQFYLMTTSDSAGEKLAGARSYRLHVPPHVPVTLYWSATAYDRNTHGLIRGMTRASRAS
NSHDIRANEDGSVDVYFAPDAPEGQQGNWIPTDPKGDFEVLFRLYGPTAPLFDGTWLLPDIEPAGPAAPRRSSDPSVADA

Sequences:

>Translated_480_residues
MAHSALGPASRRQTGNMPRDRADDATQALVFSRAIETVIWAMPAVNLQLMYEAFAHSLGGRYNEVLFWSRLPDWRNQTLT
PNPDTIYFMPFFDTRDGPVVIEIPPAQAGSITGSLMDAWQCALEDVGPAGADRGAGGRYLITPPDYTEPIPEGYIALRCA
TFRGYGLFRSNVASSSEADIAKAVAYGREVKLYSLADADRPAPTRFRDAAEADFDSLIPYDARFFELLNTVVQNEPWLVR
DKAMIHQLASLGIRKGEPFTPDEPTLGLLTSAAIEARDILDARYASLFTPPYFPGAAWAVPAPAAVINGQQTFYEEADSY
PVDDRGVMFSFGFFSAKHLGGGQFYLMTTSDSAGEKLAGARSYRLHVPPHVPVTLYWSATAYDRNTHGLIRGMTRASRAS
NSHDIRANEDGSVDVYFAPDAPEGQQGNWIPTDPKGDFEVLFRLYGPTAPLFDGTWLLPDIEPAGPAAPRRSSDPSVADA
>Mature_479_residues
AHSALGPASRRQTGNMPRDRADDATQALVFSRAIETVIWAMPAVNLQLMYEAFAHSLGGRYNEVLFWSRLPDWRNQTLTP
NPDTIYFMPFFDTRDGPVVIEIPPAQAGSITGSLMDAWQCALEDVGPAGADRGAGGRYLITPPDYTEPIPEGYIALRCAT
FRGYGLFRSNVASSSEADIAKAVAYGREVKLYSLADADRPAPTRFRDAAEADFDSLIPYDARFFELLNTVVQNEPWLVRD
KAMIHQLASLGIRKGEPFTPDEPTLGLLTSAAIEARDILDARYASLFTPPYFPGAAWAVPAPAAVINGQQTFYEEADSYP
VDDRGVMFSFGFFSAKHLGGGQFYLMTTSDSAGEKLAGARSYRLHVPPHVPVTLYWSATAYDRNTHGLIRGMTRASRASN
SHDIRANEDGSVDVYFAPDAPEGQQGNWIPTDPKGDFEVLFRLYGPTAPLFDGTWLLPDIEPAGPAAPRRSSDPSVADA

Specific function: Unknown

COG id: COG5361

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52547; Mature: 52416

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHSALGPASRRQTGNMPRDRADDATQALVFSRAIETVIWAMPAVNLQLMYEAFAHSLGG
CCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
RYNEVLFWSRLPDWRNQTLTPNPDTIYFMPFFDTRDGPVVIEIPPAQAGSITGSLMDAWQ
CEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHH
CALEDVGPAGADRGAGGRYLITPPDYTEPIPEGYIALRCATFRGYGLFRSNVASSSEADI
HHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCHHHHCCCCCCHHHH
AKAVAYGREVKLYSLADADRPAPTRFRDAAEADFDSLIPYDARFFELLNTVVQNEPWLVR
HHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCEEEE
DKAMIHQLASLGIRKGEPFTPDEPTLGLLTSAAIEARDILDARYASLFTPPYFPGAAWAV
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PAPAAVINGQQTFYEEADSYPVDDRGVMFSFGFFSAKHLGGGQFYLMTTSDSAGEKLAGA
CCCCEEECCHHHHHHHHCCCCCCCCCEEEEECCCCCEECCCCEEEEEECCCCCCHHHHCC
RSYRLHVPPHVPVTLYWSATAYDRNTHGLIRGMTRASRASNSHDIRANEDGSVDVYFAPD
CEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEECCCCCCEEEEECCC
APEGQQGNWIPTDPKGDFEVLFRLYGPTAPLFDGTWLLPDIEPAGPAAPRRSSDPSVADA
CCCCCCCCCCCCCCCCCHHHHEEHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AHSALGPASRRQTGNMPRDRADDATQALVFSRAIETVIWAMPAVNLQLMYEAFAHSLGG
CCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
RYNEVLFWSRLPDWRNQTLTPNPDTIYFMPFFDTRDGPVVIEIPPAQAGSITGSLMDAWQ
CEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHH
CALEDVGPAGADRGAGGRYLITPPDYTEPIPEGYIALRCATFRGYGLFRSNVASSSEADI
HHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCHHHHCCCCCCHHHH
AKAVAYGREVKLYSLADADRPAPTRFRDAAEADFDSLIPYDARFFELLNTVVQNEPWLVR
HHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCEEEE
DKAMIHQLASLGIRKGEPFTPDEPTLGLLTSAAIEARDILDARYASLFTPPYFPGAAWAV
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PAPAAVINGQQTFYEEADSYPVDDRGVMFSFGFFSAKHLGGGQFYLMTTSDSAGEKLAGA
CCCCEEECCHHHHHHHHCCCCCCCCCEEEEECCCCCEECCCCEEEEEECCCCCCHHHHCC
RSYRLHVPPHVPVTLYWSATAYDRNTHGLIRGMTRASRASNSHDIRANEDGSVDVYFAPD
CEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEECCCCCCEEEEECCC
APEGQQGNWIPTDPKGDFEVLFRLYGPTAPLFDGTWLLPDIEPAGPAAPRRSSDPSVADA
CCCCCCCCCCCCCCCCCHHHHEEHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA