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The map label for this gene is 108801179

Identifier: 108801179

GI number: 108801179

Start: 4474273

End: 4474962

Strand: Reverse

Name: 108801179

Synonym: Mmcs_4215

Alternate gene names: NA

Gene position: 4474962-4474273 (Counterclockwise)

Preceding gene: 108801180

Following gene: 108801178

Centisome position: 78.43

GC content: 68.12

Gene sequence:

>690_bases
ATGCCGACAGTGACGTGGGCCCGACTCGATGGCGAGCGCCGGGCGGCGGTGGTGGCGGCCGCGGAGGCGGAGTTCGCCGC
GCACGGCTTCTCGCACGGCAGCCTCAACGTCATCGCGCGCCGCGCGGGCGTCGCCAAGGGCAGCCTCTTCCAGTACTTCG
CCGACAAACGCGACCTGTACGCGTTCATCACCGACGTGGCAAGTCAGCGGGTGCGGTCGTACATGGAGACGCAGATCCGC
GAACTCGACGCGAGCAGGCCGTTCTTCCCGTTCCTCGTCGACCTCCTCGACGCATGGGTCGCCTACTTCGCCGAACATCC
CAGAGAGCGATCACTGCACGCCGCTGCGAGTTTCGAGGTCGAGACCGACGCCCGGGTCAGTGTGCGTGCCGTCGTCCACC
GCCACTACCTGGAGGTGCTGCGTCCGCTGGTGCACGACGCGCGGGCTCGCGGGGATCTGCGCGATGACGCGGACACCGAG
ACCCTGGTCTCGCTACTGCTGATGATCCTGCCTCACCTCGCGCTGGCGCCCTATGTCCGCGGCCTCGATCCGATCCTCGG
ACTCGACGAACTGTCGCCCGAACAGCCGGCCCTGGCCGTGCGCCGATACGTCGCCGTGTTGTCGGCGGCCTTCCAAACCG
TCCCGGTGCAGCCCACACGGGATTCGATCGCGCAGGAGGTAACACCATGA

Upstream 100 bases:

>100_bases
AACGGGCTGACAGGGTCGCCCAAGCTCGTCGATTCACCCCATTGACTGTGGGCCGGATCACAGTATTGTGACCAGTGGTC
ATATGTGATGTGGAGGCTCG

Downstream 100 bases:

>100_bases
CCAGGACACGCTCGGACTCGCTCGCCGCCGGTGGGCTGAACTGGAACAGCATGCCGCTCAAGCTCTTCGCCGGTGGCAAC
GCGAAGTTCTGGGACCCCGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MPTVTWARLDGERRAAVVAAAEAEFAAHGFSHGSLNVIARRAGVAKGSLFQYFADKRDLYAFITDVASQRVRSYMETQIR
ELDASRPFFPFLVDLLDAWVAYFAEHPRERSLHAAASFEVETDARVSVRAVVHRHYLEVLRPLVHDARARGDLRDDADTE
TLVSLLLMILPHLALAPYVRGLDPILGLDELSPEQPALAVRRYVAVLSAAFQTVPVQPTRDSIAQEVTP

Sequences:

>Translated_229_residues
MPTVTWARLDGERRAAVVAAAEAEFAAHGFSHGSLNVIARRAGVAKGSLFQYFADKRDLYAFITDVASQRVRSYMETQIR
ELDASRPFFPFLVDLLDAWVAYFAEHPRERSLHAAASFEVETDARVSVRAVVHRHYLEVLRPLVHDARARGDLRDDADTE
TLVSLLLMILPHLALAPYVRGLDPILGLDELSPEQPALAVRRYVAVLSAAFQTVPVQPTRDSIAQEVTP
>Mature_228_residues
PTVTWARLDGERRAAVVAAAEAEFAAHGFSHGSLNVIARRAGVAKGSLFQYFADKRDLYAFITDVASQRVRSYMETQIRE
LDASRPFFPFLVDLLDAWVAYFAEHPRERSLHAAASFEVETDARVSVRAVVHRHYLEVLRPLVHDARARGDLRDDADTET
LVSLLLMILPHLALAPYVRGLDPILGLDELSPEQPALAVRRYVAVLSAAFQTVPVQPTRDSIAQEVTP

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25501; Mature: 25370

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVTWARLDGERRAAVVAAAEAEFAAHGFSHGSLNVIARRAGVAKGSLFQYFADKRDLY
CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
AFITDVASQRVRSYMETQIRELDASRPFFPFLVDLLDAWVAYFAEHPRERSLHAAASFEV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
ETDARVSVRAVVHRHYLEVLRPLVHDARARGDLRDDADTETLVSLLLMILPHLALAPYVR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLDPILGLDELSPEQPALAVRRYVAVLSAAFQTVPVQPTRDSIAQEVTP
CCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
PTVTWARLDGERRAAVVAAAEAEFAAHGFSHGSLNVIARRAGVAKGSLFQYFADKRDLY
CCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
AFITDVASQRVRSYMETQIRELDASRPFFPFLVDLLDAWVAYFAEHPRERSLHAAASFEV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
ETDARVSVRAVVHRHYLEVLRPLVHDARARGDLRDDADTETLVSLLLMILPHLALAPYVR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLDPILGLDELSPEQPALAVRRYVAVLSAAFQTVPVQPTRDSIAQEVTP
CCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA