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The map label for this gene is 108801135

Identifier: 108801135

GI number: 108801135

Start: 4434872

End: 4435777

Strand: Reverse

Name: 108801135

Synonym: Mmcs_4171

Alternate gene names: NA

Gene position: 4435777-4434872 (Counterclockwise)

Preceding gene: 108801137

Following gene: 108801132

Centisome position: 77.75

GC content: 73.84

Gene sequence:

>906_bases
ATGCGGGGCGGCCGGCTGCACTCACACCTGGCACACTGCCTGCCTGTGACGAAGCGAGCACTGGTGCTGGCCGGTGGGGG
TATCGCGGGCATCGCGTGGGAGACCGGGGTGCTGCGCGGCATCGCCGACGAAGCGCCCGACACCGCCGGCGCACTGCTGA
CCGCCGACGTCCTGGTGGGCACCTCGGCCGGGTCGACGGTGGCCGCGCAGATCGGCAGCGGTCTGGGCATCGACGCGCTC
TACGACCGGCAGCTGGCCGCGGCGTCGGCCGAGATCGACCCCGGGGTCAGCATCGACACGATCACCGGTGTCTTCCTCGC
CGCGCTGACCGATCCGGACGCGACGACCACCCAGAAGCTGCAACGCATCGGCGAGATCGCGCTGTCGACGCCGACCGTCG
CCGAGCACGTGCGCCGGGCGGTGATCGAACAGCGGCTGCCCAGCCACGACTGGCCCGACCGCGATCTGCGGGTGACGGCG
ATCGACACCGCCACGGGCGAACTGGTCACCTTCGACCGGACCGCGGGTGTGAGCCTGGTCGACGCCGTGGCCGCCAGTTG
CGCGGTCCCGGGGGTGTGGCCGCCGGTGACGATCGGCCCACGGCGCTTCATGGACGGCGGTGTGGGCAGCACCGTCAACC
TGGCCGTCGCCGCGGACTGTGAGGCCGCGGTGGTGCTGGTGCCCTCCGGCCGGTCCTCGCCGTCGCCGTTCGGCAGCGGG
GCGGTCGCCGAGGTGGACGGTTTCCCGGTTCCCACCTTGGGCGTCTTCGCCGACGACGAGGCGTTGGCCGCGTTCGGCGC
GAACCCGCTCGACCCGGCGTGCCGGATACCGTCCGCGCAGGCCGGCCGGGCGCAGGGCCGCCGGGTGGCCGCCGGCGTCA
CCGACTTCCTGGCGGGTCAGGTCTGA

Upstream 100 bases:

>100_bases
ACCTTGTCGATCCCGGTGACCTTCGACGCGCGGGCGGGGTTCGGACGGGGTCGGGCGACGTTGACACTGAGCACGCGGGA
CACCGCTACAGGTTAGGGCG

Downstream 100 bases:

>100_bases
AGCAGCGAGGCCGCCTGCGGCTGCTCGAACTGGTCGAGCGCCTCGACGGCCAACTGCCTGCCCAGCTCGATGACCTCGGC
TGCGCGGTGGAAATCCAAAC

Product: patatin

Products: NA

Alternate protein names: Phospholipase Patatin Family; Patatin-Like Phospholipase Family; Patatin-Like Phospholipase; Esterase Of Alpha-Beta Hydrolase Superfamily; Phospholipase Patatin Family Protein; Patatin Family FabD/Lysophospholipase-Like Protein

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRGGRLHSHLAHCLPVTKRALVLAGGGIAGIAWETGVLRGIADEAPDTAGALLTADVLVGTSAGSTVAAQIGSGLGIDAL
YDRQLAAASAEIDPGVSIDTITGVFLAALTDPDATTTQKLQRIGEIALSTPTVAEHVRRAVIEQRLPSHDWPDRDLRVTA
IDTATGELVTFDRTAGVSLVDAVAASCAVPGVWPPVTIGPRRFMDGGVGSTVNLAVAADCEAAVVLVPSGRSSPSPFGSG
AVAEVDGFPVPTLGVFADDEALAAFGANPLDPACRIPSAQAGRAQGRRVAAGVTDFLAGQV

Sequences:

>Translated_301_residues
MRGGRLHSHLAHCLPVTKRALVLAGGGIAGIAWETGVLRGIADEAPDTAGALLTADVLVGTSAGSTVAAQIGSGLGIDAL
YDRQLAAASAEIDPGVSIDTITGVFLAALTDPDATTTQKLQRIGEIALSTPTVAEHVRRAVIEQRLPSHDWPDRDLRVTA
IDTATGELVTFDRTAGVSLVDAVAASCAVPGVWPPVTIGPRRFMDGGVGSTVNLAVAADCEAAVVLVPSGRSSPSPFGSG
AVAEVDGFPVPTLGVFADDEALAAFGANPLDPACRIPSAQAGRAQGRRVAAGVTDFLAGQV
>Mature_301_residues
MRGGRLHSHLAHCLPVTKRALVLAGGGIAGIAWETGVLRGIADEAPDTAGALLTADVLVGTSAGSTVAAQIGSGLGIDAL
YDRQLAAASAEIDPGVSIDTITGVFLAALTDPDATTTQKLQRIGEIALSTPTVAEHVRRAVIEQRLPSHDWPDRDLRVTA
IDTATGELVTFDRTAGVSLVDAVAASCAVPGVWPPVTIGPRRFMDGGVGSTVNLAVAADCEAAVVLVPSGRSSPSPFGSG
AVAEVDGFPVPTLGVFADDEALAAFGANPLDPACRIPSAQAGRAQGRRVAAGVTDFLAGQV

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30422; Mature: 30422

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGGRLHSHLAHCLPVTKRALVLAGGGIAGIAWETGVLRGIADEAPDTAGALLTADVLVG
CCCCHHHHHHHHHHHHHCCEEEEECCCEEEEHHHHHHHHHHHHCCCCCCCHHEEEHEEEE
TSAGSTVAAQIGSGLGIDALYDRQLAAASAEIDPGVSIDTITGVFLAALTDPDATTTQKL
CCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEECCCCCHHHHHH
QRIGEIALSTPTVAEHVRRAVIEQRLPSHDWPDRDLRVTAIDTATGELVTFDRTAGVSLV
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCHHHH
DAVAASCAVPGVWPPVTIGPRRFMDGGVGSTVNLAVAADCEAAVVLVPSGRSSPSPFGSG
HHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCC
AVAEVDGFPVPTLGVFADDEALAAFGANPLDPACRIPSAQAGRAQGRRVAAGVTDFLAGQ
CEEECCCCCCCEEEEEECCHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEHHHHHHHCCC
V
C
>Mature Secondary Structure
MRGGRLHSHLAHCLPVTKRALVLAGGGIAGIAWETGVLRGIADEAPDTAGALLTADVLVG
CCCCHHHHHHHHHHHHHCCEEEEECCCEEEEHHHHHHHHHHHHCCCCCCCHHEEEHEEEE
TSAGSTVAAQIGSGLGIDALYDRQLAAASAEIDPGVSIDTITGVFLAALTDPDATTTQKL
CCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEECCCCCHHHHHH
QRIGEIALSTPTVAEHVRRAVIEQRLPSHDWPDRDLRVTAIDTATGELVTFDRTAGVSLV
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCHHHH
DAVAASCAVPGVWPPVTIGPRRFMDGGVGSTVNLAVAADCEAAVVLVPSGRSSPSPFGSG
HHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCC
AVAEVDGFPVPTLGVFADDEALAAFGANPLDPACRIPSAQAGRAQGRRVAAGVTDFLAGQ
CEEECCCCCCCEEEEEECCHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEHHHHHHHCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA