| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801126
Identifier: 108801126
GI number: 108801126
Start: 4427850
End: 4429139
Strand: Reverse
Name: 108801126
Synonym: Mmcs_4162
Alternate gene names: NA
Gene position: 4429139-4427850 (Counterclockwise)
Preceding gene: 108801127
Following gene: 108801125
Centisome position: 77.63
GC content: 67.52
Gene sequence:
>1290_bases GTGACCCCGCGACTCATCCTGGACTCCCCGGAGCCTGGAAGCGGTAAGACGAGGGTATTGGAGGTGCTGGCGCTGCTGAG CCACAACGCCAAGCTCACGTTGAGCACGACGACGGCGGCGCTATATCGCCGCATCGCCGCCGCCGGTGACCATCCGCCCA CCATCCTGCAGGATGAGGCGGACGCGGTGTTCGGCAAGACCGCCAACCCACAGGCCGAAGACCTGCGCGCGCTGTTCAAC GCGGGATACAAGCGCGGCGCCACGGTCGATCGGTGCGAGGGCGACGCGAAGAACATGAAGGTTCGCGAGTTTCCGGTGTT CGCCCCCGTGGCGCTGGCGGGGCTCGCCGGCAAGATGCCGGCCACCATTACCGACCGCGCAGTGACGCTGCATATGCGCA GACGGGCGCCCGACGAGCATGTCGCGGAGTTCCGGGAGCGCGACGCCGCTGCGAAGGCCGCGCCGCTGCGCGAGGCGCTG GAAGCGTGGTCCGCCGCCAACGCCGACCAGCTAGCTGCTGCTCGGCCTGCGATGCCCGATGGCGTGCACGACCGGCCCGC GGAGGTCTGGGAAGCGCTCATCGCTGTTGCCGACAACGCCGGGGGCGCGTGGCCCGAGCGGGCGCGGGCGGCCTGCCGGT ACTTCGTGCTCGAGGTCCGCGCCGATGAGCTGTCGCTCGGCCTGCGGCTGCTGCGCGATGCGCAGAACGCGTTCGGCGAT GACGACAGGATGCACTCAGCCGAGCTCGTCAGGCTGCTCACCATCGACCCTGAGTCGGAGTGGCGCGACCTCTGGGGCAA GCCGCTCGACCAGCGTCGTCTAGCAAAGGAGTTGAAGCGTTACGGTGTGGAGTCCCAGGAGGTTCGGATTGGCCCGGTCA CGCGAAAGGGCTACCTCGTCGCCGGGGACACCGGACTCGCACAAGCGTGGCACCGATACCTGCCTACCGCCTATATGGGC AACAAGCGCAACAGCCGCAACGTTGCAGTTCAGAGCGATTTGCGTCCGCAACATGAGCGCAACACTGAGCGCAACACGGA CGACGACCCGAACCGCGAGCGCAACGAGCGCAACACAAGCGCAACAGCGAAAACACCCTCTGATCAGGGACGATTCCCCG GCGTTGCGGCTGTTGCGCTTGTTGCGGACATAAATGGAAACGCGGGAAGCGGCAGCGGGTTCGTCCCACCGAGCGGTCCC GGTCGGTGCCCCGCCTGCGGCTGCCACGTCGCGACGCAGGGGCACAGCGATGACTGCCAGCAAACAGACAGGAGGGCCAG CGCATCATGA
Upstream 100 bases:
>100_bases CGAGCAGTTCGCGGGTCCGTTCCTGGCGTTCGGGAGCCCGCACCACCTGGTTGTGCTCGTGCTGTGGGCGGTGCACACGT GGGCTGTCAACGCGTTCTAC
Downstream 100 bases:
>100_bases CAACTCCCGACGACGGGGACGGCGACGACGGGGCATTCATCGAGTTGTTCGTCGGTTTCGGCCCGGTCCGAGACGGCCGC AATTATGCCTTGAAGTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MTPRLILDSPEPGSGKTRVLEVLALLSHNAKLTLSTTTAALYRRIAAAGDHPPTILQDEADAVFGKTANPQAEDLRALFN AGYKRGATVDRCEGDAKNMKVREFPVFAPVALAGLAGKMPATITDRAVTLHMRRRAPDEHVAEFRERDAAAKAAPLREAL EAWSAANADQLAAARPAMPDGVHDRPAEVWEALIAVADNAGGAWPERARAACRYFVLEVRADELSLGLRLLRDAQNAFGD DDRMHSAELVRLLTIDPESEWRDLWGKPLDQRRLAKELKRYGVESQEVRIGPVTRKGYLVAGDTGLAQAWHRYLPTAYMG NKRNSRNVAVQSDLRPQHERNTERNTDDDPNRERNERNTSATAKTPSDQGRFPGVAAVALVADINGNAGSGSGFVPPSGP GRCPACGCHVATQGHSDDCQQTDRRASAS
Sequences:
>Translated_429_residues MTPRLILDSPEPGSGKTRVLEVLALLSHNAKLTLSTTTAALYRRIAAAGDHPPTILQDEADAVFGKTANPQAEDLRALFN AGYKRGATVDRCEGDAKNMKVREFPVFAPVALAGLAGKMPATITDRAVTLHMRRRAPDEHVAEFRERDAAAKAAPLREAL EAWSAANADQLAAARPAMPDGVHDRPAEVWEALIAVADNAGGAWPERARAACRYFVLEVRADELSLGLRLLRDAQNAFGD DDRMHSAELVRLLTIDPESEWRDLWGKPLDQRRLAKELKRYGVESQEVRIGPVTRKGYLVAGDTGLAQAWHRYLPTAYMG NKRNSRNVAVQSDLRPQHERNTERNTDDDPNRERNERNTSATAKTPSDQGRFPGVAAVALVADINGNAGSGSGFVPPSGP GRCPACGCHVATQGHSDDCQQTDRRASAS >Mature_428_residues TPRLILDSPEPGSGKTRVLEVLALLSHNAKLTLSTTTAALYRRIAAAGDHPPTILQDEADAVFGKTANPQAEDLRALFNA GYKRGATVDRCEGDAKNMKVREFPVFAPVALAGLAGKMPATITDRAVTLHMRRRAPDEHVAEFRERDAAAKAAPLREALE AWSAANADQLAAARPAMPDGVHDRPAEVWEALIAVADNAGGAWPERARAACRYFVLEVRADELSLGLRLLRDAQNAFGDD DRMHSAELVRLLTIDPESEWRDLWGKPLDQRRLAKELKRYGVESQEVRIGPVTRKGYLVAGDTGLAQAWHRYLPTAYMGN KRNSRNVAVQSDLRPQHERNTERNTDDDPNRERNERNTSATAKTPSDQGRFPGVAAVALVADINGNAGSGSGFVPPSGPG RCPACGCHVATQGHSDDCQQTDRRASAS
Specific function: Probably does not play a direct role in plasmid integration or excision [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022081 [H]
Pfam domain/function: PF12307 DUF3631 [H]
EC number: NA
Molecular weight: Translated: 46626; Mature: 46494
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRLILDSPEPGSGKTRVLEVLALLSHNAKLTLSTTTAALYRRIAAAGDHPPTILQDEA CCCCEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCC DAVFGKTANPQAEDLRALFNAGYKRGATVDRCEGDAKNMKVREFPVFAPVALAGLAGKMP HHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCHHCCEEEECCCHHHHHHHHHCCCCC ATITDRAVTLHMRRRAPDEHVAEFRERDAAAKAAPLREALEAWSAANADQLAAARPAMPD CCCCCHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC GVHDRPAEVWEALIAVADNAGGAWPERARAACRYFVLEVRADELSLGLRLLRDAQNAFGD CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHCCC DDRMHSAELVRLLTIDPESEWRDLWGKPLDQRRLAKELKRYGVESQEVRIGPVTRKGYLV CHHHHHHHEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEE AGDTGLAQAWHRYLPTAYMGNKRNSRNVAVQSDLRPQHERNTERNTDDDPNRERNERNTS ECCCHHHHHHHHHCCHHHHCCCCCCCCEEEECCCCCHHHCCCCCCCCCCCCCHHHHCCCC ATAKTPSDQGRFPGVAAVALVADINGNAGSGSGFVPPSGPGRCPACGCHVATQGHSDDCQ CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHH QTDRRASAS HHHHHCCCC >Mature Secondary Structure TPRLILDSPEPGSGKTRVLEVLALLSHNAKLTLSTTTAALYRRIAAAGDHPPTILQDEA CCCEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCC DAVFGKTANPQAEDLRALFNAGYKRGATVDRCEGDAKNMKVREFPVFAPVALAGLAGKMP HHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCHHCCEEEECCCHHHHHHHHHCCCCC ATITDRAVTLHMRRRAPDEHVAEFRERDAAAKAAPLREALEAWSAANADQLAAARPAMPD CCCCCHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC GVHDRPAEVWEALIAVADNAGGAWPERARAACRYFVLEVRADELSLGLRLLRDAQNAFGD CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHCCC DDRMHSAELVRLLTIDPESEWRDLWGKPLDQRRLAKELKRYGVESQEVRIGPVTRKGYLV CHHHHHHHEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEE AGDTGLAQAWHRYLPTAYMGNKRNSRNVAVQSDLRPQHERNTERNTDDDPNRERNERNTS ECCCHHHHHHHHHCCHHHHCCCCCCCCEEEECCCCCHHHCCCCCCCCCCCCCHHHHCCCC ATAKTPSDQGRFPGVAAVALVADINGNAGSGSGFVPPSGPGRCPACGCHVATQGHSDDCQ CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHH QTDRRASAS HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2180909 [H]