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The map label for this gene is yyaL [H]

Identifier: 108801104

GI number: 108801104

Start: 4405927

End: 4407921

Strand: Reverse

Name: yyaL [H]

Synonym: Mmcs_4140

Alternate gene names: 108801104

Gene position: 4407921-4405927 (Counterclockwise)

Preceding gene: 108801105

Following gene: 108801103

Centisome position: 77.26

GC content: 72.48

Gene sequence:

>1995_bases
GTGAGTCCGGCGGGTAACGAACTCGGCGGGGCCACCAGCCCCTACCTGCGCCAGCACGCCGACAACCCGGTGCACTGGCG
TCAGTGGACCCCGGCCGCGCTGGCCGAGGCCGCCGAACGTGACGTGCCGATCCTGCTGTCCATCGGATACGCGGCCTGCC
ACTGGTGTCACGTCATGGCCCATGAATCGTTCGAGGACGACGAGGTCGCGGCCGCCGCCAACGCCGACTTCGTGTGCATC
AAGGTCGACCGCGAGGAGCGGCCGGACCTCGACGCGGTGTACATGAACGCCACCGTCGCGCTGACCGGTCAGGGCGGTTG
GCCGATGACGTGTTTCCTCACCCCCGACGGGCGGCCGTTCTTCTGCGGCACGTACTACCCGAAACCGAACTTCCTGCAGT
TGCTGGCCGCCGTCGCCGAAACGTGGCGGGAACGTCGCGGTGAGGTGGAGGAGGCGTCCGACCGCATCGCCGGCGAACTG
CGCAACATGGCGGCCGGGCTGCCCGGGGGCGGACCGCAGGTGCGGCCGGAACTCTGCGACGCCGCGGTCGCCGCGGTGCT
GCGCGACGAGGACACCGCCCGCGGCGGTTTCGGGGATGCGCCGAAGTTCCCCCCGTCGGCACTGCTGGAGGCCCTGCTGC
GCCACCACGAGCGCACCGGGTCGCCGGAGTCGCTCGCCACCATGGAGCGCACCGCGACCGCGATGGCCCGCGGCGGAATC
TACGACCAGTTGGCGGGCGGCTTCGCGCGGTACAGCGTCGACGCCGAATGGGTGGTGCCGCACTTCGAGAAGATGCTCTA
CGACAATGCGCTGCTGCTGCGGGCGTATGCCCACTGGGCGCGCCGTACGGGTGATCCGCTGGCCCGCCGGGTGGCCGGTG
AGACGGCCCGGTTCCTCATCGACGACATGGGTGCGGACGCGATGTTCACCTCGTCGCTGGACGCCGACGCCGACGGCGTC
GAGGGCCTCACCTATGCGTGGACACCCGCGCAATTGCGCGACGTGCTCGGCGACGACGACGGACGCTGGGCCGCAACGGT
TTTCGGTGTCACCGACGCCGGGACGTTCGAACACGGCACCTCGGTGCTGCAACTACTTGCCGACGCGGACGACCCGGCGC
GCCTGGAACGGGTGCGCACCGCGCTGCGGGCCGCGCGGTCGACCCGTCCGCAGCCCGGCCGTGACGACAAGGTCGTCACC
GCGTGGAACGGGCTGGCGATCACCGCACTCGCCGAGGCCGCCGTCGCCCTCGGGGACCCCGAATTGCTCGACGCCGCAAC
GGGTTGCGCACGTGCCGTCGTCGATCTGCACGTGGTCGACGGCCGGTTGCGCCGCGCCAGCCTCGGCGGCCGGGTGGGGG
AGAGCGCGGCGATCCTCGAAGACCACGCCGCGCTGGCCACCGGATTGCTCACCGTCCACCAGGCGACCGGGGACGCGCGG
TGGCTCGAGACCGGTCTGCACCTCGTCGATGTCGCGCTGGACCACTTCGCCGACCCGCAGCGCGACGGGTACTGGTTCGA
CACCGCCGACGACGCCGAGGCGTTGGTGCTGCGGCCCTCGGATCCGTTCGACGGTGCGACACCGTCGGGTGCGTCGCTGA
TCGCCGAGGCGCTGCAACTGGCCGCGCACCTGGCGCCGTCGGCGCGGGCCGGGCGGTACGGCGCTGCCGCCGACGCCACG
CTGGCCACCGCGGCGCTCATCCTCGAACGGGCGCCGCGATCCGGCGGGCACTGGCTCGCGGTGGCCGAGGCCGCCGTCCG
CGGACCGATCCAGATCGCGGTGGCCTGTGACCCGGCCGCCTCCGAATTGCTGGCTGCCGCACGGGTACTCGCACCGGGTG
GGGCGATCGTGGTGGGCGGTCCGGTGGGCTCGTCGGAACTGCTGACCGACCGTGACCGTGTCCGCGGCGCCGACGCCGCG
TACGTCTGCCGGGGCCGGGTGTGCGACCTCCCGGTGACGACCCAAGACGAGTTGGCCGCCGCGCTCACCGTGTAA

Upstream 100 bases:

>100_bases
CATCCCGAACCCGATCAGGCCGTGGACGACGGCACCGTCGACCTCGGTGGCGATCCCGGCGCGGGCCCCCGCAGCGTTGC
CGAGAACGGGAACCCCCCGC

Downstream 100 bases:

>100_bases
CCTGCGGCACATGGCCGTCGACCCCAAAGCCCTGGTTCAGCGTTACCTCGACACCGTCGCCTCCGGCACCGCCGACGATG
TCGCCGCGCTGTACGCCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 664; Mature: 663

Protein sequence:

>664_residues
MSPAGNELGGATSPYLRQHADNPVHWRQWTPAALAEAAERDVPILLSIGYAACHWCHVMAHESFEDDEVAAAANADFVCI
KVDREERPDLDAVYMNATVALTGQGGWPMTCFLTPDGRPFFCGTYYPKPNFLQLLAAVAETWRERRGEVEEASDRIAGEL
RNMAAGLPGGGPQVRPELCDAAVAAVLRDEDTARGGFGDAPKFPPSALLEALLRHHERTGSPESLATMERTATAMARGGI
YDQLAGGFARYSVDAEWVVPHFEKMLYDNALLLRAYAHWARRTGDPLARRVAGETARFLIDDMGADAMFTSSLDADADGV
EGLTYAWTPAQLRDVLGDDDGRWAATVFGVTDAGTFEHGTSVLQLLADADDPARLERVRTALRAARSTRPQPGRDDKVVT
AWNGLAITALAEAAVALGDPELLDAATGCARAVVDLHVVDGRLRRASLGGRVGESAAILEDHAALATGLLTVHQATGDAR
WLETGLHLVDVALDHFADPQRDGYWFDTADDAEALVLRPSDPFDGATPSGASLIAEALQLAAHLAPSARAGRYGAAADAT
LATAALILERAPRSGGHWLAVAEAAVRGPIQIAVACDPAASELLAAARVLAPGGAIVVGGPVGSSELLTDRDRVRGADAA
YVCRGRVCDLPVTTQDELAAALTV

Sequences:

>Translated_664_residues
MSPAGNELGGATSPYLRQHADNPVHWRQWTPAALAEAAERDVPILLSIGYAACHWCHVMAHESFEDDEVAAAANADFVCI
KVDREERPDLDAVYMNATVALTGQGGWPMTCFLTPDGRPFFCGTYYPKPNFLQLLAAVAETWRERRGEVEEASDRIAGEL
RNMAAGLPGGGPQVRPELCDAAVAAVLRDEDTARGGFGDAPKFPPSALLEALLRHHERTGSPESLATMERTATAMARGGI
YDQLAGGFARYSVDAEWVVPHFEKMLYDNALLLRAYAHWARRTGDPLARRVAGETARFLIDDMGADAMFTSSLDADADGV
EGLTYAWTPAQLRDVLGDDDGRWAATVFGVTDAGTFEHGTSVLQLLADADDPARLERVRTALRAARSTRPQPGRDDKVVT
AWNGLAITALAEAAVALGDPELLDAATGCARAVVDLHVVDGRLRRASLGGRVGESAAILEDHAALATGLLTVHQATGDAR
WLETGLHLVDVALDHFADPQRDGYWFDTADDAEALVLRPSDPFDGATPSGASLIAEALQLAAHLAPSARAGRYGAAADAT
LATAALILERAPRSGGHWLAVAEAAVRGPIQIAVACDPAASELLAAARVLAPGGAIVVGGPVGSSELLTDRDRVRGADAA
YVCRGRVCDLPVTTQDELAAALTV
>Mature_663_residues
SPAGNELGGATSPYLRQHADNPVHWRQWTPAALAEAAERDVPILLSIGYAACHWCHVMAHESFEDDEVAAAANADFVCIK
VDREERPDLDAVYMNATVALTGQGGWPMTCFLTPDGRPFFCGTYYPKPNFLQLLAAVAETWRERRGEVEEASDRIAGELR
NMAAGLPGGGPQVRPELCDAAVAAVLRDEDTARGGFGDAPKFPPSALLEALLRHHERTGSPESLATMERTATAMARGGIY
DQLAGGFARYSVDAEWVVPHFEKMLYDNALLLRAYAHWARRTGDPLARRVAGETARFLIDDMGADAMFTSSLDADADGVE
GLTYAWTPAQLRDVLGDDDGRWAATVFGVTDAGTFEHGTSVLQLLADADDPARLERVRTALRAARSTRPQPGRDDKVVTA
WNGLAITALAEAAVALGDPELLDAATGCARAVVDLHVVDGRLRRASLGGRVGESAAILEDHAALATGLLTVHQATGDARW
LETGLHLVDVALDHFADPQRDGYWFDTADDAEALVLRPSDPFDGATPSGASLIAEALQLAAHLAPSARAGRYGAAADATL
ATAALILERAPRSGGHWLAVAEAAVRGPIQIAVACDPAASELLAAARVLAPGGAIVVGGPVGSSELLTDRDRVRGADAAY
VCRGRVCDLPVTTQDELAAALTV

Specific function: Unknown

COG id: COG1331

COG function: function code O; Highly conserved protein containing a thioredoxin domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To C.elegans B0495.5 [H]

Homologues:

Organism=Homo sapiens, GI31542723, Length=733, Percent_Identity=32.0600272851296, Blast_Score=315, Evalue=9e-86,
Organism=Caenorhabditis elegans, GI25147430, Length=728, Percent_Identity=31.5934065934066, Blast_Score=320, Evalue=2e-87,
Organism=Drosophila melanogaster, GI20129985, Length=748, Percent_Identity=31.1497326203209, Blast_Score=301, Evalue=8e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819
- InterPro:   IPR004879
- InterPro:   IPR005198
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76 [H]

EC number: NA

Molecular weight: Translated: 70316; Mature: 70185

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPAGNELGGATSPYLRQHADNPVHWRQWTPAALAEAAERDVPILLSIGYAACHWCHVMA
CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHH
HESFEDDEVAAAANADFVCIKVDREERPDLDAVYMNATVALTGQGGWPMTCFLTPDGRPF
HCCCCCCHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCEE
FCGTYYPKPNFLQLLAAVAETWRERRGEVEEASDRIAGELRNMAAGLPGGGPQVRPELCD
EEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
AAVAAVLRDEDTARGGFGDAPKFPPSALLEALLRHHERTGSPESLATMERTATAMARGGI
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
YDQLAGGFARYSVDAEWVVPHFEKMLYDNALLLRAYAHWARRTGDPLARRVAGETARFLI
HHHHCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHH
DDMGADAMFTSSLDADADGVEGLTYAWTPAQLRDVLGDDDGRWAATVFGVTDAGTFEHGT
HHCCCCCEEECCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHH
SVLQLLADADDPARLERVRTALRAARSTRPQPGRDDKVVTAWNGLAITALAEAAVALGDP
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEHHHHHHHHHHCCCH
ELLDAATGCARAVVDLHVVDGRLRRASLGGRVGESAAILEDHAALATGLLTVHQATGDAR
HHHHHHHHHHHHHHEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCHH
WLETGLHLVDVALDHFADPQRDGYWFDTADDAEALVLRPSDPFDGATPSGASLIAEALQL
HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH
AAHLAPSARAGRYGAAADATLATAALILERAPRSGGHWLAVAEAAVRGPIQIAVACDPAA
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCEEEEEECCHHH
SELLAAARVLAPGGAIVVGGPVGSSELLTDRDRVRGADAAYVCRGRVCDLPVTTQDELAA
HHHHHHHHHHCCCCEEEEECCCCCHHHHCCHHHHCCCCCEEEECCCEECCCCCCHHHHHH
ALTV
HHCC
>Mature Secondary Structure 
SPAGNELGGATSPYLRQHADNPVHWRQWTPAALAEAAERDVPILLSIGYAACHWCHVMA
CCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHH
HESFEDDEVAAAANADFVCIKVDREERPDLDAVYMNATVALTGQGGWPMTCFLTPDGRPF
HCCCCCCHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCEE
FCGTYYPKPNFLQLLAAVAETWRERRGEVEEASDRIAGELRNMAAGLPGGGPQVRPELCD
EEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
AAVAAVLRDEDTARGGFGDAPKFPPSALLEALLRHHERTGSPESLATMERTATAMARGGI
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
YDQLAGGFARYSVDAEWVVPHFEKMLYDNALLLRAYAHWARRTGDPLARRVAGETARFLI
HHHHCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHH
DDMGADAMFTSSLDADADGVEGLTYAWTPAQLRDVLGDDDGRWAATVFGVTDAGTFEHGT
HHCCCCCEEECCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHH
SVLQLLADADDPARLERVRTALRAARSTRPQPGRDDKVVTAWNGLAITALAEAAVALGDP
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEHHHHHHHHHHCCCH
ELLDAATGCARAVVDLHVVDGRLRRASLGGRVGESAAILEDHAALATGLLTVHQATGDAR
HHHHHHHHHHHHHHEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCHH
WLETGLHLVDVALDHFADPQRDGYWFDTADDAEALVLRPSDPFDGATPSGASLIAEALQL
HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH
AAHLAPSARAGRYGAAADATLATAALILERAPRSGGHWLAVAEAAVRGPIQIAVACDPAA
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCEEEEEECCHHH
SELLAAARVLAPGGAIVVGGPVGSSELLTDRDRVRGADAAYVCRGRVCDLPVTTQDELAA
HHHHHHHHHHCCCCEEEEECCCCCHHHHCCHHHHCCCCCEEEECCCEECCCCCCHHHHHH
ALTV
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]