| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108801099
Identifier: 108801099
GI number: 108801099
Start: 4402007
End: 4402426
Strand: Reverse
Name: 108801099
Synonym: Mmcs_4135
Alternate gene names: NA
Gene position: 4402426-4402007 (Counterclockwise)
Preceding gene: 108801100
Following gene: 108801098
Centisome position: 77.16
GC content: 72.38
Gene sequence:
>420_bases ATGACCGCCGTCCACAACTCCGTCCTCACCCGCCCGCTGTCCGACTCCACCGATTCGCTGCTGCGTTTCGCGCTGCGCGC CGACGCGACCCTGTGCGCGGCGCTCGGCCTGTTCGTCGCGATGGCCGCCGATCCGCTGTCGCGGCTCTCAGGGTTGTCGG CCACCGCCGAATGGATCGGCGGCGCACTGCTCGTCGGCTACGGCGCCCTGCTCTACGTGCTGGCCGCCGTACCCGACGTG CGCCGCGTGGGGGTCGGTGCGCTGGCCGGCAACGTCGGTTTCGCGATCGCCGTCGCGGCCGTGCTCATCGGCGGGTGGTT GCCGCTGACCCCGGCGGGGGTGGCCATGACCGCCACGTTCGCCGCGCTGACGTTGGCCCTCGCCTACCTGCAGTACCTCG GAGTGCGCCGTCTGGTGTGA
Upstream 100 bases:
>100_bases TGCGGTTGGCAGTAGTCGGCAGCGTTCGGTGTCGATCTGGCAGTGCGCTTCTCGCAGCATCGGTGGTGTCCGAGGAAGCC TCAACGCCGAGGAGCCAGCA
Downstream 100 bases:
>100_bases CGCCCGCACCCGGCCCCCCTGATCTCACGAATGAACCCACCACCGAAGGAGAAGAAATGACCGTCACCGCCCCCACCCAG ACCCGGGACCGCCTGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MTAVHNSVLTRPLSDSTDSLLRFALRADATLCAALGLFVAMAADPLSRLSGLSATAEWIGGALLVGYGALLYVLAAVPDV RRVGVGALAGNVGFAIAVAAVLIGGWLPLTPAGVAMTATFAALTLALAYLQYLGVRRLV
Sequences:
>Translated_139_residues MTAVHNSVLTRPLSDSTDSLLRFALRADATLCAALGLFVAMAADPLSRLSGLSATAEWIGGALLVGYGALLYVLAAVPDV RRVGVGALAGNVGFAIAVAAVLIGGWLPLTPAGVAMTATFAALTLALAYLQYLGVRRLV >Mature_138_residues TAVHNSVLTRPLSDSTDSLLRFALRADATLCAALGLFVAMAADPLSRLSGLSATAEWIGGALLVGYGALLYVLAAVPDVR RVGVGALAGNVGFAIAVAAVLIGGWLPLTPAGVAMTATFAALTLALAYLQYLGVRRLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14139; Mature: 14008
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVHNSVLTRPLSDSTDSLLRFALRADATLCAALGLFVAMAADPLSRLSGLSATAEWIG CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH GALLVGYGALLYVLAAVPDVRRVGVGALAGNVGFAIAVAAVLIGGWLPLTPAGVAMTATF HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH AALTLALAYLQYLGVRRLV HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TAVHNSVLTRPLSDSTDSLLRFALRADATLCAALGLFVAMAADPLSRLSGLSATAEWIG CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH GALLVGYGALLYVLAAVPDVRRVGVGALAGNVGFAIAVAAVLIGGWLPLTPAGVAMTATF HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH AALTLALAYLQYLGVRRLV HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA