| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801060
Identifier: 108801060
GI number: 108801060
Start: 4365500
End: 4365880
Strand: Reverse
Name: 108801060
Synonym: Mmcs_4096
Alternate gene names: NA
Gene position: 4365880-4365500 (Counterclockwise)
Preceding gene: 108801063
Following gene: 108801059
Centisome position: 76.52
GC content: 60.37
Gene sequence:
>381_bases GTGACGTCGTGCGCGAGACGCGGTCGTATATTCGGGGCTGTGACTGGAGATTGGCGCATCGACCGGGTCGATGAGATTCG GTCGCTGATCAAGCAGGCCGAGCCCGACGTGGTCGAGGAGATCAAGTGGCGCAAGCCGTCGAATCCCGACGGAGTGCCTG CGTTCTCGCTGGATGGTCTGATCTGCACACTGGAGATGTACAAGGGCAAGGTCAAGGTGAACTTCGCCAAGGGATCGTCC ATCAGTGACCCGGACAATTTGTTCAACGCGAGTCTTCAGGCGCCCGTCGGGCGCTCCATCGACGTTCGTGAAGACGACGA GTTGGACCCGGACGCGTTCAAGGCGCTGATCCAAGAGGCGGTCAGGGTCAACCGGAGTTAG
Upstream 100 bases:
>100_bases CCGGTCCTTGAAGGCGCGCTTCGGAGCCGTCGTGGTGCTGTTCACCTATTCAATGTAATACTTGAATAAGGGATGATGCG ACGAGCGGGCGTGAAGATTG
Downstream 100 bases:
>100_bases CAATCGGGTGTAGCCGCCCTGCAGTATGGACCGAATGAACGGCGGCGACCTGCGTGACGTCTACCGCGCCTACCTGGCCT GCCTGAATGAGCGCCGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MTSCARRGRIFGAVTGDWRIDRVDEIRSLIKQAEPDVVEEIKWRKPSNPDGVPAFSLDGLICTLEMYKGKVKVNFAKGSS ISDPDNLFNASLQAPVGRSIDVREDDELDPDAFKALIQEAVRVNRS
Sequences:
>Translated_126_residues MTSCARRGRIFGAVTGDWRIDRVDEIRSLIKQAEPDVVEEIKWRKPSNPDGVPAFSLDGLICTLEMYKGKVKVNFAKGSS ISDPDNLFNASLQAPVGRSIDVREDDELDPDAFKALIQEAVRVNRS >Mature_125_residues TSCARRGRIFGAVTGDWRIDRVDEIRSLIKQAEPDVVEEIKWRKPSNPDGVPAFSLDGLICTLEMYKGKVKVNFAKGSSI SDPDNLFNASLQAPVGRSIDVREDDELDPDAFKALIQEAVRVNRS
Specific function: Unknown
COG id: COG5649
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14021; Mature: 13890
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSCARRGRIFGAVTGDWRIDRVDEIRSLIKQAEPDVVEEIKWRKPSNPDGVPAFSLDGL CCCCCCCCCEEEEECCCEEECCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCEEECCCE ICTLEMYKGKVKVNFAKGSSISDPDNLFNASLQAPVGRSIDVREDDELDPDAFKALIQEA EEEEEECCCEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH VRVNRS HHHCCC >Mature Secondary Structure TSCARRGRIFGAVTGDWRIDRVDEIRSLIKQAEPDVVEEIKWRKPSNPDGVPAFSLDGL CCCCCCCCEEEEECCCEEECCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCEEECCCE ICTLEMYKGKVKVNFAKGSSISDPDNLFNASLQAPVGRSIDVREDDELDPDAFKALIQEA EEEEEECCCEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH VRVNRS HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA