| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108801051
Identifier: 108801051
GI number: 108801051
Start: 4355694
End: 4356314
Strand: Reverse
Name: 108801051
Synonym: Mmcs_4087
Alternate gene names: NA
Gene position: 4356314-4355694 (Counterclockwise)
Preceding gene: 108801052
Following gene: 108801050
Centisome position: 76.35
GC content: 69.24
Gene sequence:
>621_bases GTGACCGACACCCCGAAAGAGGAACAGACGACGGTCGAGCAGTTCGAACCCGAGGCGACCGCCGTCGAGGAACCCACTGC CGAGTCGTCGACGGCCGACGAGCCCGCGGCTGCCCCGGCGGTCGCCACGCGCCGCTCGATCCCGTGGGAGCGGGTCTTCG CCTACGGCGTCGTGCCCGCGCTCGCCCTCGTGCTCGCCGTCGCCGGCGGGTACCTGTTCTGGCGGAACTACACCGCCGAT GCGGCGGAGCAGGCGCGGGAGGATTCGGTCGCCGCGGCCCGCAGCATCGCGATCTCGATGCTCACCTACGAGCCTCAGTC CGTCGAACAGCAACTCGGGGCCGCCAAAGAGCAGCTCACCGGAACCTTCCGCGACACCTACAGTTCGCTGATCGACACCG TCGTCGTACCGGGTGCCAAGGAGCGACAGATCTCGGCCGTCACCGACGTCCCCGCGGCCGCTTCGGTCAGCGCGGAGCCC GATCACGCGGTGGTGCTGCTGTTCGTCAACCAGACGGTCACCGTCGGCTCGGAACCCCCGACCAATACGGCCTCCAGCGT CCGGGTCACCCTCGACAAGGTCGGCGACCATTGGCGCGTGTCCGAGTTCCAGCCGATCTGA
Upstream 100 bases:
>100_bases ACGCCGGCGCGCCGGAGCAGCCTCCGCGCGCGTGGCGGATGCGGCTCACCGTGCAGCGGGTCGACGACGGCGCGAAGGTC TCACAGGTGGAGTTCGTGCA
Downstream 100 bases:
>100_bases TGACGCCGCGCTGGTTGGATGTGGCGACCCCGGCCGGGCAGCTGCGGGCGCTGGTCTGGGGTCCGGAGGACGGTCCGGTC GCGCTGTGCCTGCACGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTDTPKEEQTTVEQFEPEATAVEEPTAESSTADEPAAAPAVATRRSIPWERVFAYGVVPALALVLAVAGGYLFWRNYTAD AAEQAREDSVAAARSIAISMLTYEPQSVEQQLGAAKEQLTGTFRDTYSSLIDTVVVPGAKERQISAVTDVPAAASVSAEP DHAVVLLFVNQTVTVGSEPPTNTASSVRVTLDKVGDHWRVSEFQPI
Sequences:
>Translated_206_residues MTDTPKEEQTTVEQFEPEATAVEEPTAESSTADEPAAAPAVATRRSIPWERVFAYGVVPALALVLAVAGGYLFWRNYTAD AAEQAREDSVAAARSIAISMLTYEPQSVEQQLGAAKEQLTGTFRDTYSSLIDTVVVPGAKERQISAVTDVPAAASVSAEP DHAVVLLFVNQTVTVGSEPPTNTASSVRVTLDKVGDHWRVSEFQPI >Mature_205_residues TDTPKEEQTTVEQFEPEATAVEEPTAESSTADEPAAAPAVATRRSIPWERVFAYGVVPALALVLAVAGGYLFWRNYTADA AEQAREDSVAAARSIAISMLTYEPQSVEQQLGAAKEQLTGTFRDTYSSLIDTVVVPGAKERQISAVTDVPAAASVSAEPD HAVVLLFVNQTVTVGSEPPTNTASSVRVTLDKVGDHWRVSEFQPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1363c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22023; Mature: 21891
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTPKEEQTTVEQFEPEATAVEEPTAESSTADEPAAAPAVATRRSIPWERVFAYGVVPA CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHH LALVLAVAGGYLFWRNYTADAAEQAREDSVAAARSIAISMLTYEPQSVEQQLGAAKEQLT HHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHH GTFRDTYSSLIDTVVVPGAKERQISAVTDVPAAASVSAEPDHAVVLLFVNQTVTVGSEPP HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEECCEEEECCCCC TNTASSVRVTLDKVGDHWRVSEFQPI CCCCCCEEEEHHHCCCCEECCCCCCC >Mature Secondary Structure TDTPKEEQTTVEQFEPEATAVEEPTAESSTADEPAAAPAVATRRSIPWERVFAYGVVPA CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHH LALVLAVAGGYLFWRNYTADAAEQAREDSVAAARSIAISMLTYEPQSVEQQLGAAKEQLT HHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHH GTFRDTYSSLIDTVVVPGAKERQISAVTDVPAAASVSAEPDHAVVLLFVNQTVTVGSEPP HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEECCEEEECCCCC TNTASSVRVTLDKVGDHWRVSEFQPI CCCCCCEEEEHHHCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]