| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is malE [C]
Identifier: 108800947
GI number: 108800947
Start: 4249104
End: 4250501
Strand: Reverse
Name: malE [C]
Synonym: Mmcs_3983
Alternate gene names: 108800947
Gene position: 4250501-4249104 (Counterclockwise)
Preceding gene: 108800948
Following gene: 108800946
Centisome position: 74.5
GC content: 68.17
Gene sequence:
>1398_bases GTGCGCGCTCGGCGGCTCTGTGCTGCAGCAGTCACCGCGCTGACGACCGCGTCGATGGTTTCGGCGTGTGGATCCGGCGG CGGTGGGCTGGTCATCAACTACTACACCCCGGCGAACGAGGCGGCGACGTTCACCGCCGTCGCCAACCGCTGTAACGAAG AACTGGGTGGCCGGTTCCGGATCGAACAGCGCAACCTGCCGAAGGGCGCCGACGACCAGCGCCTACAGCTGGCGCGCCGG CTCACCGGCAACGACACCTCACTGGACGTGATGGCGCTCGACGTGGTGTGGACCGCCGAATTCGCCGAAGCAGGCTGGGC GCTGCCGCTCTCGGACGATCCGGCCGGACTTGCCGAGGCCGATGCCACCGCCAACACGCTGCCCGGACCCCTTGAGACCG CGAAATGGCAGGACAAGCTCTACGCGGCGCCGATCACCACCAACACCCAGTTGTTGTGGTACCGGGCCGATCTCATCCCG CAACCGCCTACGACGTGGGACGGGATGGTCGCTGAGGCCACCCGGTTGCATGCCGCGGGTGGTCCGAGTTGGATCGCGGT GCAGGGCAAGCAGTACGAGGGCCTGATGGTCTGGTTCAACACGCTACTGGAGAGCGCCGGCGGGCAGGTGCTCTCCGACG ACGGTGAGCGTGTCACCTTGACCGACACCCCGGAGCACCGGGCCGCCACGGTCAAGGCGCTGCAGATCATCAAGTCTGTG GCGACCGCCCCGGGGGCGGATCCGTCGATCACCCAGACCGACGAGACGACCGCACGCCTCGCGCTCGAGCAGGGCAAGGC CGCGCTCGAGGTCAACTGGCCCTACGTGCTGCCGTCGCTGCTGGAGAACGCCGTCAAGGGTGGCGTGCCGTTCCTGCCGC TGAATCAGGACCCGTCGCTGACCGGGGCGATCAACGACGTGGGCTCTTTCTCACCGAGCGACGAGCAGTTCCGGACCGCC TTCGACGCGAGCCGGCCCGTGTTCGGCTTCGCGCCGTATCCCGGGGTGCAACCCGGCGACCCGGCGCGGGTCACGCTGGG CGGTCTGAACCTGGCCGTGGCCAGGACGACCCAGCACCGCGCCGAGGCCTTCGAGGCGATCCGGTGCCTGCGCAACGTCG AGAACCAGCGGTACACCTCGGTCGAGGGTGGACTGCCCGCGGTGCGGGCGTCGCTGTACGACGATCCGGCGTTCCAGGCG AAATACCCGCAGTACGAGATCATCCGCGATCAGTTGACGAACGCCGCGGTCCGGCCGGCCTCACCGGTGTACCAGGCGAT GTCGACGCGGATCACGGTGACGCTGGCACCGATATCGGACATCGATCCGGAACGGACCGCCGATGAACTCACCGAGCAGG TCCAGAAGGCCATCGACGGCAAGGGGTTGATCCCGTGA
Upstream 100 bases:
>100_bases TGTTGCACATCACGCGCGTCTCCCTCTACGGTTTGCCCGCGGGAAGTTCCCCGCCCGGGCCGCTCGACGCGGCCAGAGGG GAACAGACGGGAGGCTGGTG
Downstream 100 bases:
>100_bases CGGCCACCGCAGCGCCCGCCCCGCCGACCGAGGTGCGCGGCGGCAGCGACGACTCCCGTTCGGACCGCCGGCTGGCCTTC ATGCTGATCGCCCCGGCGGT
Product: extracellular solute-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MRARRLCAAAVTALTTASMVSACGSGGGGLVINYYTPANEAATFTAVANRCNEELGGRFRIEQRNLPKGADDQRLQLARR LTGNDTSLDVMALDVVWTAEFAEAGWALPLSDDPAGLAEADATANTLPGPLETAKWQDKLYAAPITTNTQLLWYRADLIP QPPTTWDGMVAEATRLHAAGGPSWIAVQGKQYEGLMVWFNTLLESAGGQVLSDDGERVTLTDTPEHRAATVKALQIIKSV ATAPGADPSITQTDETTARLALEQGKAALEVNWPYVLPSLLENAVKGGVPFLPLNQDPSLTGAINDVGSFSPSDEQFRTA FDASRPVFGFAPYPGVQPGDPARVTLGGLNLAVARTTQHRAEAFEAIRCLRNVENQRYTSVEGGLPAVRASLYDDPAFQA KYPQYEIIRDQLTNAAVRPASPVYQAMSTRITVTLAPISDIDPERTADELTEQVQKAIDGKGLIP
Sequences:
>Translated_465_residues MRARRLCAAAVTALTTASMVSACGSGGGGLVINYYTPANEAATFTAVANRCNEELGGRFRIEQRNLPKGADDQRLQLARR LTGNDTSLDVMALDVVWTAEFAEAGWALPLSDDPAGLAEADATANTLPGPLETAKWQDKLYAAPITTNTQLLWYRADLIP QPPTTWDGMVAEATRLHAAGGPSWIAVQGKQYEGLMVWFNTLLESAGGQVLSDDGERVTLTDTPEHRAATVKALQIIKSV ATAPGADPSITQTDETTARLALEQGKAALEVNWPYVLPSLLENAVKGGVPFLPLNQDPSLTGAINDVGSFSPSDEQFRTA FDASRPVFGFAPYPGVQPGDPARVTLGGLNLAVARTTQHRAEAFEAIRCLRNVENQRYTSVEGGLPAVRASLYDDPAFQA KYPQYEIIRDQLTNAAVRPASPVYQAMSTRITVTLAPISDIDPERTADELTEQVQKAIDGKGLIP >Mature_465_residues MRARRLCAAAVTALTTASMVSACGSGGGGLVINYYTPANEAATFTAVANRCNEELGGRFRIEQRNLPKGADDQRLQLARR LTGNDTSLDVMALDVVWTAEFAEAGWALPLSDDPAGLAEADATANTLPGPLETAKWQDKLYAAPITTNTQLLWYRADLIP QPPTTWDGMVAEATRLHAAGGPSWIAVQGKQYEGLMVWFNTLLESAGGQVLSDDGERVTLTDTPEHRAATVKALQIIKSV ATAPGADPSITQTDETTARLALEQGKAALEVNWPYVLPSLLENAVKGGVPFLPLNQDPSLTGAINDVGSFSPSDEQFRTA FDASRPVFGFAPYPGVQPGDPARVTLGGLNLAVARTTQHRAEAFEAIRCLRNVENQRYTSVEGGLPAVRASLYDDPAFQA KYPQYEIIRDQLTNAAVRPASPVYQAMSTRITVTLAPISDIDPERTADELTEQVQKAIDGKGLIP
Specific function: Probably part of a binding-protein-dependent transport system [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 49848; Mature: 49848
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARRLCAAAVTALTTASMVSACGSGGGGLVINYYTPANEAATFTAVANRCNEELGGRFR CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEE IEQRNLPKGADDQRLQLARRLTGNDTSLDVMALDVVWTAEFAEAGWALPLSDDPAGLAEA EECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEHHHHHCCCCCCCCCCCCCCCCC DATANTLPGPLETAKWQDKLYAAPITTNTQLLWYRADLIPQPPTTWDGMVAEATRLHAAG CCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCC GPSWIAVQGKQYEGLMVWFNTLLESAGGQVLSDDGERVTLTDTPEHRAATVKALQIIKSV CCCEEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHH ATAPGADPSITQTDETTARLALEQGKAALEVNWPYVLPSLLENAVKGGVPFLPLNQDPSL HCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCC TGAINDVGSFSPSDEQFRTAFDASRPVFGFAPYPGVQPGDPARVTLGGLNLAVARTTQHR CCCHHHHCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEECCCEEEEEECHHHH AEAFEAIRCLRNVENQRYTSVEGGLPAVRASLYDDPAFQAKYPQYEIIRDQLTNAAVRPA HHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC SPVYQAMSTRITVTLAPISDIDPERTADELTEQVQKAIDGKGLIP HHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRARRLCAAAVTALTTASMVSACGSGGGGLVINYYTPANEAATFTAVANRCNEELGGRFR CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEE IEQRNLPKGADDQRLQLARRLTGNDTSLDVMALDVVWTAEFAEAGWALPLSDDPAGLAEA EECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEHHHHHCCCCCCCCCCCCCCCCC DATANTLPGPLETAKWQDKLYAAPITTNTQLLWYRADLIPQPPTTWDGMVAEATRLHAAG CCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCC GPSWIAVQGKQYEGLMVWFNTLLESAGGQVLSDDGERVTLTDTPEHRAATVKALQIIKSV CCCEEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHH ATAPGADPSITQTDETTARLALEQGKAALEVNWPYVLPSLLENAVKGGVPFLPLNQDPSL HCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCC TGAINDVGSFSPSDEQFRTAFDASRPVFGFAPYPGVQPGDPARVTLGGLNLAVARTTQHR CCCHHHHCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEECCCEEEEEECHHHH AEAFEAIRCLRNVENQRYTSVEGGLPAVRASLYDDPAFQAKYPQYEIIRDQLTNAAVRPA HHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC SPVYQAMSTRITVTLAPISDIDPERTADELTEQVQKAIDGKGLIP HHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]