Click here to switch to the map view.

The map label for this gene is 108800878

Identifier: 108800878

GI number: 108800878

Start: 4167766

End: 4169361

Strand: Reverse

Name: 108800878

Synonym: Mmcs_3914

Alternate gene names: NA

Gene position: 4169361-4167766 (Counterclockwise)

Preceding gene: 108800879

Following gene: 108800877

Centisome position: 73.08

GC content: 72.06

Gene sequence:

>1596_bases
GTGGCAGTGGATTCCGAACGATCTGACGGACCGCCCCGGCGTCGGCGCGCACTGAATCTCGCGCTGCGGGGCCGACGCGA
CCCGGCATCGGGTGCGGGCCAGCGCCGGCGGGTGTCGGGTGGGCTGAGCGAGCGGCACACCCGCAAGGTCCTCGACCTGA
CCGTCCGCCTCGCCGAGGTGATGCTGTCCTCCGGGTCGGGTACCGCCGACGTCGTCGCGACGGCGCAGGACGTCGCGCAG
GCCTACCAGCTCACCGACTGTGTCGTCGACGTCTTCGTCACCACCATCTTCGTATCGGCGCTGCCGACCGCCGACAGCCC
GCCGGTGACGATCGTGCGGGCAGTCCACGCACGCTCGACCGACTACTCGCGGCTCGCCGAACTCGACCTGCTCGTCCGGC
GGATCACCTCCGGCGGCGTATCGGTCGACGAGGCCCACGAGGCGATGGACGAGCTGACCGAGCGGCCCCACCCGTATCCA
CGCTGGGTCGCCACCGCGGGGTGGGCCGGTTTCGCCCTGGGCATCGCGATGCTGCTCGGCGGAAGCTGGTTGACCTGGAT
CCTGGCCGCGGTCTCCTCGGCGCTGATCGATCGGGTCGGCCGGGTGCTCAACCGGTGGGGCACGCCGTTCTTCTTCCAGC
AGGCGGCGGGCGCGTTCATCGCGACGATGATCGCCGTCGCGGCGTACCTCTACGCCGGGGTGGGGCCCACCGCCCTGGTG
GCGACCGGGATCGTCATGCTGCTGGCGGGTCTGACCCTGGTGGGTTCGGTGCAGGACGCGCTGACCGGTTACATGGTCAC
CGCGGTGGCCCGCCTCGGTGACGTCCTGTTCCTCACCGCGGGCATCGTCGTCGGCATCCTGGCCGGGCTGCAGGTCGCCG
CGCTCGCCGGGATCCAGATCGAGCTCCACGTCGACGCCACGGAGTCGTTCGTGATGCCGACCCGGCCGGTGCCGATCCTG
CTCGCGGTGCTGGGTGCCGCGCTTGCTGGCGCCTGCCTGACGGTCGCCAGCTATGCGCGGCTGCGCTCGGTGCTCACCGC
GGGTGTCGCCGCAGGGCTGGCGGAGGCGGTGCTGATCGGTCTGGGCGCAGCCGGGGTCGGCGGGGTGGTCGCCACCGGGA
CCGCGGCCGTCGGCGTCGGTTTGCTGGCCACCCTGATCTCGATTCGCCGGCAGGCTCCGGCCCTGGTCACCGCCACCGCG
GGCATCACTCCGATGCTGCCGGGCCTCGCGGTGTTCCGTGCGGTGTTCTTCTTCGCCGTCGACCGCAACATCCCCGGTGG
GATTGCCCAGGCGCTGGGTGCCGCCGCCATCGCACTGGCCATCGGGGCCGGTGTCGTGATGGGCGAGTTGCTCGGCTCCC
CGCTGCGCTACCGCGCCGGGCGTATCGGCGACTTCCTGCGCGTCGAAGGGCCGCCCGGGCTTCGCCGGGCGATCGGCAAT
GTGGTTGCGCTGCGGCCGTCCGCCGGCCAGCAGCAGGCACGTACCCCGCACCGGCGGTCATGGAGCGTGGCCCTCGAACC
GAAGGTCAAGAATTCGGCGGCCGACGACGACGAGGCGTCCGCAGGCCCCTCGGATGGTGAAAACGCGGAGCGGTAA

Upstream 100 bases:

>100_bases
GGCCGGTGACTACCTCGACCAGGAGCGCAAACGCGGCCACCACCACCGCGTGGACTCGAAATAGTCTGCACCTGAGCTCA
TTCGCGGCATCAGTATCGTC

Downstream 100 bases:

>100_bases
CGTCGGTTGCCGACCAGCGAGAGGAACCTGTGGATTCCGAACATGATCGGCAAGATGATCGACCGACCACCGCCGACGGC
CACCCCGACCCTGGAGTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Transmembrane Protein; Threonine Export Protein; Membrane Spanning Protein

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MAVDSERSDGPPRRRRALNLALRGRRDPASGAGQRRRVSGGLSERHTRKVLDLTVRLAEVMLSSGSGTADVVATAQDVAQ
AYQLTDCVVDVFVTTIFVSALPTADSPPVTIVRAVHARSTDYSRLAELDLLVRRITSGGVSVDEAHEAMDELTERPHPYP
RWVATAGWAGFALGIAMLLGGSWLTWILAAVSSALIDRVGRVLNRWGTPFFFQQAAGAFIATMIAVAAYLYAGVGPTALV
ATGIVMLLAGLTLVGSVQDALTGYMVTAVARLGDVLFLTAGIVVGILAGLQVAALAGIQIELHVDATESFVMPTRPVPIL
LAVLGAALAGACLTVASYARLRSVLTAGVAAGLAEAVLIGLGAAGVGGVVATGTAAVGVGLLATLISIRRQAPALVTATA
GITPMLPGLAVFRAVFFFAVDRNIPGGIAQALGAAAIALAIGAGVVMGELLGSPLRYRAGRIGDFLRVEGPPGLRRAIGN
VVALRPSAGQQQARTPHRRSWSVALEPKVKNSAADDDEASAGPSDGENAER

Sequences:

>Translated_531_residues
MAVDSERSDGPPRRRRALNLALRGRRDPASGAGQRRRVSGGLSERHTRKVLDLTVRLAEVMLSSGSGTADVVATAQDVAQ
AYQLTDCVVDVFVTTIFVSALPTADSPPVTIVRAVHARSTDYSRLAELDLLVRRITSGGVSVDEAHEAMDELTERPHPYP
RWVATAGWAGFALGIAMLLGGSWLTWILAAVSSALIDRVGRVLNRWGTPFFFQQAAGAFIATMIAVAAYLYAGVGPTALV
ATGIVMLLAGLTLVGSVQDALTGYMVTAVARLGDVLFLTAGIVVGILAGLQVAALAGIQIELHVDATESFVMPTRPVPIL
LAVLGAALAGACLTVASYARLRSVLTAGVAAGLAEAVLIGLGAAGVGGVVATGTAAVGVGLLATLISIRRQAPALVTATA
GITPMLPGLAVFRAVFFFAVDRNIPGGIAQALGAAAIALAIGAGVVMGELLGSPLRYRAGRIGDFLRVEGPPGLRRAIGN
VVALRPSAGQQQARTPHRRSWSVALEPKVKNSAADDDEASAGPSDGENAER
>Mature_530_residues
AVDSERSDGPPRRRRALNLALRGRRDPASGAGQRRRVSGGLSERHTRKVLDLTVRLAEVMLSSGSGTADVVATAQDVAQA
YQLTDCVVDVFVTTIFVSALPTADSPPVTIVRAVHARSTDYSRLAELDLLVRRITSGGVSVDEAHEAMDELTERPHPYPR
WVATAGWAGFALGIAMLLGGSWLTWILAAVSSALIDRVGRVLNRWGTPFFFQQAAGAFIATMIAVAAYLYAGVGPTALVA
TGIVMLLAGLTLVGSVQDALTGYMVTAVARLGDVLFLTAGIVVGILAGLQVAALAGIQIELHVDATESFVMPTRPVPILL
AVLGAALAGACLTVASYARLRSVLTAGVAAGLAEAVLIGLGAAGVGGVVATGTAAVGVGLLATLISIRRQAPALVTATAG
ITPMLPGLAVFRAVFFFAVDRNIPGGIAQALGAAAIALAIGAGVVMGELLGSPLRYRAGRIGDFLRVEGPPGLRRAIGNV
VALRPSAGQQQARTPHRRSWSVALEPKVKNSAADDDEASAGPSDGENAER

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54727; Mature: 54596

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVDSERSDGPPRRRRALNLALRGRRDPASGAGQRRRVSGGLSERHTRKVLDLTVRLAEV
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
MLSSGSGTADVVATAQDVAQAYQLTDCVVDVFVTTIFVSALPTADSPPVTIVRAVHARST
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
DYSRLAELDLLVRRITSGGVSVDEAHEAMDELTERPHPYPRWVATAGWAGFALGIAMLLG
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHC
GSWLTWILAAVSSALIDRVGRVLNRWGTPFFFQQAAGAFIATMIAVAAYLYAGVGPTALV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ATGIVMLLAGLTLVGSVQDALTGYMVTAVARLGDVLFLTAGIVVGILAGLQVAALAGIQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
ELHVDATESFVMPTRPVPILLAVLGAALAGACLTVASYARLRSVLTAGVAAGLAEAVLIG
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAAGVGGVVATGTAAVGVGLLATLISIRRQAPALVTATAGITPMLPGLAVFRAVFFFAV
CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
DRNIPGGIAQALGAAAIALAIGAGVVMGELLGSPLRYRAGRIGDFLRVEGPPGLRRAIGN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEECCCCHHHHHHCC
VVALRPSAGQQQARTPHRRSWSVALEPKVKNSAADDDEASAGPSDGENAER
EEEECCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVDSERSDGPPRRRRALNLALRGRRDPASGAGQRRRVSGGLSERHTRKVLDLTVRLAEV
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH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EEEECCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA