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The map label for this gene is ybbN [C]

Identifier: 108800826

GI number: 108800826

Start: 4110373

End: 4111272

Strand: Reverse

Name: ybbN [C]

Synonym: Mmcs_3862

Alternate gene names: 108800826

Gene position: 4111272-4110373 (Counterclockwise)

Preceding gene: 108800827

Following gene: 108800823

Centisome position: 72.06

GC content: 71.56

Gene sequence:

>900_bases
GTGACACGTCCACGACCTTCCATCGGGCCGGCACTGGCCGGTGCGGTTGATCTGTCCGCGCTCAAACAACGCCCCGCCGC
CGAGGCGGCCGGGCCCGCCGGGGCAGGCGGCCCGGGCGGAGTCGAGATCACCGAGGCGAACCTCGAAGCCGAGGTGTTGA
TCCGGTCCAGTCAGGTTCCCGTGGTGGTGCTGCTGTGGTCACCCCGCAGCGACTCCAGCGTGGCACTGGGGCAGACGCTC
GCCGAGCTGGCGAACGCCGACGCCGGCAAGTGGTCGCTGGCGACGGTCAACGTCGACACCACGCCGCGGGTGGCGCAGAT
GTTCGGCGTGCAGGCGGTGCCGACGGTCGTCGCGCTCGCCGGAGGCCAGCCGATCTCGAGCTTCCAGGGGCCGCAGCCCG
CCGATCAGCTACGGCGCTGGATCGACTCGCTCCTCGAAGCGACGGCAGGCAAGCTCGCCGGATCCGGTGATCCCGACCAG
CCCGAGCAGGTCGACCCCGAGGTCGCGCAGGCACGCGCCTTCCTCGACAACGGCGACTTCGACGCCGCACTGAGCGCCTA
CCAGGCGATCCTCGACGCCCAGCCGAATCACGCCGAGGCCAAGGGCGCGGTCCGGCAGATCGTGTTCCTCCAACGTGCGA
CGACGCAGCGGCCGGACGCGGTGACCGTCGCCGACGCCGCACCCGACGACGTCGACGCCGCGTTCGCCGCGGCCGACGTC
GAGATCCTCCAGCAGCAGGTCGAGGCGGCGTTCGAGCGGTTGATCGCCTTGGTCAAGCGCACCGCGGGCGACGACCGCAC
CCGGGTGCGAACCCGGCTCATCGAGCTGTTCGAGCTCTTCGACCCGGCCGATCCCGAGGTCATCGCGGGCCGGCGCAAGC
TCGCCAACGCCCTGTACTGA

Upstream 100 bases:

>100_bases
ATATGGGCCGATCGCACGGGTCGGCTCGACGGCGACACCGTCTCCGCGGCGGGTCGGGCGGCCCGCCCCGCACCCGAAAC
AACGTGACAGACTTGCACGC

Downstream 100 bases:

>100_bases
GCGCCGTCAGGACAGCGGCGGCGCAGTCGGGGGCTCCTGGACGACGGGCGCCTCGGCGGCCACCGGCTCGAACCACAGCG
CCGACAGCGGCGGCAGCACC

Product: thioredoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTRPRPSIGPALAGAVDLSALKQRPAAEAAGPAGAGGPGGVEITEANLEAEVLIRSSQVPVVVLLWSPRSDSSVALGQTL
AELANADAGKWSLATVNVDTTPRVAQMFGVQAVPTVVALAGGQPISSFQGPQPADQLRRWIDSLLEATAGKLAGSGDPDQ
PEQVDPEVAQARAFLDNGDFDAALSAYQAILDAQPNHAEAKGAVRQIVFLQRATTQRPDAVTVADAAPDDVDAAFAAADV
EILQQQVEAAFERLIALVKRTAGDDRTRVRTRLIELFELFDPADPEVIAGRRKLANALY

Sequences:

>Translated_299_residues
MTRPRPSIGPALAGAVDLSALKQRPAAEAAGPAGAGGPGGVEITEANLEAEVLIRSSQVPVVVLLWSPRSDSSVALGQTL
AELANADAGKWSLATVNVDTTPRVAQMFGVQAVPTVVALAGGQPISSFQGPQPADQLRRWIDSLLEATAGKLAGSGDPDQ
PEQVDPEVAQARAFLDNGDFDAALSAYQAILDAQPNHAEAKGAVRQIVFLQRATTQRPDAVTVADAAPDDVDAAFAAADV
EILQQQVEAAFERLIALVKRTAGDDRTRVRTRLIELFELFDPADPEVIAGRRKLANALY
>Mature_298_residues
TRPRPSIGPALAGAVDLSALKQRPAAEAAGPAGAGGPGGVEITEANLEAEVLIRSSQVPVVVLLWSPRSDSSVALGQTLA
ELANADAGKWSLATVNVDTTPRVAQMFGVQAVPTVVALAGGQPISSFQGPQPADQLRRWIDSLLEATAGKLAGSGDPDQP
EQVDPEVAQARAFLDNGDFDAALSAYQAILDAQPNHAEAKGAVRQIVFLQRATTQRPDAVTVADAAPDDVDAAFAAADVE
ILQQQVEAAFERLIALVKRTAGDDRTRVRTRLIELFELFDPADPEVIAGRRKLANALY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=105, Percent_Identity=39.0476190476191, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 31351; Mature: 31220

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPRPSIGPALAGAVDLSALKQRPAAEAAGPAGAGGPGGVEITEANLEAEVLIRSSQVP
CCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCC
VVVLLWSPRSDSSVALGQTLAELANADAGKWSLATVNVDTTPRVAQMFGVQAVPTVVALA
EEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCHHHHHHHHHC
GGQPISSFQGPQPADQLRRWIDSLLEATAGKLAGSGDPDQPEQVDPEVAQARAFLDNGDF
CCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCH
DAALSAYQAILDAQPNHAEAKGAVRQIVFLQRATTQRPDAVTVADAAPDDVDAAFAAADV
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHH
EILQQQVEAAFERLIALVKRTAGDDRTRVRTRLIELFELFDPADPEVIAGRRKLANALY
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRPRPSIGPALAGAVDLSALKQRPAAEAAGPAGAGGPGGVEITEANLEAEVLIRSSQVP
CCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCC
VVVLLWSPRSDSSVALGQTLAELANADAGKWSLATVNVDTTPRVAQMFGVQAVPTVVALA
EEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCHHHHHHHHHC
GGQPISSFQGPQPADQLRRWIDSLLEATAGKLAGSGDPDQPEQVDPEVAQARAFLDNGDF
CCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCH
DAALSAYQAILDAQPNHAEAKGAVRQIVFLQRATTQRPDAVTVADAAPDDVDAAFAAADV
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHH
EILQQQVEAAFERLIALVKRTAGDDRTRVRTRLIELFELFDPADPEVIAGRRKLANALY
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]