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The map label for this gene is ccpA [H]

Identifier: 108800799

GI number: 108800799

Start: 4082390

End: 4083379

Strand: Reverse

Name: ccpA [H]

Synonym: Mmcs_3835

Alternate gene names: 108800799

Gene position: 4083379-4082390 (Counterclockwise)

Preceding gene: 108800800

Following gene: 108800798

Centisome position: 71.57

GC content: 70.4

Gene sequence:

>990_bases
GTGAACGGTAGGGGAACGGCGCGGCCCACCAAGGCCGACGTGGCCCGTCTCGCCAACGTGTCGACGGCCACCGTCAGCTA
CGTCCTCAACAACGTCGAGAGTCAGCGCATCTCGCCGCGCACCCGCGACGCCGTGCGCAAGGCCGCCGAGACGCTGGGCT
ACCGGCCGAATCTGGCCGCACGCAACCTCGCCGTCGGGGGTAGCGGGGTGGTGCTCTACATCGTGCCCCGGATCGCGCTC
GGCGAGCTGCCGATGGAGGTCGGCAGCCGGCTCACCACCGCACTGGCCCGCCACGGCATCGTCCTGTCGCTGCAGTTCGA
GACCGACGACGACCGCAATGTCGTCGACGCGATCAACGATCTGAACCCGGTCGCGGTCACGAGCGTGTTCCCGCTGACCG
GTGCGGCGCTCGCCGCCGCCGACGCGGCGGGCATCCCGCAGATCCATGTCGGCAGCGCACAGTTGCGTGCGCTGGGTGAT
CTGCACCTGTCCATCGGTGAACTGCGGATCACCCATCTGAAGGACCGCGGTCACCGCAGGCTCGCGTTCGCGTACTCCGA
TGTCGACAAGCTCCGCCCGTTGGGTGACTACTGGCTCGCCGGCCTGCAGGTCGCCGCCCGCGACCACGGGTTGCCCGAAC
TCACGGTGGGGACGCTCGCGACCGACGGCAGCGACGCCGCCCGGGTGGTGACCGGATGGGTCGAACAGGGTGTGACGGCC
GTGTGCGCGCAGAGCGACGAGACGGCGTTCGTGGTGTTGCACGGGCTGCGCGAAGCCGGTCTGCGGTGCCCCGCCGACCT
GGCCGTCATGGGCGTCGACGCGCGCCCGCTCGGTGCGGTGAGCGGTCCGCCGCTGACCTCGGTCGGCTTCGACGCGAAGG
AGATCGTCGACGTCGCGGTGGCGGCCATGATGGCCGAACTCGGCTACCCGATCGAGTACGAGCCCAACGCCCGCAAGGTC
GCCGGACTGATCCAGCGCGCCTCAACCTGA

Upstream 100 bases:

>100_bases
GTCGCGGCCGTCGTATCGCTGGCGACGCTGCTCACCCTGCGGGAGTCCGCCGGCCGGCCGCTGGCCGCGACAGTGGCCGC
TGACGTGCGACGATGAGCTG

Downstream 100 bases:

>100_bases
GCGTTACATCTGTCGGCGAATTTGTTGCTTCCAGGCACGCTTACGCGTGTAAGCTCCATACCGCGCGTACAGAGAGGCGG
ATTGTCCGTGACCGTGAGTG

Product: LacI family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MNGRGTARPTKADVARLANVSTATVSYVLNNVESQRISPRTRDAVRKAAETLGYRPNLAARNLAVGGSGVVLYIVPRIAL
GELPMEVGSRLTTALARHGIVLSLQFETDDDRNVVDAINDLNPVAVTSVFPLTGAALAAADAAGIPQIHVGSAQLRALGD
LHLSIGELRITHLKDRGHRRLAFAYSDVDKLRPLGDYWLAGLQVAARDHGLPELTVGTLATDGSDAARVVTGWVEQGVTA
VCAQSDETAFVVLHGLREAGLRCPADLAVMGVDARPLGAVSGPPLTSVGFDAKEIVDVAVAAMMAELGYPIEYEPNARKV
AGLIQRAST

Sequences:

>Translated_329_residues
MNGRGTARPTKADVARLANVSTATVSYVLNNVESQRISPRTRDAVRKAAETLGYRPNLAARNLAVGGSGVVLYIVPRIAL
GELPMEVGSRLTTALARHGIVLSLQFETDDDRNVVDAINDLNPVAVTSVFPLTGAALAAADAAGIPQIHVGSAQLRALGD
LHLSIGELRITHLKDRGHRRLAFAYSDVDKLRPLGDYWLAGLQVAARDHGLPELTVGTLATDGSDAARVVTGWVEQGVTA
VCAQSDETAFVVLHGLREAGLRCPADLAVMGVDARPLGAVSGPPLTSVGFDAKEIVDVAVAAMMAELGYPIEYEPNARKV
AGLIQRAST
>Mature_329_residues
MNGRGTARPTKADVARLANVSTATVSYVLNNVESQRISPRTRDAVRKAAETLGYRPNLAARNLAVGGSGVVLYIVPRIAL
GELPMEVGSRLTTALARHGIVLSLQFETDDDRNVVDAINDLNPVAVTSVFPLTGAALAAADAAGIPQIHVGSAQLRALGD
LHLSIGELRITHLKDRGHRRLAFAYSDVDKLRPLGDYWLAGLQVAARDHGLPELTVGTLATDGSDAARVVTGWVEQGVTA
VCAQSDETAFVVLHGLREAGLRCPADLAVMGVDARPLGAVSGPPLTSVGFDAKEIVDVAVAAMMAELGYPIEYEPNARKV
AGLIQRAST

Specific function: Transcriptional regulator involved in both the repression of carbohydrate utilization genes and in the positive regulation of genes involved in excretion of excess carbon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006377
- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 34589; Mature: 34589

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGRGTARPTKADVARLANVSTATVSYVLNNVESQRISPRTRDAVRKAAETLGYRPNLAA
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
RNLAVGGSGVVLYIVPRIALGELPMEVGSRLTTALARHGIVLSLQFETDDDRNVVDAIND
CEEEECCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHC
LNPVAVTSVFPLTGAALAAADAAGIPQIHVGSAQLRALGDLHLSIGELRITHLKDRGHRR
CCCCHHEEECCCCCHHHHHHHCCCCCEEEECCHHHHHHHHHHEECCCEEEEEECCCCCEE
LAFAYSDVDKLRPLGDYWLAGLQVAARDHGLPELTVGTLATDGSDAARVVTGWVEQGVTA
EEEEECCHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCEE
VCAQSDETAFVVLHGLREAGLRCPADLAVMGVDARPLGAVSGPPLTSVGFDAKEIVDVAV
EECCCCCEEEEEEECHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AAMMAELGYPIEYEPNARKVAGLIQRAST
HHHHHHHCCCEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNGRGTARPTKADVARLANVSTATVSYVLNNVESQRISPRTRDAVRKAAETLGYRPNLAA
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
RNLAVGGSGVVLYIVPRIALGELPMEVGSRLTTALARHGIVLSLQFETDDDRNVVDAIND
CEEEECCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHC
LNPVAVTSVFPLTGAALAAADAAGIPQIHVGSAQLRALGDLHLSIGELRITHLKDRGHRR
CCCCHHEEECCCCCHHHHHHHCCCCCEEEECCHHHHHHHHHHEECCCEEEEEECCCCCEE
LAFAYSDVDKLRPLGDYWLAGLQVAARDHGLPELTVGTLATDGSDAARVVTGWVEQGVTA
EEEEECCHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCEE
VCAQSDETAFVVLHGLREAGLRCPADLAVMGVDARPLGAVSGPPLTSVGFDAKEIVDVAV
EECCCCCEEEEEEECHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AAMMAELGYPIEYEPNARKVAGLIQRAST
HHHHHHHCCCEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12397186 [H]