| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800710
Identifier: 108800710
GI number: 108800710
Start: 3997780
End: 3999078
Strand: Reverse
Name: 108800710
Synonym: Mmcs_3745
Alternate gene names: NA
Gene position: 3999078-3997780 (Counterclockwise)
Preceding gene: 108800718
Following gene: 108800709
Centisome position: 70.09
GC content: 64.28
Gene sequence:
>1299_bases GTGAAGTACGACGACATGATTCTGATCAGCGTGGACGATCACATCATCGAACCGCCGAACATGTTCAAGAACCACCTGCC GGAGAAGTACATCAACGATGCGCCCCGGCTGGTGCACAATCCGGACGGCTCGGACACCTGGCAGTTCCGCGACACGGTCA TCCCCAACGTCGCGCTCAACGCGGTGGCCGGCCGGCCGAAGGAGGAGTACGGACTCGAACCGCAGGGCCTCGACGAGATC CGCAAGGGCTGCTACGACCCGAACGAACGGGTCAAGGACATGAACGCCGGCGGCGTGCTGGCGACGATGAACTTCCCGTC GTTCCCCGGCTTCGCTGCCCGCCTGTTCGCCACCGAGGACCCCGACTTCTCGCTCGCCCTGGTCCAGGCCTACAACGACT GGCACATCGACGAATGGTGTGGGAGCAACCCCGGCCGCTTCATCCCGATGGCGATCCCGGCCATCTGGGATCCGGAACTG TGCGCCCAGGAGGTGCGCCGGGTGTCGAAGAAGGGGGTGCACTCGCTGACGTTCACCGAGAACCCCTCGACGCTGGGTTA TCCGAGCTTCCACGACCTCGAGCACTGGCGGCCGCTCTGGGAGGCGCTGGTGGAGACCGAGACCATCATGAACGTCCACA TCGGGTCGTCGGGCAAGTTGGCGATCACCGCGCCGGACGCGCCGATGGACGTGATGATCACGCTGCAGCCGATGAACATC GTGCAGGCCGCGGCCGACCTGCTGTGGTCCGCGCCGATCAAGGAGTTCCCGACGCTCAAGATCGCGCTCAGCGAGGGCGG CACCGGCTGGATTCCGTACTTCCTCGACCGCGTGGACCGCACCTACGAGATGCATTCGACGTGGACGCACCAGAACTTCG GTGACAAGTTGCCCTCGGAGGTCTTCCGGGACCACTTCCTGACGTGCTTCATCTCCGATCCGGTCGGGGTGAAGAACCGC CACATGATCGGTATCGACAACATCTGCTGGGAGATGGACTACCCGCACAGCGATTCGATGTGGCCGGGTGCCCCCGAGGA ACTCGGCGCGGTGTTCGACACCTACGAGGTGACCGACGAGGAGATCAACAAGATCACCCACGAGAACGCCATGCGCTGGT ACCACTTCGAACCCTTCAAGCACATCCCCAAGGAGCAGGCCACGGTCGGTGCGCTGCGCAAAGCCGCAGAGGGCCACGAC GTGTCGATCCGTGCGCTCAGTGCCCACAAGGAACGCAGCGGGTCGAGCTTCGCCGACTTCCAGGCCAACGCCAAGGCGGT CACCGGCGCCCGCGACTGA
Upstream 100 bases:
>100_bases CAATTGTTCACCGACGTTGATTCTCCCGTAGTGAGAAGATAGTTTCCTGAGAGGGAGAACCTCGCCGGAGCACGCAGCCG CTCAACGGAAGGACGCAGCC
Downstream 100 bases:
>100_bases TCTGCGGGGACGTTCACCGGTGCGGCGGCGGCAGCTGATCGCGCCGGTGAACTGCTGTGCAACAGTCTTTTTCGAACACA GAGGAGAACCAAGTGTCGGG
Product: amidohydrolase 2
Products: NA
Alternate protein names: Amidase; Amidohydrolase Family Protein; Metal-Dependent Hydrolase; Barh Protein; TIM-Barrel Fold Metal-Dependent Hydrolase; Metal-Dependent Amidohydrolase; Amidohydrolase 2 Protein; 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase; Hydrolase; Aminocarboxymuconate-Semialdehyde Decarboxylase; Amidohydrolase Family; Minocarboxymuconate-Semialdehyde Decarboxylase.
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKYDDMILISVDDHIIEPPNMFKNHLPEKYINDAPRLVHNPDGSDTWQFRDTVIPNVALNAVAGRPKEEYGLEPQGLDEI RKGCYDPNERVKDMNAGGVLATMNFPSFPGFAARLFATEDPDFSLALVQAYNDWHIDEWCGSNPGRFIPMAIPAIWDPEL CAQEVRRVSKKGVHSLTFTENPSTLGYPSFHDLEHWRPLWEALVETETIMNVHIGSSGKLAITAPDAPMDVMITLQPMNI VQAAADLLWSAPIKEFPTLKIALSEGGTGWIPYFLDRVDRTYEMHSTWTHQNFGDKLPSEVFRDHFLTCFISDPVGVKNR HMIGIDNICWEMDYPHSDSMWPGAPEELGAVFDTYEVTDEEINKITHENAMRWYHFEPFKHIPKEQATVGALRKAAEGHD VSIRALSAHKERSGSSFADFQANAKAVTGARD
Sequences:
>Translated_432_residues MKYDDMILISVDDHIIEPPNMFKNHLPEKYINDAPRLVHNPDGSDTWQFRDTVIPNVALNAVAGRPKEEYGLEPQGLDEI RKGCYDPNERVKDMNAGGVLATMNFPSFPGFAARLFATEDPDFSLALVQAYNDWHIDEWCGSNPGRFIPMAIPAIWDPEL CAQEVRRVSKKGVHSLTFTENPSTLGYPSFHDLEHWRPLWEALVETETIMNVHIGSSGKLAITAPDAPMDVMITLQPMNI VQAAADLLWSAPIKEFPTLKIALSEGGTGWIPYFLDRVDRTYEMHSTWTHQNFGDKLPSEVFRDHFLTCFISDPVGVKNR HMIGIDNICWEMDYPHSDSMWPGAPEELGAVFDTYEVTDEEINKITHENAMRWYHFEPFKHIPKEQATVGALRKAAEGHD VSIRALSAHKERSGSSFADFQANAKAVTGARD >Mature_432_residues MKYDDMILISVDDHIIEPPNMFKNHLPEKYINDAPRLVHNPDGSDTWQFRDTVIPNVALNAVAGRPKEEYGLEPQGLDEI RKGCYDPNERVKDMNAGGVLATMNFPSFPGFAARLFATEDPDFSLALVQAYNDWHIDEWCGSNPGRFIPMAIPAIWDPEL CAQEVRRVSKKGVHSLTFTENPSTLGYPSFHDLEHWRPLWEALVETETIMNVHIGSSGKLAITAPDAPMDVMITLQPMNI VQAAADLLWSAPIKEFPTLKIALSEGGTGWIPYFLDRVDRTYEMHSTWTHQNFGDKLPSEVFRDHFLTCFISDPVGVKNR HMIGIDNICWEMDYPHSDSMWPGAPEELGAVFDTYEVTDEEINKITHENAMRWYHFEPFKHIPKEQATVGALRKAAEGHD VSIRALSAHKERSGSSFADFQANAKAVTGARD
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48780; Mature: 48780
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYDDMILISVDDHIIEPPNMFKNHLPEKYINDAPRLVHNPDGSDTWQFRDTVIPNVALN CCCCCEEEEEECCCCCCCCHHHHHCCCHHHHCCCCCEEECCCCCCCEEEHHHCCCCHHHH AVAGRPKEEYGLEPQGLDEIRKGCYDPNERVKDMNAGGVLATMNFPSFPGFAARLFATED HHCCCCHHHHCCCCCCHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCCCHHEEEEECCC PDFSLALVQAYNDWHIDEWCGSNPGRFIPMAIPAIWDPELCAQEVRRVSKKGVHSLTFTE CCCEEEEEEECCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEC NPSTLGYPSFHDLEHWRPLWEALVETETIMNVHIGSSGKLAITAPDAPMDVMITLQPMNI CCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCCEEEEEEECCHHH VQAAADLLWSAPIKEFPTLKIALSEGGTGWIPYFLDRVDRTYEMHSTWTHQNFGDKLPSE HHHHHHHHHHCCHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH VFRDHFLTCFISDPVGVKNRHMIGIDNICWEMDYPHSDSMWPGAPEELGAVFDTYEVTDE HHHHHEEEEEECCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHH EINKITHENAMRWYHFEPFKHIPKEQATVGALRKAAEGHDVSIRALSAHKERSGSSFADF HHHHHHHHCCEEEEEECHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCHHC QANAKAVTGARD CCCCEECCCCCC >Mature Secondary Structure MKYDDMILISVDDHIIEPPNMFKNHLPEKYINDAPRLVHNPDGSDTWQFRDTVIPNVALN CCCCCEEEEEECCCCCCCCHHHHHCCCHHHHCCCCCEEECCCCCCCEEEHHHCCCCHHHH AVAGRPKEEYGLEPQGLDEIRKGCYDPNERVKDMNAGGVLATMNFPSFPGFAARLFATED HHCCCCHHHHCCCCCCHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCCCHHEEEEECCC PDFSLALVQAYNDWHIDEWCGSNPGRFIPMAIPAIWDPELCAQEVRRVSKKGVHSLTFTE CCCEEEEEEECCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEC NPSTLGYPSFHDLEHWRPLWEALVETETIMNVHIGSSGKLAITAPDAPMDVMITLQPMNI CCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCCEEEEEEECCHHH VQAAADLLWSAPIKEFPTLKIALSEGGTGWIPYFLDRVDRTYEMHSTWTHQNFGDKLPSE HHHHHHHHHHCCHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH VFRDHFLTCFISDPVGVKNRHMIGIDNICWEMDYPHSDSMWPGAPEELGAVFDTYEVTDE HHHHHEEEEEECCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHH EINKITHENAMRWYHFEPFKHIPKEQATVGALRKAAEGHDVSIRALSAHKERSGSSFADF HHHHHHHHCCEEEEEECHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCHHC QANAKAVTGARD CCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA