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The map label for this gene is yeaW [H]

Identifier: 108800667

GI number: 108800667

Start: 3956820

End: 3958187

Strand: Reverse

Name: yeaW [H]

Synonym: Mmcs_3702

Alternate gene names: 108800667

Gene position: 3958187-3956820 (Counterclockwise)

Preceding gene: 108800669

Following gene: 108800666

Centisome position: 69.38

GC content: 63.89

Gene sequence:

>1368_bases
TTGTTGCCGGCAACTCGCCCAGGAGACTGGCTCGATCCCGCATCCGGTCTCGGCTCGAGTCTGGATGACGTGGAGCCCGG
GACGTTCAACACGACCATCCCCACCGACCGTTACACCTGTCGGGACTACGCGGCGCGCGAGCGGGATGCGATCTGGATGC
GCGTCTGGCAGATCGCGGGCCGCGTCGAGGACCTGCCGAAGCCCGGCGACTGGAAGAAGTACCAGATCCTCGATCAGTCC
TTCATCATCGTCCGTGGAAAGGACGGCACGCTCAGGGGTTTCGTCAACGCCTGCAGGCACCGCGGCAACGCGCTGTGCGT
CACCGAGACCGGCAACGCCAAGCGCGGATTCCTCTGCCAGTACCACCTCTGGTCCTATGACCTGGAGGGCAGGTTGAAAG
GAATGCTGCGCGAAGACCTCGCCGGGCCGATCGACAAGACCGAGAACTCTCTGCTCCCGGTTTCGGTCGACACCTTCGCC
GGCTTCCTCTTCCTCAATCCGGATCCCGATGCGGAACCACTGCGGGAGTACCTCGGCGAGGACGTCGTCACCCTGCTGGA
GCCGTACAACATCGAGCAGTTCACCACGGTCATGGACGTCACCGAGGCCATCGACTGCAACTGGAAAGTCGTGATGGACG
CCTTCGAAGAGGGCTACCACATCAACGGGATCCATCCCCAGTTGCTGCAGGTGCTGCACATCAATCCCAGGACCGCGCGC
TACCGGTTCTTCGAGAACCACAGCGTCGCGATGGCCCCCTTCGAAGTCGTCGGTGCCGGCGTGCAGGATCAGGTCGCAGG
GATCCTGGCGTTGCCCGAAACCTTCCCCGGCACCGTCGCGGTGATCCCGCGCTTCCAGGAACTGATTGCGCCCTACCAGG
ATTCGGACGGGAACGTGGACTTCCCGGAGGGCGTCACCGCGCGTCTCCTGCTGCAGCAGGCCACCCGTGAGGTGCTGACC
GGTATGGGGCTCGACGTCAGCGCCCTGACCGATGACCAGATGGTCGACAACCAGGGCTGGGTGCTGTTCCCGAACTACTT
CATGACGGTGCGCGCCGGCGAATGCCACGTCATCATGTCGGCGCCGCACCCCGACGGTGACCCGAACCGATGCATCTGGC
ACGTGGCCAGCTACATGTATGTGCCGCAGGAGTTCCGCGACGCCGTCCGGGCCGAGGCGATCGTGGTGGACACGCCGGGA
AGCCACAAGTACTTCGAGGCGCTTCAGCAGGACTACGAGCAGATGCCCCGGCAGCAGAAGGGCCTGCGCAACGACCGGCT
CGATCACATGTCGCTGGTCAAGGAAGAAGTCGTCATCGCCCACTACCACTCGGTCGTCGACCGCTACATGGAAAGCAGGA
CACGTTGA

Upstream 100 bases:

>100_bases
GTGAGGCTTCCTCGGGCAGCCCTCGCCCGGACGAAACCTCCACCGCCGGGAGCGTCCTCGACAAAGCCCTCGACAAAGCC
CTCGACAGAGGAGGACCACC

Downstream 100 bases:

>100_bases
ACCTCGAACAGCGCATCGCCCACCACGTCCGGATGGCCGAGGCGTATCGCGACGCCTATCTGCGCCAGGGTGTGAAGGAC
GGCGAAGCCTTCGCCGACGC

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MLPATRPGDWLDPASGLGSSLDDVEPGTFNTTIPTDRYTCRDYAARERDAIWMRVWQIAGRVEDLPKPGDWKKYQILDQS
FIIVRGKDGTLRGFVNACRHRGNALCVTETGNAKRGFLCQYHLWSYDLEGRLKGMLREDLAGPIDKTENSLLPVSVDTFA
GFLFLNPDPDAEPLREYLGEDVVTLLEPYNIEQFTTVMDVTEAIDCNWKVVMDAFEEGYHINGIHPQLLQVLHINPRTAR
YRFFENHSVAMAPFEVVGAGVQDQVAGILALPETFPGTVAVIPRFQELIAPYQDSDGNVDFPEGVTARLLLQQATREVLT
GMGLDVSALTDDQMVDNQGWVLFPNYFMTVRAGECHVIMSAPHPDGDPNRCIWHVASYMYVPQEFRDAVRAEAIVVDTPG
SHKYFEALQQDYEQMPRQQKGLRNDRLDHMSLVKEEVVIAHYHSVVDRYMESRTR

Sequences:

>Translated_455_residues
MLPATRPGDWLDPASGLGSSLDDVEPGTFNTTIPTDRYTCRDYAARERDAIWMRVWQIAGRVEDLPKPGDWKKYQILDQS
FIIVRGKDGTLRGFVNACRHRGNALCVTETGNAKRGFLCQYHLWSYDLEGRLKGMLREDLAGPIDKTENSLLPVSVDTFA
GFLFLNPDPDAEPLREYLGEDVVTLLEPYNIEQFTTVMDVTEAIDCNWKVVMDAFEEGYHINGIHPQLLQVLHINPRTAR
YRFFENHSVAMAPFEVVGAGVQDQVAGILALPETFPGTVAVIPRFQELIAPYQDSDGNVDFPEGVTARLLLQQATREVLT
GMGLDVSALTDDQMVDNQGWVLFPNYFMTVRAGECHVIMSAPHPDGDPNRCIWHVASYMYVPQEFRDAVRAEAIVVDTPG
SHKYFEALQQDYEQMPRQQKGLRNDRLDHMSLVKEEVVIAHYHSVVDRYMESRTR
>Mature_455_residues
MLPATRPGDWLDPASGLGSSLDDVEPGTFNTTIPTDRYTCRDYAARERDAIWMRVWQIAGRVEDLPKPGDWKKYQILDQS
FIIVRGKDGTLRGFVNACRHRGNALCVTETGNAKRGFLCQYHLWSYDLEGRLKGMLREDLAGPIDKTENSLLPVSVDTFA
GFLFLNPDPDAEPLREYLGEDVVTLLEPYNIEQFTTVMDVTEAIDCNWKVVMDAFEEGYHINGIHPQLLQVLHINPRTAR
YRFFENHSVAMAPFEVVGAGVQDQVAGILALPETFPGTVAVIPRFQELIAPYQDSDGNVDFPEGVTARLLLQQATREVLT
GMGLDVSALTDDQMVDNQGWVLFPNYFMTVRAGECHVIMSAPHPDGDPNRCIWHVASYMYVPQEFRDAVRAEAIVVDTPG
SHKYFEALQQDYEQMPRQQKGLRNDRLDHMSLVKEEVVIAHYHSVVDRYMESRTR

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=196, Percent_Identity=30.6122448979592, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1788888, Length=213, Percent_Identity=32.8638497652582, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 51531; Mature: 51531

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPATRPGDWLDPASGLGSSLDDVEPGTFNTTIPTDRYTCRDYAARERDAIWMRVWQIAG
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RVEDLPKPGDWKKYQILDQSFIIVRGKDGTLRGFVNACRHRGNALCVTETGNAKRGFLCQ
HHHCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCCEEEE
YHLWSYDLEGRLKGMLREDLAGPIDKTENSLLPVSVDTFAGFLFLNPDPDAEPLREYLGE
EEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHCCEEEECCCCCHHHHHHHHCC
DVVTLLEPYNIEQFTTVMDVTEAIDCNWKVVMDAFEEGYHINGIHPQLLQVLHINPRTAR
HHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCHHHHHHHCCCCCCEE
YRFFENHSVAMAPFEVVGAGVQDQVAGILALPETFPGTVAVIPRFQELIAPYQDSDGNVD
EEEECCCCEEECCHHHHCCCHHHHHHHEEECCCCCCCCEEEHHHHHHHHCCCCCCCCCCC
FPEGVTARLLLQQATREVLTGMGLDVSALTDDQMVDNQGWVLFPNYFMTVRAGECHVIMS
CCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCEECCCCCEEECCEEEEEECCCEEEEEE
APHPDGDPNRCIWHVASYMYVPQEFRDAVRAEAIVVDTPGSHKYFEALQQDYEQMPRQQK
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHCCHHHH
GLRNDRLDHMSLVKEEVVIAHYHSVVDRYMESRTR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLPATRPGDWLDPASGLGSSLDDVEPGTFNTTIPTDRYTCRDYAARERDAIWMRVWQIAG
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RVEDLPKPGDWKKYQILDQSFIIVRGKDGTLRGFVNACRHRGNALCVTETGNAKRGFLCQ
HHHCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCCEEEE
YHLWSYDLEGRLKGMLREDLAGPIDKTENSLLPVSVDTFAGFLFLNPDPDAEPLREYLGE
EEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHCCEEEECCCCCHHHHHHHHCC
DVVTLLEPYNIEQFTTVMDVTEAIDCNWKVVMDAFEEGYHINGIHPQLLQVLHINPRTAR
HHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCHHHHHHHCCCCCCEE
YRFFENHSVAMAPFEVVGAGVQDQVAGILALPETFPGTVAVIPRFQELIAPYQDSDGNVD
EEEECCCCEEECCHHHHCCCHHHHHHHEEECCCCCCCCEEEHHHHHHHHCCCCCCCCCCC
FPEGVTARLLLQQATREVLTGMGLDVSALTDDQMVDNQGWVLFPNYFMTVRAGECHVIMS
CCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCEECCCCCEEECCEEEEEECCCEEEEEE
APHPDGDPNRCIWHVASYMYVPQEFRDAVRAEAIVVDTPGSHKYFEALQQDYEQMPRQQK
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHCCHHHH
GLRNDRLDHMSLVKEEVVIAHYHSVVDRYMESRTR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]