Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

Click here to switch to the map view.

The map label for this gene is 108800654

Identifier: 108800654

GI number: 108800654

Start: 3945972

End: 3946433

Strand: Reverse

Name: 108800654

Synonym: Mmcs_3689

Alternate gene names: NA

Gene position: 3946433-3945972 (Counterclockwise)

Preceding gene: 108800665

Following gene: 108800649

Centisome position: 69.17

GC content: 72.51

Gene sequence:

>462_bases
GTGGTGCGGGTGGGGGTGGACCCGGCGGGCGAACTGACACCCGCGCAGCTAGCCGACGGCATGTCGCGCCTGCGCGAACT
CGGGGGCGCGGCGGGCGCGGACATCGTGGACAACAACCTGCCCGCCATGCCGCCGGGCCGGCGCGAAGCCGAGCTGCTGA
TCGCCGGCGACGACCCCGGCAGTCTCACCCAGACGGCGCTCGGTCTGTGCGCGGAGGCGTTCGGCACCGAACCGGTCGCC
GGTGTGCTCACCTACATCAGCCGCGGCACCGACGACGACGCGCACGGCGTGCTGGCCGGTTTCGGTCTGGCCGGTGACGT
CACCCGCACCGCGGACGATGCTGGGTGGGACGTCGTGCACGTGACGCTGCGCAAGGCCGACCTCGAGCGGATCCCGGAGA
GCCGCATCCACACCGCGCTGGAGGCCTCGCTCAACTGTGAGGTGCACATCCGGACCGTCTGA

Upstream 100 bases:

>100_bases
GGTGCCCGGCCAGACGGCGGTGGTGAGATCGGTTGCGGCGGTGGGGTTCATCTGCTTCTACTTTGTCCTCGCGGATAGGC
TGGCCGACATGAGAACTGCG

Downstream 100 bases:

>100_bases
CACGTTCACCGGCCCAGGAAGTCGAGGATGGCCGGGGCGGCCTGCACCCAGGTGTCGAACATGTTGAACCGCTTGACCTT
CCCGGATGCCCGCTTCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MVRVGVDPAGELTPAQLADGMSRLRELGGAAGADIVDNNLPAMPPGRREAELLIAGDDPGSLTQTALGLCAEAFGTEPVA
GVLTYISRGTDDDAHGVLAGFGLAGDVTRTADDAGWDVVHVTLRKADLERIPESRIHTALEASLNCEVHIRTV

Sequences:

>Translated_153_residues
MVRVGVDPAGELTPAQLADGMSRLRELGGAAGADIVDNNLPAMPPGRREAELLIAGDDPGSLTQTALGLCAEAFGTEPVA
GVLTYISRGTDDDAHGVLAGFGLAGDVTRTADDAGWDVVHVTLRKADLERIPESRIHTALEASLNCEVHIRTV
>Mature_153_residues
MVRVGVDPAGELTPAQLADGMSRLRELGGAAGADIVDNNLPAMPPGRREAELLIAGDDPGSLTQTALGLCAEAFGTEPVA
GVLTYISRGTDDDAHGVLAGFGLAGDVTRTADDAGWDVVHVTLRKADLERIPESRIHTALEASLNCEVHIRTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15893; Mature: 15893

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRVGVDPAGELTPAQLADGMSRLRELGGAAGADIVDNNLPAMPPGRREAELLIAGDDPG
CEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
SLTQTALGLCAEAFGTEPVAGVLTYISRGTDDDAHGVLAGFGLAGDVTRTADDAGWDVVH
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEE
VTLRKADLERIPESRIHTALEASLNCEVHIRTV
EEEEHHHHHHCCHHHHHHHHHHCCCCEEEEEEC
>Mature Secondary Structure
MVRVGVDPAGELTPAQLADGMSRLRELGGAAGADIVDNNLPAMPPGRREAELLIAGDDPG
CEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
SLTQTALGLCAEAFGTEPVAGVLTYISRGTDDDAHGVLAGFGLAGDVTRTADDAGWDVVH
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEE
VTLRKADLERIPESRIHTALEASLNCEVHIRTV
EEEEHHHHHHCCHHHHHHHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA