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The map label for this gene is yngJ [H]

Identifier: 108800649

GI number: 108800649

Start: 3941115

End: 3942113

Strand: Reverse

Name: yngJ [H]

Synonym: Mmcs_3684

Alternate gene names: 108800649

Gene position: 3942113-3941115 (Counterclockwise)

Preceding gene: 108800654

Following gene: 108800648

Centisome position: 69.09

GC content: 69.67

Gene sequence:

>999_bases
ATGCTACTCGAGTTCGATGCGGATCAGCGACTGTGGCAGGAGACCGTGCGTGACGCGGTCACCAAACAGTGCCCGGCCTC
GCTGGTCCGCGAAATCGCCGAGAACGGCGTCGATCCGACGCCGCTGTGGAAGAGCTACGTCGACGCGGGATGGACGGAGC
TGACCGATCCCGAGAACGCCGTCGAGCTGGCGATCGTGTGCGAGGAGATGGGGCGGGCCACCGATCCGACGCCGTTCCTG
TCGACGATGACGCAGTACGCGCCGCTGGCGGCGGACCGGTTCGATCCGCAGCAGGCGGGTGCGGCAGTCTACGACGGGAT
CAGCGCCGTGCGCGACACCGAAGGCTGGGTGCTCGACGGGGCCGCGCGCTACGTGCTCGACGGTGACCGCGCCGACCGTC
TCGCGGTGGTCACCGACGCCGGTGTCTTCGTCGTCGACGCCGCCGTCGCGATCCGACGCCGCAGCCCGGTCTTCGATCCG
GTGCTGCACGTCGCCGACGTCTCGTTCGACGCTGTCCGGGTGCCCGACACCGACCGGGTGCGCACCGACTCCGAACGGGC
GCGTCACCTCGCGCTGACCGGTATCGCGGTCACCACCGTCGGCGCCTGCCAGCGGATCCTCGACCTGGCCCTCGACCACG
TCAAACAACGCCAGCAGTTCGGGGTGCCCATCGGGTCGTTCCAAGCCGTCCAGCACAAGGCTGTCGACATGCACGTGGCC
GTCGAACGCGCTCGCGCCCTGGCGTACTTCGCCGCGCTGACCATCGCGGCCGACGACCCGCGGCGCCGGCTCGCCGCGTC
GATGGCCAAGGCGGCGGCGGGGGAGTGCCAGTCGCTGGTGTTCCGGCACGGCCTGCAGCTCTTCGGCGCGATGGGGTTCA
CCTGGGAGAACGATCTGCAGTTCGCGTTGAAGCGGGCCAAGGCCGGCGAACTGCTGCTGGGCGGTGCGGCCGAGCACCGT
GCGACGATCGCGGAGGAATTCCATGCAGCTGACTTTTGA

Upstream 100 bases:

>100_bases
GTGCGCTTAGGAAACTTGACGGTCGGAGAGGGAGAACGGGTGGACGGATAATGAGAATGCTATTCTCGCATGGTCGTGAC
ACCGCACCAGGAGGCGCCGG

Downstream 100 bases:

>100_bases
TTCCGACGTCGAGCAGTTCCGCGCCGAGTTCGCGGCCTTCCTCGACGAGAATCTGCCGCCCGAATCGGCCACGCTCGAAC
GGCCGCGGTCGGTCTCGCAC

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLLEFDADQRLWQETVRDAVTKQCPASLVREIAENGVDPTPLWKSYVDAGWTELTDPENAVELAIVCEEMGRATDPTPFL
STMTQYAPLAADRFDPQQAGAAVYDGISAVRDTEGWVLDGAARYVLDGDRADRLAVVTDAGVFVVDAAVAIRRRSPVFDP
VLHVADVSFDAVRVPDTDRVRTDSERARHLALTGIAVTTVGACQRILDLALDHVKQRQQFGVPIGSFQAVQHKAVDMHVA
VERARALAYFAALTIAADDPRRRLAASMAKAAAGECQSLVFRHGLQLFGAMGFTWENDLQFALKRAKAGELLLGGAAEHR
ATIAEEFHAADF

Sequences:

>Translated_332_residues
MLLEFDADQRLWQETVRDAVTKQCPASLVREIAENGVDPTPLWKSYVDAGWTELTDPENAVELAIVCEEMGRATDPTPFL
STMTQYAPLAADRFDPQQAGAAVYDGISAVRDTEGWVLDGAARYVLDGDRADRLAVVTDAGVFVVDAAVAIRRRSPVFDP
VLHVADVSFDAVRVPDTDRVRTDSERARHLALTGIAVTTVGACQRILDLALDHVKQRQQFGVPIGSFQAVQHKAVDMHVA
VERARALAYFAALTIAADDPRRRLAASMAKAAAGECQSLVFRHGLQLFGAMGFTWENDLQFALKRAKAGELLLGGAAEHR
ATIAEEFHAADF
>Mature_332_residues
MLLEFDADQRLWQETVRDAVTKQCPASLVREIAENGVDPTPLWKSYVDAGWTELTDPENAVELAIVCEEMGRATDPTPFL
STMTQYAPLAADRFDPQQAGAAVYDGISAVRDTEGWVLDGAARYVLDGDRADRLAVVTDAGVFVVDAAVAIRRRSPVFDP
VLHVADVSFDAVRVPDTDRVRTDSERARHLALTGIAVTTVGACQRILDLALDHVKQRQQFGVPIGSFQAVQHKAVDMHVA
VERARALAYFAALTIAADDPRRRLAASMAKAAAGECQSLVFRHGLQLFGAMGFTWENDLQFALKRAKAGELLLGGAAEHR
ATIAEEFHAADF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=168, Percent_Identity=29.7619047619048, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17533517, Length=172, Percent_Identity=29.0697674418605, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21356377, Length=131, Percent_Identity=35.8778625954198, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24660351, Length=269, Percent_Identity=26.7657992565056, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 36172; Mature: 36172

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLEFDADQRLWQETVRDAVTKQCPASLVREIAENGVDPTPLWKSYVDAGWTELTDPENA
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHH
VELAIVCEEMGRATDPTPFLSTMTQYAPLAADRFDPQQAGAAVYDGISAVRDTEGWVLDG
HHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHCCCCHHHCCHHHHHHHHHHHCCCCEEECC
AARYVLDGDRADRLAVVTDAGVFVVDAAVAIRRRSPVFDPVLHVADVSFDAVRVPDTDRV
CCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCCC
RTDSERARHLALTGIAVTTVGACQRILDLALDHVKQRQQFGVPIGSFQAVQHKAVDMHVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VERARALAYFAALTIAADDPRRRLAASMAKAAAGECQSLVFRHGLQLFGAMGFTWENDLQ
HHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
FALKRAKAGELLLGGAAEHRATIAEEFHAADF
HHHHHHCCCCEEECCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLLEFDADQRLWQETVRDAVTKQCPASLVREIAENGVDPTPLWKSYVDAGWTELTDPENA
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHH
VELAIVCEEMGRATDPTPFLSTMTQYAPLAADRFDPQQAGAAVYDGISAVRDTEGWVLDG
HHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHCCCCHHHCCHHHHHHHHHHHCCCCEEECC
AARYVLDGDRADRLAVVTDAGVFVVDAAVAIRRRSPVFDPVLHVADVSFDAVRVPDTDRV
CCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCCC
RTDSERARHLALTGIAVTTVGACQRILDLALDHVKQRQQFGVPIGSFQAVQHKAVDMHVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VERARALAYFAALTIAADDPRRRLAASMAKAAAGECQSLVFRHGLQLFGAMGFTWENDLQ
HHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
FALKRAKAGELLLGGAAEHRATIAEEFHAADF
HHHHHHCCCCEEECCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]