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The map label for this gene is yngJ [H]

Identifier: 108800648

GI number: 108800648

Start: 3939956

End: 3941131

Strand: Reverse

Name: yngJ [H]

Synonym: Mmcs_3683

Alternate gene names: 108800648

Gene position: 3941131-3939956 (Counterclockwise)

Preceding gene: 108800649

Following gene: 108800641

Centisome position: 69.08

GC content: 67.43

Gene sequence:

>1176_bases
ATGCAGCTGACTTTTGATTCCGACGTCGAGCAGTTCCGCGCCGAGTTCGCGGCCTTCCTCGACGAGAATCTGCCGCCCGA
ATCGGCCACGCTCGAACGGCCGCGGTCGGTCTCGCACATGCCGCAGTGGGCGCGCGACTGGCAGCGGCTGCTGTTCGACA
ACGGCTGGCTGCTGCCCGCACAGCCGCCGGAGTTCGGCGGCCGCAACGCCTCCGTGCTCCAGCAGTTCGTCCACCTCGAC
GAACTGTGCCGGCGACGGATCTACCACAGCTTCAACCCGCAGGGCGTCAACATCGTCGCCGCCTCGCTGATCACCTTCGG
CAGCGACGAGCAGAAACACCGGTGGGCGGTGCCGGTGCTGCGCGGGGAACTCACCGCTTCGCTGGGCATGAGTGAACCCA
GCGCCGGATCGGATCTCGCGTCACTGCGGACACGCGCGGTGCAGGACGGCGATCACTTCGTGGTGAACGGGCAGAAGGTG
TGGACCTCCGGCGCCCACGACGCCGACTACCTGCTGGCGTTCGTGCGCACCGATCCGGATGCGCCCAAGCACCGGGGCAT
CAGTGCGCTGATCATCCCGACCGATACGCCGGGGGTGGTGTGCCGTCCCTTCGCCGATCTGTGCGGCGAGGAGAACAAGG
ACTTCAACGAGGTCTTCTTTACCGACGCCCGGGTGCCCGCCGAGAACCTCGTCGGCCCGCTGAACCAGGGCTGGAAGGTG
GCCAACGGTTCGCTGGGTCACGAGCGCACGATGATGTGGCTCGGTTTCGCCGACCGCATCGACAACGTGATCGCCGACTT
CCGGCCGACCACCGAAATCGAGCGCGACCAGTATGCGTCGATGATCATGGACTATCAGGCGCTGCGGGCGATGGGCTCGG
CCGCGCTGGCGCGCGCCGCCCGCGGGGAAATGGACACCGCATCGGTGTCGGTGCTCAAGCTGTTCGGCTCGGAGGCCGAG
ATGCGGGCCGCTGATGCGGCGCTGACGGCATCCGGGTCCGCCGGGCTGGTGCACCCCTCGACGACCGGGCGCTATGAGCA
CATGAACCTCGACCACTACTTCGCCAGCTGGTTCGAGCGCTACGCCCGCAGTTTCTCCGGCACCATCGCCGGCGGAACCT
CGGAGATCCAGCGCAACATCATCGCCACGCAGGTACTGGGGTTGCCGCGCGGCTGA

Upstream 100 bases:

>100_bases
TGGGAGAACGATCTGCAGTTCGCGTTGAAGCGGGCCAAGGCCGGCGAACTGCTGCTGGGCGGTGCGGCCGAGCACCGTGC
GACGATCGCGGAGGAATTCC

Downstream 100 bases:

>100_bases
GTTCAGCCGCGCGGCCACCGCGTCAGTAGTTGTTACAGGTGGCGGCGACGTTCGAGATCGGCCCGAAGTAGGCCTGTGCG
GTCGGGTTGCTCTGGAGGAA

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MQLTFDSDVEQFRAEFAAFLDENLPPESATLERPRSVSHMPQWARDWQRLLFDNGWLLPAQPPEFGGRNASVLQQFVHLD
ELCRRRIYHSFNPQGVNIVAASLITFGSDEQKHRWAVPVLRGELTASLGMSEPSAGSDLASLRTRAVQDGDHFVVNGQKV
WTSGAHDADYLLAFVRTDPDAPKHRGISALIIPTDTPGVVCRPFADLCGEENKDFNEVFFTDARVPAENLVGPLNQGWKV
ANGSLGHERTMMWLGFADRIDNVIADFRPTTEIERDQYASMIMDYQALRAMGSAALARAARGEMDTASVSVLKLFGSEAE
MRAADAALTASGSAGLVHPSTTGRYEHMNLDHYFASWFERYARSFSGTIAGGTSEIQRNIIATQVLGLPRG

Sequences:

>Translated_391_residues
MQLTFDSDVEQFRAEFAAFLDENLPPESATLERPRSVSHMPQWARDWQRLLFDNGWLLPAQPPEFGGRNASVLQQFVHLD
ELCRRRIYHSFNPQGVNIVAASLITFGSDEQKHRWAVPVLRGELTASLGMSEPSAGSDLASLRTRAVQDGDHFVVNGQKV
WTSGAHDADYLLAFVRTDPDAPKHRGISALIIPTDTPGVVCRPFADLCGEENKDFNEVFFTDARVPAENLVGPLNQGWKV
ANGSLGHERTMMWLGFADRIDNVIADFRPTTEIERDQYASMIMDYQALRAMGSAALARAARGEMDTASVSVLKLFGSEAE
MRAADAALTASGSAGLVHPSTTGRYEHMNLDHYFASWFERYARSFSGTIAGGTSEIQRNIIATQVLGLPRG
>Mature_391_residues
MQLTFDSDVEQFRAEFAAFLDENLPPESATLERPRSVSHMPQWARDWQRLLFDNGWLLPAQPPEFGGRNASVLQQFVHLD
ELCRRRIYHSFNPQGVNIVAASLITFGSDEQKHRWAVPVLRGELTASLGMSEPSAGSDLASLRTRAVQDGDHFVVNGQKV
WTSGAHDADYLLAFVRTDPDAPKHRGISALIIPTDTPGVVCRPFADLCGEENKDFNEVFFTDARVPAENLVGPLNQGWKV
ANGSLGHERTMMWLGFADRIDNVIADFRPTTEIERDQYASMIMDYQALRAMGSAALARAARGEMDTASVSVLKLFGSEAE
MRAADAALTASGSAGLVHPSTTGRYEHMNLDHYFASWFERYARSFSGTIAGGTSEIQRNIIATQVLGLPRG

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=389, Percent_Identity=25.9640102827763, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI226958414, Length=353, Percent_Identity=26.0623229461756, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI4501859, Length=390, Percent_Identity=28.2051282051282, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI48976061, Length=335, Percent_Identity=29.2537313432836, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI211971008, Length=335, Percent_Identity=29.2537313432836, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI4557231, Length=397, Percent_Identity=24.4332493702771, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI187960098, Length=397, Percent_Identity=24.4332493702771, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI4557233, Length=342, Percent_Identity=28.3625730994152, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI76496475, Length=257, Percent_Identity=29.1828793774319, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI4557235, Length=257, Percent_Identity=29.1828793774319, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI7656849, Length=304, Percent_Identity=27.3026315789474, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI38505218, Length=254, Percent_Identity=29.1338582677165, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI21361497, Length=306, Percent_Identity=27.4509803921569, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI4501857, Length=303, Percent_Identity=23.7623762376238, Blast_Score=86, Evalue=9e-17,
Organism=Escherichia coli, GI87081958, Length=404, Percent_Identity=24.2574257425743, Blast_Score=85, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17570075, Length=412, Percent_Identity=25.7281553398058, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17538396, Length=387, Percent_Identity=24.5478036175711, Blast_Score=121, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17534899, Length=349, Percent_Identity=27.7936962750716, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17569725, Length=407, Percent_Identity=25.5528255528256, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17506239, Length=341, Percent_Identity=26.9794721407625, Blast_Score=111, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=353, Percent_Identity=26.9121813031161, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI32563615, Length=246, Percent_Identity=27.6422764227642, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17551932, Length=148, Percent_Identity=33.1081081081081, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17505929, Length=253, Percent_Identity=25.6916996047431, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI71982178, Length=253, Percent_Identity=28.0632411067194, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17562446, Length=254, Percent_Identity=29.5275590551181, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=243, Percent_Identity=25.9259259259259, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71985184, Length=148, Percent_Identity=34.4594594594595, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71985192, Length=148, Percent_Identity=34.4594594594595, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17533517, Length=268, Percent_Identity=27.2388059701493, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17531909, Length=243, Percent_Identity=27.1604938271605, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355753, Length=402, Percent_Identity=26.865671641791, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24666513, Length=389, Percent_Identity=27.5064267352185, Blast_Score=121, Evalue=8e-28,
Organism=Drosophila melanogaster, GI21356377, Length=359, Percent_Identity=29.2479108635098, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24660351, Length=367, Percent_Identity=26.158038147139, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI281363737, Length=254, Percent_Identity=26.3779527559055, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24646207, Length=342, Percent_Identity=27.1929824561404, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43190; Mature: 43190

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTFDSDVEQFRAEFAAFLDENLPPESATLERPRSVSHMPQWARDWQRLLFDNGWLLPA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHCCHHHHHHHHHHHHCCCEECCC
QPPEFGGRNASVLQQFVHLDELCRRRIYHSFNPQGVNIVAASLITFGSDEQKHRWAVPVL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEECHHH
RGELTASLGMSEPSAGSDLASLRTRAVQDGDHFVVNGQKVWTSGAHDADYLLAFVRTDPD
HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCCCCCHHHEEEEEECCCC
APKHRGISALIIPTDTPGVVCRPFADLCGEENKDFNEVFFTDARVPAENLVGPLNQGWKV
CCHHCCCEEEEEECCCCCCEECCHHHHCCCCCCCHHHEEEECCCCCHHHHCCCCCCCCEE
ANGSLGHERTMMWLGFADRIDNVIADFRPTTEIERDQYASMIMDYQALRAMGSAALARAA
CCCCCCCCHHEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGEMDTASVSVLKLFGSEAEMRAADAALTASGSAGLVHPSTTGRYEHMNLDHYFASWFER
CCCCCHHHHHHHHHHCCCHHHHHHHHHEECCCCCCEECCCCCCCEEECCHHHHHHHHHHH
YARSFSGTIAGGTSEIQRNIIATQVLGLPRG
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQLTFDSDVEQFRAEFAAFLDENLPPESATLERPRSVSHMPQWARDWQRLLFDNGWLLPA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHCCHHHHHHHHHHHHCCCEECCC
QPPEFGGRNASVLQQFVHLDELCRRRIYHSFNPQGVNIVAASLITFGSDEQKHRWAVPVL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEECHHH
RGELTASLGMSEPSAGSDLASLRTRAVQDGDHFVVNGQKVWTSGAHDADYLLAFVRTDPD
HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCCCCCHHHEEEEEECCCC
APKHRGISALIIPTDTPGVVCRPFADLCGEENKDFNEVFFTDARVPAENLVGPLNQGWKV
CCHHCCCEEEEEECCCCCCEECCHHHHCCCCCCCHHHEEEECCCCCHHHHCCCCCCCCEE
ANGSLGHERTMMWLGFADRIDNVIADFRPTTEIERDQYASMIMDYQALRAMGSAALARAA
CCCCCCCCHHEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGEMDTASVSVLKLFGSEAEMRAADAALTASGSAGLVHPSTTGRYEHMNLDHYFASWFER
CCCCCHHHHHHHHHHCCCHHHHHHHHHEECCCCCCEECCCCCCCEEECCHHHHHHHHHHH
YARSFSGTIAGGTSEIQRNIIATQVLGLPRG
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]