| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800637
Identifier: 108800637
GI number: 108800637
Start: 3929410
End: 3930606
Strand: Reverse
Name: 108800637
Synonym: Mmcs_3671
Alternate gene names: NA
Gene position: 3930606-3929410 (Counterclockwise)
Preceding gene: 108800638
Following gene: 108800636
Centisome position: 68.89
GC content: 63.49
Gene sequence:
>1197_bases GTGAAAGGGAGCGCAGTACGTCCGCTGACAGGGCTGGCCTTGCTCGTGGCCATCGGCCTGATCATCGCGCTGGCCATCGG TCTGTTCGCGGGAACATTCACCCGAACCGTTCCCGTAACGGTCGTGTCCGACCGGGCCGGCCTCGTGATGAACCCCGATG CCGAGGTCAAGATGCGCGGCGTCGAAGTCGGGCGGGTCGAGACGATCGAGCGGCGGCCCGACGGCAAGGCGGTTCTCCAT CTGGCGATGAATCCGTCACAGCTCCACCTCATTCCGTCCAACGTGAACGTCGACATCGCCTCGACGACTGTCTTCGGGGC CAAGTTCGTGCGGTTCTTCCCGCCGGAGGACCCCTCTCCGGAGAAGTTGCGGAAGGGGCAGGTGATCGAAGGCCAGCATG TCACCGTCGAGGTCAATACGGTGTTCCAGCAGCTCGTGGAGGTGCTGGACAAGATCGATCCCGCGAAGCTCAACGAGACG CTGGGTGCGATCTCGTCGGCATTCAACGGCCGCGGCGAGAAGTTCGGTCAGACGCTGGTCGATCTGAATGCGGTGCTCGC CAAGATCGAACCGAGCCTGCCGAATCTGGCCCAAGACATCGAGGCCTCCGTGCCCACGCTGACGGCCTACGGAGACGCGG CGCCGGACCTGATCTCTGCGGTGCAGAACACGACACAGTTCAGCAACACGATCGTCGACCAGCAGCAGAACCTCGACGAG TTCCTGGTCAGCGCAATCGGTCTGGCCGACATCGGCAACGAGGTGATCGGTGGCAACCGCGAGGCCCTCGGTGACGTCCT GGAGAATCTCGTGCCCACCGCCGAGTTGCTCAACACCTACAAAAAGTCGTTGTGGTGCGGCATCGGCGGCCTCATCCCGT TCGCGAAATCAGGACCGCAGTACTCGGGCATCATGGTCTCGGCCGGCCTGACACTGGGCGTCGAGCGGTACCGGTATCCC GGTGACCTGCCGAAGGTCGCGGCCAAGAGCGGGGGGCGTGACTATTGCAAGGAACTCGGACTGCCCGAACTACCCCCTGA GTTCGTGCCGCCGATGGTCGTCGGCGACGTCGGCTCCAATCCGGCGCAATATGGCAACGCGGGAATCCTGCTGAACTCCG AGGGACTCAAGAACTGGCTCTTCGGACCACTCGACGGGCCGCCTCGAAACACCGCACAGATTGGAATGCCGGGATGA
Upstream 100 bases:
>100_bases CGCACGTCATTGATCCTGGTCGTGTCGGTCACCCTGCTGGTCTCCCTGTCCGTCTACGGCCGCAACGGCAACTTCAACCT GTCGGGATAGGGGAGCAACG
Downstream 100 bases:
>100_bases CGCGATCGACTGGCACGCTGATCAAGTTCCTCATCTTCGGCGTCATCATGGTGGTGCTGACCGCCTTCCTGTTCTTGGTG TTCAGTGACTCGAGGACCGG
Product: virulence factor MCE-like protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family A; Virulence Factor; Mce Family A; MCE-Family Protein; MCE-Family F; Mammalian Cell Entry Related Domain-Containing Protein; MCE Family Protein; Cell Invasion Protein; Virulence Factor MCE-Like Protein; Mce-Related Protein; MCE-Family; Mce-Family F
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MKGSAVRPLTGLALLVAIGLIIALAIGLFAGTFTRTVPVTVVSDRAGLVMNPDAEVKMRGVEVGRVETIERRPDGKAVLH LAMNPSQLHLIPSNVNVDIASTTVFGAKFVRFFPPEDPSPEKLRKGQVIEGQHVTVEVNTVFQQLVEVLDKIDPAKLNET LGAISSAFNGRGEKFGQTLVDLNAVLAKIEPSLPNLAQDIEASVPTLTAYGDAAPDLISAVQNTTQFSNTIVDQQQNLDE FLVSAIGLADIGNEVIGGNREALGDVLENLVPTAELLNTYKKSLWCGIGGLIPFAKSGPQYSGIMVSAGLTLGVERYRYP GDLPKVAAKSGGRDYCKELGLPELPPEFVPPMVVGDVGSNPAQYGNAGILLNSEGLKNWLFGPLDGPPRNTAQIGMPG
Sequences:
>Translated_398_residues MKGSAVRPLTGLALLVAIGLIIALAIGLFAGTFTRTVPVTVVSDRAGLVMNPDAEVKMRGVEVGRVETIERRPDGKAVLH LAMNPSQLHLIPSNVNVDIASTTVFGAKFVRFFPPEDPSPEKLRKGQVIEGQHVTVEVNTVFQQLVEVLDKIDPAKLNET LGAISSAFNGRGEKFGQTLVDLNAVLAKIEPSLPNLAQDIEASVPTLTAYGDAAPDLISAVQNTTQFSNTIVDQQQNLDE FLVSAIGLADIGNEVIGGNREALGDVLENLVPTAELLNTYKKSLWCGIGGLIPFAKSGPQYSGIMVSAGLTLGVERYRYP GDLPKVAAKSGGRDYCKELGLPELPPEFVPPMVVGDVGSNPAQYGNAGILLNSEGLKNWLFGPLDGPPRNTAQIGMPG >Mature_398_residues MKGSAVRPLTGLALLVAIGLIIALAIGLFAGTFTRTVPVTVVSDRAGLVMNPDAEVKMRGVEVGRVETIERRPDGKAVLH LAMNPSQLHLIPSNVNVDIASTTVFGAKFVRFFPPEDPSPEKLRKGQVIEGQHVTVEVNTVFQQLVEVLDKIDPAKLNET LGAISSAFNGRGEKFGQTLVDLNAVLAKIEPSLPNLAQDIEASVPTLTAYGDAAPDLISAVQNTTQFSNTIVDQQQNLDE FLVSAIGLADIGNEVIGGNREALGDVLENLVPTAELLNTYKKSLWCGIGGLIPFAKSGPQYSGIMVSAGLTLGVERYRYP GDLPKVAAKSGGRDYCKELGLPELPPEFVPPMVVGDVGSNPAQYGNAGILLNSEGLKNWLFGPLDGPPRNTAQIGMPG
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42165; Mature: 42165
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGSAVRPLTGLALLVAIGLIIALAIGLFAGTFTRTVPVTVVSDRAGLVMNPDAEVKMRG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEECCCCCEEEEC VEVGRVETIERRPDGKAVLHLAMNPSQLHLIPSNVNVDIASTTVFGAKFVRFFPPEDPSP EECCCHHHHHCCCCCCEEEEEEECCCEEEEEECCCEEEEEHHHHHHHHHHEECCCCCCCH EKLRKGQVIEGQHVTVEVNTVFQQLVEVLDKIDPAKLNETLGAISSAFNGRGEKFGQTLV HHHHCCCEECCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH DLNAVLAKIEPSLPNLAQDIEASVPTLTAYGDAAPDLISAVQNTTQFSNTIVDQQQNLDE HHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH FLVSAIGLADIGNEVIGGNREALGDVLENLVPTAELLNTYKKSLWCGIGGLIPFAKSGPQ HHHHHHHHHHCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC YSGIMVSAGLTLGVERYRYPGDLPKVAAKSGGRDYCKELGLPELPPEFVPPMVVGDVGSN CCCEEEECCCHHHHHHHCCCCCCHHHHHCCCCHHHHHHCCCCCCCHHHCCCEEEECCCCC PAQYGNAGILLNSEGLKNWLFGPLDGPPRNTAQIGMPG CHHCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKGSAVRPLTGLALLVAIGLIIALAIGLFAGTFTRTVPVTVVSDRAGLVMNPDAEVKMRG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEECCCCCEEEEC VEVGRVETIERRPDGKAVLHLAMNPSQLHLIPSNVNVDIASTTVFGAKFVRFFPPEDPSP EECCCHHHHHCCCCCCEEEEEEECCCEEEEEECCCEEEEEHHHHHHHHHHEECCCCCCCH EKLRKGQVIEGQHVTVEVNTVFQQLVEVLDKIDPAKLNETLGAISSAFNGRGEKFGQTLV HHHHCCCEECCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH DLNAVLAKIEPSLPNLAQDIEASVPTLTAYGDAAPDLISAVQNTTQFSNTIVDQQQNLDE HHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH FLVSAIGLADIGNEVIGGNREALGDVLENLVPTAELLNTYKKSLWCGIGGLIPFAKSGPQ HHHHHHHHHHCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC YSGIMVSAGLTLGVERYRYPGDLPKVAAKSGGRDYCKELGLPELPPEFVPPMVVGDVGSN CCCEEEECCCHHHHHHHCCCCCCHHHHHCCCCHHHHHHCCCCCCCHHHCCCEEEECCCCC PAQYGNAGILLNSEGLKNWLFGPLDGPPRNTAQIGMPG CHHCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA