| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is yngI [H]
Identifier: 108800621
GI number: 108800621
Start: 3911840
End: 3913291
Strand: Reverse
Name: yngI [H]
Synonym: Mmcs_3655
Alternate gene names: 108800621
Gene position: 3913291-3911840 (Counterclockwise)
Preceding gene: 108800622
Following gene: 108800620
Centisome position: 68.59
GC content: 67.63
Gene sequence:
>1452_bases GTGACGTACGTTCCCAAGTGGTCGACCATCCCCGAGATGGTGCTGAGTGCAGCGGACCGCTTCGGCGACGCGGAAGCGGT CGTCGACGGTCCGCTGCGCTTGTCATTTGCGGAGGTCGTCCACAGAATTCGTTGTGCTGCAGGCGCATTCGCCGACCTGG GGATCGGGAAGGGTGACCGCGTCGCGATCTGGGCGCCCAATTCCGCCGAGTGGATCATCGCGGCGTTCGGCCTGCTGACC GCCGGCGGTGTGCTCGTACCCGTCAACACGCGGTTCAAGGGCGAGGAGGCCGCCGACGTCATCACGCGCAGCGGTGCCAG GGCGGTGCTGGTGCAGCAGGGCTTCCTCGGGGTCGAATACGCCGCCCCCGAAGGGGTTCCGGTGATCGACCTGAAGTCCG ACTTCCTGGCCGGTGGCGAGCCGTTCAGTCGCACCGTGGACAGCAGCGACATCTCCGACATCATCTTCACCTCGGGCACC ACCGGGCGTCCCAAGGGCGTGATGATGAACCACCGGCAGAACCTGCGGCTCTACGAGGAGTGGTGCAACCTCGCCGATCT GCGGCAGGGCGACCGCTACCTGATGGTCAACCCGTACTTCCACACCTTCGGCTACAAGGCCGGGCTGATCGCGTCGTTCA TCCGCGGGGCGACGATGGTGCCGGTACCGGTGTTCGACGTCGACCGTGTCGTGGACCTGATCGCCGCCGAACGCATCACC ATGCTGCCCGGACCGCCGACGCTGTATCACTCGCTTCTCTCCGTCGCGGACAAGTCGAAGCTCGCCACCTTGCGCGCCGG CGTCACCGGCGCGGCCGACATCCCGGTCGAACTGGTGCGGCGCGTGCTCGAGGAGCTGCCGTTCCAGACGCTGGCGACCG GCTACGGCCTCACCGAGGCGGGGACGGCCACGTTGTCGCGTCCGGGGGATTCGTTCGCCGACATCGCGACCACGGTCGGC ACCGCGTGCGACGGCGTCGAGGTCCGCATCGCCGACGACGGTGAGGTGCTGGTGCGCGGCTACAGCGTCATGCAGGGCTA CCTCGACGATCCGGCGGCGACCGCCGAAGCGATCGACCCCGACGGATGGCTGCACACCGGCGACCTCGGCACGCTCGACG ACGCCGGGCGCCTGCGCATCGTGGGCCGCAAGAAGGACATGTTCATCGTCGGCGGCTTCAACGCCTATCCGGCGGAGATC GAGGGCTTCCTGCTCGAGCACCCGGATGTCGCGCAGGCTGCGGTGATCGGCGTCCCCGACGAGCGGATGGGACAAGTGGG CAAGGCTTTCGTCGTGCGTCGGGATGGGCACGCCGGGCCGCTGTCGGCCGAGGGCCTCATCGCCTGGAGTCGTGAGCGAA TGGCCGGATTCAAGGTGCCGCGGTATGTAGAGTTCCTCGACGAACTGCCCCTCAACGCCACCGGCAAGGTGATGAAGGAC CAACTACGCTGA
Upstream 100 bases:
>100_bases GTCTGGCGGAGCCGACGCACTACGTGACCGCGCTCGAGCACCTGTCCGTCGAGGATCAGGCGAAGATCATGGGCGGCAAC CTGGGACGTCTCGTCACGAC
Downstream 100 bases:
>100_bases GCGCGCGCACAGCCCGTAAACGTCATTTCCGCAGGCAAAGTGCGACGGATCGGGTCCCGCAGATGCGGTATCGTCAGCCT CATACTCGAAAAATGAAAAC
Product: long-chain-fatty-acid--CoA ligase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MTYVPKWSTIPEMVLSAADRFGDAEAVVDGPLRLSFAEVVHRIRCAAGAFADLGIGKGDRVAIWAPNSAEWIIAAFGLLT AGGVLVPVNTRFKGEEAADVITRSGARAVLVQQGFLGVEYAAPEGVPVIDLKSDFLAGGEPFSRTVDSSDISDIIFTSGT TGRPKGVMMNHRQNLRLYEEWCNLADLRQGDRYLMVNPYFHTFGYKAGLIASFIRGATMVPVPVFDVDRVVDLIAAERIT MLPGPPTLYHSLLSVADKSKLATLRAGVTGAADIPVELVRRVLEELPFQTLATGYGLTEAGTATLSRPGDSFADIATTVG TACDGVEVRIADDGEVLVRGYSVMQGYLDDPAATAEAIDPDGWLHTGDLGTLDDAGRLRIVGRKKDMFIVGGFNAYPAEI EGFLLEHPDVAQAAVIGVPDERMGQVGKAFVVRRDGHAGPLSAEGLIAWSRERMAGFKVPRYVEFLDELPLNATGKVMKD QLR
Sequences:
>Translated_483_residues MTYVPKWSTIPEMVLSAADRFGDAEAVVDGPLRLSFAEVVHRIRCAAGAFADLGIGKGDRVAIWAPNSAEWIIAAFGLLT AGGVLVPVNTRFKGEEAADVITRSGARAVLVQQGFLGVEYAAPEGVPVIDLKSDFLAGGEPFSRTVDSSDISDIIFTSGT TGRPKGVMMNHRQNLRLYEEWCNLADLRQGDRYLMVNPYFHTFGYKAGLIASFIRGATMVPVPVFDVDRVVDLIAAERIT MLPGPPTLYHSLLSVADKSKLATLRAGVTGAADIPVELVRRVLEELPFQTLATGYGLTEAGTATLSRPGDSFADIATTVG TACDGVEVRIADDGEVLVRGYSVMQGYLDDPAATAEAIDPDGWLHTGDLGTLDDAGRLRIVGRKKDMFIVGGFNAYPAEI EGFLLEHPDVAQAAVIGVPDERMGQVGKAFVVRRDGHAGPLSAEGLIAWSRERMAGFKVPRYVEFLDELPLNATGKVMKD QLR >Mature_482_residues TYVPKWSTIPEMVLSAADRFGDAEAVVDGPLRLSFAEVVHRIRCAAGAFADLGIGKGDRVAIWAPNSAEWIIAAFGLLTA GGVLVPVNTRFKGEEAADVITRSGARAVLVQQGFLGVEYAAPEGVPVIDLKSDFLAGGEPFSRTVDSSDISDIIFTSGTT GRPKGVMMNHRQNLRLYEEWCNLADLRQGDRYLMVNPYFHTFGYKAGLIASFIRGATMVPVPVFDVDRVVDLIAAERITM LPGPPTLYHSLLSVADKSKLATLRAGVTGAADIPVELVRRVLEELPFQTLATGYGLTEAGTATLSRPGDSFADIATTVGT ACDGVEVRIADDGEVLVRGYSVMQGYLDDPAATAEAIDPDGWLHTGDLGTLDDAGRLRIVGRKKDMFIVGGFNAYPAEIE GFLLEHPDVAQAAVIGVPDERMGQVGKAFVVRRDGHAGPLSAEGLIAWSRERMAGFKVPRYVEFLDELPLNATGKVMKDQ LR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI156151445, Length=543, Percent_Identity=30.3867403314917, Blast_Score=259, Evalue=3e-69, Organism=Homo sapiens, GI187761345, Length=536, Percent_Identity=31.5298507462687, Blast_Score=195, Evalue=9e-50, Organism=Homo sapiens, GI187761343, Length=536, Percent_Identity=31.5298507462687, Blast_Score=195, Evalue=9e-50, Organism=Homo sapiens, GI122937307, Length=508, Percent_Identity=27.3622047244095, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI58082049, Length=502, Percent_Identity=28.2868525896414, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI157311624, Length=500, Percent_Identity=27.4, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI157311622, Length=500, Percent_Identity=27.4, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI115511026, Length=496, Percent_Identity=25.8064516129032, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI42544132, Length=501, Percent_Identity=25.748502994012, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI40807491, Length=516, Percent_Identity=27.5193798449612, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI38505220, Length=504, Percent_Identity=26.1904761904762, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI42794756, Length=487, Percent_Identity=26.2833675564682, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI42794760, Length=487, Percent_Identity=26.2833675564682, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI42794758, Length=487, Percent_Identity=26.2833675564682, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI57165412, Length=458, Percent_Identity=27.292576419214, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI57165410, Length=460, Percent_Identity=27.8260869565217, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI28416953, Length=517, Percent_Identity=23.9845261121857, Blast_Score=89, Evalue=9e-18, Organism=Homo sapiens, GI8923896, Length=535, Percent_Identity=23.9252336448598, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI253970489, Length=374, Percent_Identity=27.2727272727273, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI27477105, Length=140, Percent_Identity=37.8571428571429, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI83745141, Length=128, Percent_Identity=34.375, Blast_Score=73, Evalue=5e-13, Organism=Escherichia coli, GI145693145, Length=499, Percent_Identity=30.6613226452906, Blast_Score=222, Evalue=4e-59, Organism=Escherichia coli, GI1788107, Length=537, Percent_Identity=29.9813780260708, Blast_Score=220, Evalue=2e-58, Organism=Escherichia coli, GI221142682, Length=492, Percent_Identity=30.6910569105691, Blast_Score=188, Evalue=5e-49, Organism=Escherichia coli, GI1786810, Length=514, Percent_Identity=27.6264591439689, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1788595, Length=453, Percent_Identity=27.1523178807947, Blast_Score=119, Evalue=6e-28, Organism=Escherichia coli, GI1789201, Length=511, Percent_Identity=25.6360078277886, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1790505, Length=522, Percent_Identity=24.7126436781609, Blast_Score=82, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71994690, Length=557, Percent_Identity=30.8797127468582, Blast_Score=255, Evalue=3e-68, Organism=Caenorhabditis elegans, GI71994703, Length=557, Percent_Identity=30.8797127468582, Blast_Score=255, Evalue=4e-68, Organism=Caenorhabditis elegans, GI71994694, Length=557, Percent_Identity=30.8797127468582, Blast_Score=255, Evalue=4e-68, Organism=Caenorhabditis elegans, GI17560308, Length=538, Percent_Identity=30.2973977695167, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI32563687, Length=468, Percent_Identity=31.4102564102564, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI17558820, Length=494, Percent_Identity=30.9716599190283, Blast_Score=185, Evalue=4e-47, Organism=Caenorhabditis elegans, GI17559526, Length=545, Percent_Identity=27.8899082568807, Blast_Score=161, Evalue=9e-40, Organism=Caenorhabditis elegans, GI17538037, Length=517, Percent_Identity=27.2727272727273, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17557194, Length=519, Percent_Identity=27.1676300578035, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI71996755, Length=504, Percent_Identity=25.1984126984127, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI17531443, Length=493, Percent_Identity=25.5578093306288, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17560140, Length=511, Percent_Identity=24.4618395303327, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI71985884, Length=352, Percent_Identity=26.4204545454545, Blast_Score=112, Evalue=6e-25, Organism=Caenorhabditis elegans, GI25141359, Length=443, Percent_Identity=25.7336343115124, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17556552, Length=454, Percent_Identity=25.9911894273128, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17564090, Length=338, Percent_Identity=29.2899408284024, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17510401, Length=167, Percent_Identity=33.5329341317365, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71983001, Length=515, Percent_Identity=26.2135922330097, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71982997, Length=515, Percent_Identity=26.2135922330097, Blast_Score=68, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6319699, Length=474, Percent_Identity=26.5822784810127, Blast_Score=147, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6323182, Length=535, Percent_Identity=23.3644859813084, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6319264, Length=537, Percent_Identity=23.6499068901304, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320852, Length=338, Percent_Identity=26.3313609467456, Blast_Score=70, Evalue=7e-13, Organism=Drosophila melanogaster, GI24581924, Length=533, Percent_Identity=33.0206378986867, Blast_Score=255, Evalue=6e-68, Organism=Drosophila melanogaster, GI18859661, Length=491, Percent_Identity=30.7535641547862, Blast_Score=182, Evalue=6e-46, Organism=Drosophila melanogaster, GI21355181, Length=514, Percent_Identity=28.2101167315175, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI21356947, Length=375, Percent_Identity=30.9333333333333, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI24656500, Length=517, Percent_Identity=25.7253384912959, Blast_Score=122, Evalue=6e-28, Organism=Drosophila melanogaster, GI19922652, Length=479, Percent_Identity=25.8872651356994, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI19921316, Length=555, Percent_Identity=27.9279279279279, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24653035, Length=345, Percent_Identity=28.4057971014493, Blast_Score=118, Evalue=7e-27, Organism=Drosophila melanogaster, GI24648260, Length=352, Percent_Identity=29.2613636363636, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI20130357, Length=358, Percent_Identity=27.0949720670391, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI281365686, Length=329, Percent_Identity=26.7477203647416, Blast_Score=108, Evalue=7e-24, Organism=Drosophila melanogaster, GI24648257, Length=375, Percent_Identity=27.7333333333333, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI161076582, Length=348, Percent_Identity=26.4367816091954, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI21356441, Length=318, Percent_Identity=28.9308176100629, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24648255, Length=349, Percent_Identity=25.5014326647564, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI21358303, Length=326, Percent_Identity=25.7668711656442, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24648253, Length=349, Percent_Identity=25.214899713467, Blast_Score=104, Evalue=2e-22, Organism=Drosophila melanogaster, GI24666501, Length=477, Percent_Identity=24.3186582809224, Blast_Score=96, Evalue=7e-20, Organism=Drosophila melanogaster, GI24666497, Length=477, Percent_Identity=24.3186582809224, Blast_Score=96, Evalue=7e-20, Organism=Drosophila melanogaster, GI281366413, Length=477, Percent_Identity=24.3186582809224, Blast_Score=95, Evalue=9e-20, Organism=Drosophila melanogaster, GI62472339, Length=525, Percent_Identity=24.1904761904762, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24667955, Length=526, Percent_Identity=24.7148288973384, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24667959, Length=371, Percent_Identity=25.6064690026954, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI17933690, Length=132, Percent_Identity=35.6060606060606, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: NA
Molecular weight: Translated: 51913; Mature: 51782
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYVPKWSTIPEMVLSAADRFGDAEAVVDGPLRLSFAEVVHRIRCAAGAFADLGIGKGDR CCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCEEHHHHHHHHHHHHHCCHHHCCCCCCCE VAIWAPNSAEWIIAAFGLLTAGGVLVPVNTRFKGEEAADVITRSGARAVLVQQGFLGVEY EEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCEEEE AAPEGVPVIDLKSDFLAGGEPFSRTVDSSDISDIIFTSGTTGRPKGVMMNHRQNLRLYEE CCCCCCEEEEECHHHCCCCCCHHCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCHHHHH WCNLADLRQGDRYLMVNPYFHTFGYKAGLIASFIRGATMVPVPVFDVDRVVDLIAAERIT HCCHHHHCCCCEEEEECCCHHHHCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHCCEE MLPGPPTLYHSLLSVADKSKLATLRAGVTGAADIPVELVRRVLEELPFQTLATGYGLTEA ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCC GTATLSRPGDSFADIATTVGTACDGVEVRIADDGEVLVRGYSVMQGYLDDPAATAEAIDP CCEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHHHCCCCCCHHCCCCC DGWLHTGDLGTLDDAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLEHPDVAQAAVIGVPD CCCEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCEEEECCCCCHHEEEECCCH ERMGQVGKAFVVRRDGHAGPLSAEGLIAWSRERMAGFKVPRYVEFLDELPLNATGKVMKD HHHHCCCCEEEEEECCCCCCCCCCCEEEECHHHHHCCCCHHHHHHHHHCCCCCCCHHHHH QLR HCC >Mature Secondary Structure TYVPKWSTIPEMVLSAADRFGDAEAVVDGPLRLSFAEVVHRIRCAAGAFADLGIGKGDR CCCCCCCHHHHHHHHHHHHCCCCCEEECCCCEEHHHHHHHHHHHHHCCHHHCCCCCCCE VAIWAPNSAEWIIAAFGLLTAGGVLVPVNTRFKGEEAADVITRSGARAVLVQQGFLGVEY EEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCEEEE AAPEGVPVIDLKSDFLAGGEPFSRTVDSSDISDIIFTSGTTGRPKGVMMNHRQNLRLYEE CCCCCCEEEEECHHHCCCCCCHHCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCHHHHH WCNLADLRQGDRYLMVNPYFHTFGYKAGLIASFIRGATMVPVPVFDVDRVVDLIAAERIT HCCHHHHCCCCEEEEECCCHHHHCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHCCEE MLPGPPTLYHSLLSVADKSKLATLRAGVTGAADIPVELVRRVLEELPFQTLATGYGLTEA ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCC GTATLSRPGDSFADIATTVGTACDGVEVRIADDGEVLVRGYSVMQGYLDDPAATAEAIDP CCEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHHHCCCCCCHHCCCCC DGWLHTGDLGTLDDAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLEHPDVAQAAVIGVPD CCCEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCEEEECCCCCHHEEEECCCH ERMGQVGKAFVVRRDGHAGPLSAEGLIAWSRERMAGFKVPRYVEFLDELPLNATGKVMKD HHHHCCCCEEEEEECCCCCCCCCCCEEEECHHHHHCCCCHHHHHHHHHCCCCCCCHHHHH QLR HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387222; 9384377 [H]