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The map label for this gene is yngJ [H]

Identifier: 108800595

GI number: 108800595

Start: 3873492

End: 3874652

Strand: Reverse

Name: yngJ [H]

Synonym: Mmcs_3629

Alternate gene names: 108800595

Gene position: 3874652-3873492 (Counterclockwise)

Preceding gene: 108800596

Following gene: 108800594

Centisome position: 67.91

GC content: 67.44

Gene sequence:

>1161_bases
ATGACCGACTTTCTGGCGTCCGGCACGCTGCCGGACCACTACGAACAACTCGCCAAGACCGTGCGCGACTTCGCCCGCAG
CGTCGTGGCGCCGGTGGCCGCCAAACACGATGCGGAGCATTCGTTCCCGTACGAGGTCGTGCGCGGGATGGCCGATATGG
GCCTGTTCGGACTGCCGTTCCCCGAGGAGTACGGCGGGATGGGCGGGGATTACTTCGCCCTGTGCCTGGCGCTCGAGGAA
CTCGGCAAGGTCGACCAGAGCGTGGCGATCACGCTGGAGGCCGGCGTATCGCTGGGGGCGATGCCGGTGTACCGGTTCGG
CAACGAGGACCAGAAGCGGGAGTGGTTGCCGCAGTTGACCAGTGGGCAGGCGCTCGCCGCGTTCGGGCTGACCGAACCCG
GTGGCGGCAGCGATGCCGGCGCCCCCAAGACCACCGCCCGCCTCGACGATGGGCACTGGGTCATCAATGGTAGCAAGCAG
TTCATCACGAACTCGGGTACCGACATCACCAAGCTGGTGACCGTCACCGCCGTCACGGGTGAGGTCGACGGGCGCAAGGA
GATCTCGTCGATCCTCGTCCCCGTGCCCACCCAGGGGTTCACCGCCGAACCGGCCTACAACAAGGTGGGCTGGAACGCCT
CGGACACCCATCCGCTGTCGTTCGACGACGTTCGGGTACCCGAGGAGAACCTGCTCGGTGAGCGGGGCCGCGGGTACGCC
AACTTCCTGCGCATCCTCGACGAGGGCCGCATCGCGATCGCCGCGCTGTCGGTCGGCGCGGCGCAGGGTTGTGTCGACGA
GAGTGTCCGCTACGCCAAGGAGCGGGAAGCGTTCGGCCGCACCATCGGCAGCAACCAGGCCATCGCGTTCAAGATCGCCC
GGATGGAGGCCCGCGCGCACACCGCCCGCGCCGCCTACTACGACGCCGCGGCGTTGATGCTGTCGGGTAAACCGTTCAAG
AAGCAGGCCGCGATCGCCAAGCTGGTGGCCAGCGAGGCCGCGATGGACAACGCGCGCGACGCCACCCAGATCTTCGGCGG
CTACGGGTTCATGAACGAGTACCCGGTCGCCCGGCACTACCGCGACAGCAAGATCCTCGAGATCGGTGAGGGCACAACGG
AAGTGCAGCTGATGCTGATCGGGCGGGAGCTCGGCCTGTGA

Upstream 100 bases:

>100_bases
CCGTCGACGGCGTGGTCGAACTGCTCGTCGCGGTCGGCGACCAGGTCAAAGTGGGCCAGCCGCTGGCACGGATCCTCGCT
ACCGACAAAGGAGACCAGTC

Downstream 100 bases:

>100_bases
AGCGCGTCGTCACGCAGCGCGGGCTGTGGTTCGAGGAGTTCGAGACCGGCGTGGTCTACCAGCACCGGCCGGGGCGCACC
ATCACCGAGGCCGACAACGT

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MTDFLASGTLPDHYEQLAKTVRDFARSVVAPVAAKHDAEHSFPYEVVRGMADMGLFGLPFPEEYGGMGGDYFALCLALEE
LGKVDQSVAITLEAGVSLGAMPVYRFGNEDQKREWLPQLTSGQALAAFGLTEPGGGSDAGAPKTTARLDDGHWVINGSKQ
FITNSGTDITKLVTVTAVTGEVDGRKEISSILVPVPTQGFTAEPAYNKVGWNASDTHPLSFDDVRVPEENLLGERGRGYA
NFLRILDEGRIAIAALSVGAAQGCVDESVRYAKEREAFGRTIGSNQAIAFKIARMEARAHTARAAYYDAAALMLSGKPFK
KQAAIAKLVASEAAMDNARDATQIFGGYGFMNEYPVARHYRDSKILEIGEGTTEVQLMLIGRELGL

Sequences:

>Translated_386_residues
MTDFLASGTLPDHYEQLAKTVRDFARSVVAPVAAKHDAEHSFPYEVVRGMADMGLFGLPFPEEYGGMGGDYFALCLALEE
LGKVDQSVAITLEAGVSLGAMPVYRFGNEDQKREWLPQLTSGQALAAFGLTEPGGGSDAGAPKTTARLDDGHWVINGSKQ
FITNSGTDITKLVTVTAVTGEVDGRKEISSILVPVPTQGFTAEPAYNKVGWNASDTHPLSFDDVRVPEENLLGERGRGYA
NFLRILDEGRIAIAALSVGAAQGCVDESVRYAKEREAFGRTIGSNQAIAFKIARMEARAHTARAAYYDAAALMLSGKPFK
KQAAIAKLVASEAAMDNARDATQIFGGYGFMNEYPVARHYRDSKILEIGEGTTEVQLMLIGRELGL
>Mature_385_residues
TDFLASGTLPDHYEQLAKTVRDFARSVVAPVAAKHDAEHSFPYEVVRGMADMGLFGLPFPEEYGGMGGDYFALCLALEEL
GKVDQSVAITLEAGVSLGAMPVYRFGNEDQKREWLPQLTSGQALAAFGLTEPGGGSDAGAPKTTARLDDGHWVINGSKQF
ITNSGTDITKLVTVTAVTGEVDGRKEISSILVPVPTQGFTAEPAYNKVGWNASDTHPLSFDDVRVPEENLLGERGRGYAN
FLRILDEGRIAIAALSVGAAQGCVDESVRYAKEREAFGRTIGSNQAIAFKIARMEARAHTARAAYYDAAALMLSGKPFKK
QAAIAKLVASEAAMDNARDATQIFGGYGFMNEYPVARHYRDSKILEIGEGTTEVQLMLIGRELGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=375, Percent_Identity=42.6666666666667, Blast_Score=299, Evalue=3e-81,
Organism=Homo sapiens, GI4501859, Length=376, Percent_Identity=38.031914893617, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI187960098, Length=373, Percent_Identity=36.4611260053619, Blast_Score=228, Evalue=6e-60,
Organism=Homo sapiens, GI4557231, Length=373, Percent_Identity=36.4611260053619, Blast_Score=228, Evalue=8e-60,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=32.2666666666667, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI4501857, Length=377, Percent_Identity=32.3607427055703, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI21361497, Length=354, Percent_Identity=35.3107344632768, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI7656849, Length=378, Percent_Identity=34.1269841269841, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI76496475, Length=372, Percent_Identity=36.5591397849462, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI4557235, Length=372, Percent_Identity=36.5591397849462, Blast_Score=199, Evalue=3e-51,
Organism=Homo sapiens, GI226958414, Length=338, Percent_Identity=32.8402366863905, Blast_Score=199, Evalue=3e-51,
Organism=Homo sapiens, GI4503943, Length=368, Percent_Identity=29.6195652173913, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI7669494, Length=343, Percent_Identity=30.3206997084548, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI38505218, Length=337, Percent_Identity=29.9703264094956, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI48976061, Length=280, Percent_Identity=30.7142857142857, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI211971008, Length=280, Percent_Identity=30.7142857142857, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI87081958, Length=349, Percent_Identity=33.2378223495702, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI1786223, Length=375, Percent_Identity=27.7333333333333, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI87081702, Length=369, Percent_Identity=26.5582655826558, Blast_Score=87, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17508101, Length=382, Percent_Identity=37.696335078534, Blast_Score=255, Evalue=2e-68,
Organism=Caenorhabditis elegans, GI17506239, Length=366, Percent_Identity=37.7049180327869, Blast_Score=247, Evalue=8e-66,
Organism=Caenorhabditis elegans, GI17534899, Length=378, Percent_Identity=37.8306878306878, Blast_Score=227, Evalue=7e-60,
Organism=Caenorhabditis elegans, GI17570075, Length=366, Percent_Identity=34.1530054644809, Blast_Score=221, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17569725, Length=378, Percent_Identity=35.978835978836, Blast_Score=220, Evalue=8e-58,
Organism=Caenorhabditis elegans, GI17538396, Length=379, Percent_Identity=34.5646437994723, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17533517, Length=373, Percent_Identity=32.7077747989276, Blast_Score=201, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI71990804, Length=286, Percent_Identity=40.2097902097902, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI71985184, Length=352, Percent_Identity=33.5227272727273, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17505929, Length=369, Percent_Identity=29.2682926829268, Blast_Score=175, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17534353, Length=383, Percent_Identity=29.7650130548303, Blast_Score=172, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17551932, Length=369, Percent_Identity=29.5392953929539, Blast_Score=172, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI32563615, Length=232, Percent_Identity=39.2241379310345, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI71982178, Length=270, Percent_Identity=32.962962962963, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI71985192, Length=302, Percent_Identity=31.7880794701987, Blast_Score=151, Evalue=7e-37,
Organism=Caenorhabditis elegans, GI17531909, Length=240, Percent_Identity=25.8333333333333, Blast_Score=95, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17562446, Length=290, Percent_Identity=28.6206896551724, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17531913, Length=176, Percent_Identity=26.1363636363636, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI86563381, Length=313, Percent_Identity=26.517571884984, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI86563383, Length=313, Percent_Identity=26.517571884984, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21356377, Length=371, Percent_Identity=39.622641509434, Blast_Score=271, Evalue=6e-73,
Organism=Drosophila melanogaster, GI24666513, Length=373, Percent_Identity=39.9463806970509, Blast_Score=254, Evalue=9e-68,
Organism=Drosophila melanogaster, GI24646207, Length=383, Percent_Identity=38.6422976501305, Blast_Score=241, Evalue=5e-64,
Organism=Drosophila melanogaster, GI24660351, Length=372, Percent_Identity=37.6344086021505, Blast_Score=236, Evalue=2e-62,
Organism=Drosophila melanogaster, GI21355753, Length=380, Percent_Identity=32.3684210526316, Blast_Score=199, Evalue=3e-51,
Organism=Drosophila melanogaster, GI281363737, Length=385, Percent_Identity=32.2077922077922, Blast_Score=192, Evalue=2e-49,
Organism=Drosophila melanogaster, GI19920834, Length=369, Percent_Identity=27.6422764227642, Blast_Score=138, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41510; Mature: 41379

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFLASGTLPDHYEQLAKTVRDFARSVVAPVAAKHDAEHSFPYEVVRGMADMGLFGLPF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
PEEYGGMGGDYFALCLALEELGKVDQSVAITLEAGVSLGAMPVYRFGNEDQKREWLPQLT
CHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHCCCCC
SGQALAAFGLTEPGGGSDAGAPKTTARLDDGHWVINGSKQFITNSGTDITKLVTVTAVTG
CCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEECCCCEEEECCCCCCEEEEEEEEEEC
EVDGRKEISSILVPVPTQGFTAEPAYNKVGWNASDTHPLSFDDVRVPEENLLGERGRGYA
CCCCHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHH
NFLRILDEGRIAIAALSVGAAQGCVDESVRYAKEREAFGRTIGSNQAIAFKIARMEARAH
HHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHH
TARAAYYDAAALMLSGKPFKKQAAIAKLVASEAAMDNARDATQIFGGYGFMNEYPVARHY
HHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHC
RDSKILEIGEGTTEVQLMLIGRELGL
CCCCEEEECCCCCEEEEEEECHHHCC
>Mature Secondary Structure 
TDFLASGTLPDHYEQLAKTVRDFARSVVAPVAAKHDAEHSFPYEVVRGMADMGLFGLPF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
PEEYGGMGGDYFALCLALEELGKVDQSVAITLEAGVSLGAMPVYRFGNEDQKREWLPQLT
CHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHCCCCC
SGQALAAFGLTEPGGGSDAGAPKTTARLDDGHWVINGSKQFITNSGTDITKLVTVTAVTG
CCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEECCCCEEEECCCCCCEEEEEEEEEEC
EVDGRKEISSILVPVPTQGFTAEPAYNKVGWNASDTHPLSFDDVRVPEENLLGERGRGYA
CCCCHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHH
NFLRILDEGRIAIAALSVGAAQGCVDESVRYAKEREAFGRTIGSNQAIAFKIARMEARAH
HHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHH
TARAAYYDAAALMLSGKPFKKQAAIAKLVASEAAMDNARDATQIFGGYGFMNEYPVARHY
HHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHC
RDSKILEIGEGTTEVQLMLIGRELGL
CCCCEEEECCCCCEEEEEEECHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]