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The map label for this gene is rpiB [H]

Identifier: 108800565

GI number: 108800565

Start: 3838428

End: 3838916

Strand: Reverse

Name: rpiB [H]

Synonym: Mmcs_3599

Alternate gene names: 108800565

Gene position: 3838916-3838428 (Counterclockwise)

Preceding gene: 108800566

Following gene: 108800564

Centisome position: 67.29

GC content: 69.53

Gene sequence:

>489_bases
ATGGCCGCCATGCGCGTCTACCTGGGAGCCGACCACGCCGGCTACGAGTTGAAGCAGGTCATCATCGAGCACCTCCGCAG
CACCGGCCACGAACCGGTGGACTGCGGTGCGTTCGACTACGACGCCGACGACGACTACCCGGCGTTCTGCATCGCCGCGG
CGGAGAAGACCGTCGCCGATCCGGGCAGCCTCGGCATCGTGCTGGGCGGGTCGGGTAACGGTGAGCAGATCGCCGCGAAC
AAGGTGCCCGGCGCCCGCTGCGCGCTGGCCTGGAGCGTCGAGACCGCCAAGCTGGCCCGCGAACACAACAACGCGCAGCT
CATCGGGCTCGGTGGGCGCATGCACTCCGAGGCCGACGCGCTCGCGATCGTCGACGCGTTCCTTGCCACGCCGTGGTCGA
AAGCCGAACGCCACCAACGGCGTATCGACATCCTCTCCGAATACGAGCGGACCCACGAAGCGCCGCCGGTGCCCGGCGCC
CCTGCCTGA

Upstream 100 bases:

>100_bases
CGGCCCGCCGATCGGCAGGGTGGCCGGGCTCGACCCGGTCACGTCGTCGGACTTCATCAAGGAGCGCCTCGACGCAATCA
CCGTCGGCTGACCTGTCACA

Downstream 100 bases:

>100_bases
CGGATGCCCGAGGGCCATACGCTGCACCGGCTCGCCCGGCTGCACCAGAAGCGGTACAAGGGCCAGCGGGTGCGGGTGAG
CAGTCCGCAGGGCCGGTTCG

Product: ribose-5-phosphate isomerase B

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MAAMRVYLGADHAGYELKQVIIEHLRSTGHEPVDCGAFDYDADDDYPAFCIAAAEKTVADPGSLGIVLGGSGNGEQIAAN
KVPGARCALAWSVETAKLAREHNNAQLIGLGGRMHSEADALAIVDAFLATPWSKAERHQRRIDILSEYERTHEAPPVPGA
PA

Sequences:

>Translated_162_residues
MAAMRVYLGADHAGYELKQVIIEHLRSTGHEPVDCGAFDYDADDDYPAFCIAAAEKTVADPGSLGIVLGGSGNGEQIAAN
KVPGARCALAWSVETAKLAREHNNAQLIGLGGRMHSEADALAIVDAFLATPWSKAERHQRRIDILSEYERTHEAPPVPGA
PA
>Mature_161_residues
AAMRVYLGADHAGYELKQVIIEHLRSTGHEPVDCGAFDYDADDDYPAFCIAAAEKTVADPGSLGIVLGGSGNGEQIAANK
VPGARCALAWSVETAKLAREHNNAQLIGLGGRMHSEADALAIVDAFLATPWSKAERHQRRIDILSEYERTHEAPPVPGAP
A

Specific function: In Addition To Its Activity On D-Ribose 5-Phosphate It Probably Also Has Activity On D-Allose 6-Phosphate. [C]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=146, Percent_Identity=32.1917808219178, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011860
- InterPro:   IPR003500 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 17245; Mature: 17114

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAMRVYLGADHAGYELKQVIIEHLRSTGHEPVDCGAFDYDADDDYPAFCIAAAEKTVAD
CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCC
PGSLGIVLGGSGNGEQIAANKVPGARCALAWSVETAKLAREHNNAQLIGLGGRMHSEADA
CCCEEEEECCCCCCCEEECCCCCCCEEEEEECHHHHHHHHHCCCEEEEEECCCCCCCHHH
LAIVDAFLATPWSKAERHQRRIDILSEYERTHEAPPVPGAPA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AAMRVYLGADHAGYELKQVIIEHLRSTGHEPVDCGAFDYDADDDYPAFCIAAAEKTVAD
CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCC
PGSLGIVLGGSGNGEQIAANKVPGARCALAWSVETAKLAREHNNAQLIGLGGRMHSEADA
CCCEEEEECCCCCCCEEECCCCCCCEEEEEECHHHHHHHHHCCCEEEEEECCCCCCCHHH
LAIVDAFLATPWSKAERHQRRIDILSEYERTHEAPPVPGAPA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]