| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800557
Identifier: 108800557
GI number: 108800557
Start: 3827776
End: 3829029
Strand: Reverse
Name: 108800557
Synonym: Mmcs_3591
Alternate gene names: NA
Gene position: 3829029-3827776 (Counterclockwise)
Preceding gene: 108800559
Following gene: 108800556
Centisome position: 67.11
GC content: 68.34
Gene sequence:
>1254_bases TTGTCTGTCAATGGGTCGAGAGTTCCGGCACCCGCGATCGCGATGATTTCTTCGCTGGAATCACGCCTTGTGAGGGTCAA ATACATCGCCGCCGCGCTCGTCGGCGTGTGCGTCGGCGCCCTGTTGGGTGGGTTGGCCTTCGCGGCGATGGGCACCGATA CGACAGCGACAGCCTTTGTGCGTCTACAGAATCCGGCAGACCTGACGGCGATCGCGGCGGGCGCGAGTCAGGTCACTCCG GACAATCAAGGCAATACGAGCAATTTCGTCGGCGGGGAAATCGCATATCTGTCCGGCGAGGGTTTCGCCCAGGCGGTGGC CAGGAAAATGGCGATGGACGAGCCGGCGGAGCTGAATGTCGCGCAAGCCAGCGAGTCGGCTGTGGTCACGATCAGCAATA GCAGCAAATCTCGTGGCGATGCGATCAGGACCGTTCAGGTGGCGATCGATCTGTACCGGCAGGAGCTTGCGCAGCGGGTC GACGAGCAACTTCGGACCATCCTCGCCGCACTGTCGCGGTGGCAGCAGGACGAGACCGTCGATCCTGTGCGGATGCAAGA ACTCGCGCGCATCCGGGCCGCCGTCGAACTCCAGGCGAGCGAGGCCTCGACGTTGCTGGTTGTGCAGCCCCCGACGCCGA ACCACGACAGCTCCGGTCAGTGGTTGATCGGGGTGTTCCTCGGCGGGCTCCTCGGCGGCTCCGTCGCGGTGGCCATCCTG CTCGCGCGTGGGCGGCGTTCCGGCCGCGCGGCGATGACGGCGACGCTGACCGACAGCGTCGACGGTGTGCTCGTGCCCGC GGTCGATCTCGGCGCCGCATCCCCCGACAACCACGACGGCGAGCAGGCCCGGGTCGCCCGCACCCTCTATGCGCAATGCC CGACGGCGCGGGGCGGCGTGCTGCTCGTCATCGGTGCGTCACCGTCCTCGGGTAGCGCCGAGGTGGCCGAGCTTCTCGAA CTCGGGGCGGCCGACCAGCCCCCGTCGGTCCGGGTGCGCCACGGCGGAGTCGTGGGTGATCCGACGCTGACCCCCGAGCT GATCGCCGCCGCGACGGGGATCGTCCTCGTGGCCCGCATCGACGCCGACACCGCGGCACAGGCGGTGGCGCTGCGCTCCG CGACCGCCGACAGCGACGCTCCGGTGGTCGCCGCGTTCACCTACCACCGCGCCGGCGGTGCACACCGGAAGAAACGGAAG CCCGAGGTGTCACCCCGGCAGGACGTCGACGATGCAGAGCGGAGTATGCAGTGA
Upstream 100 bases:
>100_bases GTTTACTGGGCGTTCGCCGATATCTGTGTCGCGCCCGGCGAAGCGTTTCGGGCCACTACGATATTGGTCGCATCGAGGGT CAGGACGGAGCGCCGCACAG
Downstream 100 bases:
>100_bases CGGTCGCGATCGTCCACGAACGGTTGACCGAGATCGCCGGATCGGAACACGTGGTCGCCGAGTTCGCCCGGCAGTGGCCG GACGCGCCGGTCAACATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MSVNGSRVPAPAIAMISSLESRLVRVKYIAAALVGVCVGALLGGLAFAAMGTDTTATAFVRLQNPADLTAIAAGASQVTP DNQGNTSNFVGGEIAYLSGEGFAQAVARKMAMDEPAELNVAQASESAVVTISNSSKSRGDAIRTVQVAIDLYRQELAQRV DEQLRTILAALSRWQQDETVDPVRMQELARIRAAVELQASEASTLLVVQPPTPNHDSSGQWLIGVFLGGLLGGSVAVAIL LARGRRSGRAAMTATLTDSVDGVLVPAVDLGAASPDNHDGEQARVARTLYAQCPTARGGVLLVIGASPSSGSAEVAELLE LGAADQPPSVRVRHGGVVGDPTLTPELIAAATGIVLVARIDADTAAQAVALRSATADSDAPVVAAFTYHRAGGAHRKKRK PEVSPRQDVDDAERSMQ
Sequences:
>Translated_417_residues MSVNGSRVPAPAIAMISSLESRLVRVKYIAAALVGVCVGALLGGLAFAAMGTDTTATAFVRLQNPADLTAIAAGASQVTP DNQGNTSNFVGGEIAYLSGEGFAQAVARKMAMDEPAELNVAQASESAVVTISNSSKSRGDAIRTVQVAIDLYRQELAQRV DEQLRTILAALSRWQQDETVDPVRMQELARIRAAVELQASEASTLLVVQPPTPNHDSSGQWLIGVFLGGLLGGSVAVAIL LARGRRSGRAAMTATLTDSVDGVLVPAVDLGAASPDNHDGEQARVARTLYAQCPTARGGVLLVIGASPSSGSAEVAELLE LGAADQPPSVRVRHGGVVGDPTLTPELIAAATGIVLVARIDADTAAQAVALRSATADSDAPVVAAFTYHRAGGAHRKKRK PEVSPRQDVDDAERSMQ >Mature_416_residues SVNGSRVPAPAIAMISSLESRLVRVKYIAAALVGVCVGALLGGLAFAAMGTDTTATAFVRLQNPADLTAIAAGASQVTPD NQGNTSNFVGGEIAYLSGEGFAQAVARKMAMDEPAELNVAQASESAVVTISNSSKSRGDAIRTVQVAIDLYRQELAQRVD EQLRTILAALSRWQQDETVDPVRMQELARIRAAVELQASEASTLLVVQPPTPNHDSSGQWLIGVFLGGLLGGSVAVAILL ARGRRSGRAAMTATLTDSVDGVLVPAVDLGAASPDNHDGEQARVARTLYAQCPTARGGVLLVIGASPSSGSAEVAELLEL GAADQPPSVRVRHGGVVGDPTLTPELIAAATGIVLVARIDADTAAQAVALRSATADSDAPVVAAFTYHRAGGAHRKKRKP EVSPRQDVDDAERSMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43090; Mature: 42959
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNGSRVPAPAIAMISSLESRLVRVKYIAAALVGVCVGALLGGLAFAAMGTDTTATAFV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE RLQNPADLTAIAAGASQVTPDNQGNTSNFVGGEIAYLSGEGFAQAVARKMAMDEPAELNV EECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCC AQASESAVVTISNSSKSRGDAIRTVQVAIDLYRQELAQRVDEQLRTILAALSRWQQDETV EECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DPVRMQELARIRAAVELQASEASTLLVVQPPTPNHDSSGQWLIGVFLGGLLGGSVAVAIL CHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHH LARGRRSGRAAMTATLTDSVDGVLVPAVDLGAASPDNHDGEQARVARTLYAQCPTARGGV HHHCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCE LLVIGASPSSGSAEVAELLELGAADQPPSVRVRHGGVVGDPTLTPELIAAATGIVLVARI EEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCEECCCCCCHHHHHHHCCEEEEEEE DADTAAQAVALRSATADSDAPVVAAFTYHRAGGAHRKKRKPEVSPRQDVDDAERSMQ CCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure SVNGSRVPAPAIAMISSLESRLVRVKYIAAALVGVCVGALLGGLAFAAMGTDTTATAFV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE RLQNPADLTAIAAGASQVTPDNQGNTSNFVGGEIAYLSGEGFAQAVARKMAMDEPAELNV EECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCC AQASESAVVTISNSSKSRGDAIRTVQVAIDLYRQELAQRVDEQLRTILAALSRWQQDETV EECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DPVRMQELARIRAAVELQASEASTLLVVQPPTPNHDSSGQWLIGVFLGGLLGGSVAVAIL CHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHH LARGRRSGRAAMTATLTDSVDGVLVPAVDLGAASPDNHDGEQARVARTLYAQCPTARGGV HHHCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCE LLVIGASPSSGSAEVAELLELGAADQPPSVRVRHGGVVGDPTLTPELIAAATGIVLVARI EEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCEECCCCCCHHHHHHHCCEEEEEEE DADTAAQAVALRSATADSDAPVVAAFTYHRAGGAHRKKRKPEVSPRQDVDDAERSMQ CCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA