| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800534
Identifier: 108800534
GI number: 108800534
Start: 3799969
End: 3801057
Strand: Reverse
Name: 108800534
Synonym: Mmcs_3568
Alternate gene names: NA
Gene position: 3801057-3799969 (Counterclockwise)
Preceding gene: 108800535
Following gene: 108800533
Centisome position: 66.62
GC content: 65.84
Gene sequence:
>1089_bases ATGTCCGACAGGCTTTCCCCGATCCGGGTCTTCCAGGTCGCGACCGGCAACGTCGGCACCGAGATGATCAAGCGGCTGCA GCACCGGCCCGACCTCGAACTGGTCGGCCTGCACTGCTACACACCGGACAAGATCGGCCGCGACGCCGGCGAGATCGCCG GCATCGACCCGATCGGCGTGACCGCCACCGGTTCGGTCGACGAGATCATCGCGGCACGGCCCGACGTCTTGACGTTTCAC GGCGTGTTCCCCGACGAGGACCTCTACGTCAAGGTCCTCGAGGCCGGCATCGACATCGTCACCACCGCCGACTGGATCAC CGGATGGCACCGCGACCACAACCACCCGCACCCGTCGGGGAGACCGGTCACCCAGGTCCTGGCGGAAGCGGCCGCACGTG GTGGTTCCACGTTCTACGGCACCGGGATGAACCCCGGCGTGAACCAGATCCTCGGGGTCGTGTGCTCCGCCGACGTCGCC GAGATCGAGAACGTCACGACCATCGAGTCGGTCGACGTGTCGTGCCACCACAGCAGGGACACCTGGATCGAGGTCGGCTA CGGCCAACCCGTCGACGATCCGGACATCCCGGGCAAGTTGGAGAAGTACACGCGCGTCTTCGCCGACAGCGTGCTGATGA TGGCCGACTGCTTCGGCCTGCAACTCGACGAGGTGACCTTCTCCTACGAGCTCGGTGCCTGCACCAAGGACGTCGACCTC GGTTGGTACCAGCTGCCGAAGGGATCGCTCGGGGGCAACTACATCAAGTACCAGGGCATGGTGGACGGGGTGCCCCGCGT CGAGACGCACCTCGAGTGGCAGATGACCCCGTACACCGACCCCAGCTGGGACATCAAGGGCTGCTACATCACCCAGATCA AGGGCGATCCGTGCATCTACAACAAACACATGATCTTCCCGAAGCCCGGCGTGGACCTGTCCGACCCCGCATCGTTCGCC TCGATCGGCATGACCGTCACCGGGCTTCCCGCGCTCAACGCGATCGCCTCCGTCGTCGCCGCCCCGCCCGGACTGTTGAC CAGCGCCGATCTACCGCTGCGCGGGTTCGCGGGCCGGTTCAAGATCTGA
Upstream 100 bases:
>100_bases TTTCACCGCGATCCGCCAGTGGGCCAAGCAGTTCTACCCGGACGGCATCGGTGGCAGCGCCGCCGAAGTCCACGCCGCAC TACAGAAGGGCTGAATCACC
Downstream 100 bases:
>100_bases CGCGCCGAATCCGCAACACACTGTTCACCGATCCGATGCCGACGTCACATGCGCGCCGGCGTGCCGACCGGGCCGGGATC TGCACAATTGAGGCATGGAC
Product: dihydrodipicolinate reductase
Products: NA
Alternate protein names: Dihydrodipicolinate Reductase N-Terminus Domain Protein; Dihydrodipicolinate Reductase-Like Protein; Dihydropicolinate Reductase
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MSDRLSPIRVFQVATGNVGTEMIKRLQHRPDLELVGLHCYTPDKIGRDAGEIAGIDPIGVTATGSVDEIIAARPDVLTFH GVFPDEDLYVKVLEAGIDIVTTADWITGWHRDHNHPHPSGRPVTQVLAEAAARGGSTFYGTGMNPGVNQILGVVCSADVA EIENVTTIESVDVSCHHSRDTWIEVGYGQPVDDPDIPGKLEKYTRVFADSVLMMADCFGLQLDEVTFSYELGACTKDVDL GWYQLPKGSLGGNYIKYQGMVDGVPRVETHLEWQMTPYTDPSWDIKGCYITQIKGDPCIYNKHMIFPKPGVDLSDPASFA SIGMTVTGLPALNAIASVVAAPPGLLTSADLPLRGFAGRFKI
Sequences:
>Translated_362_residues MSDRLSPIRVFQVATGNVGTEMIKRLQHRPDLELVGLHCYTPDKIGRDAGEIAGIDPIGVTATGSVDEIIAARPDVLTFH GVFPDEDLYVKVLEAGIDIVTTADWITGWHRDHNHPHPSGRPVTQVLAEAAARGGSTFYGTGMNPGVNQILGVVCSADVA EIENVTTIESVDVSCHHSRDTWIEVGYGQPVDDPDIPGKLEKYTRVFADSVLMMADCFGLQLDEVTFSYELGACTKDVDL GWYQLPKGSLGGNYIKYQGMVDGVPRVETHLEWQMTPYTDPSWDIKGCYITQIKGDPCIYNKHMIFPKPGVDLSDPASFA SIGMTVTGLPALNAIASVVAAPPGLLTSADLPLRGFAGRFKI >Mature_361_residues SDRLSPIRVFQVATGNVGTEMIKRLQHRPDLELVGLHCYTPDKIGRDAGEIAGIDPIGVTATGSVDEIIAARPDVLTFHG VFPDEDLYVKVLEAGIDIVTTADWITGWHRDHNHPHPSGRPVTQVLAEAAARGGSTFYGTGMNPGVNQILGVVCSADVAE IENVTTIESVDVSCHHSRDTWIEVGYGQPVDDPDIPGKLEKYTRVFADSVLMMADCFGLQLDEVTFSYELGACTKDVDLG WYQLPKGSLGGNYIKYQGMVDGVPRVETHLEWQMTPYTDPSWDIKGCYITQIKGDPCIYNKHMIFPKPGVDLSDPASFAS IGMTVTGLPALNAIASVVAAPPGLLTSADLPLRGFAGRFKI
Specific function: Unknown
COG id: COG3804
COG function: function code S; Uncharacterized conserved protein related to dihydrodipicolinate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39214; Mature: 39083
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRLSPIRVFQVATGNVGTEMIKRLQHRPDLELVGLHCYTPDKIGRDAGEIAGIDPIGV CCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEEECCHHHCCCCHHCCCCCCCCE TATGSVDEIIAARPDVLTFHGVFPDEDLYVKVLEAGIDIVTTADWITGWHRDHNHPHPSG EECCCHHHHHHCCCCEEEEECCCCCCHHHHHEECCCCCEEEEHHHHHCCCCCCCCCCCCC RPVTQVLAEAAARGGSTFYGTGMNPGVNQILGVVCSADVAEIENVTTIESVDVSCHHSRD CHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCHHHHCCCEEEEEECCEEECCCC TWIEVGYGQPVDDPDIPGKLEKYTRVFADSVLMMADCFGLQLDEVTFSYELGACTKDVDL CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCC GWYQLPKGSLGGNYIKYQGMVDGVPRVETHLEWQMTPYTDPSWDIKGCYITQIKGDPCIY CEEECCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCEEE NKHMIFPKPGVDLSDPASFASIGMTVTGLPALNAIASVVAAPPGLLTSADLPLRGFAGRF CCEEECCCCCCCCCCCCHHHHHCEEEECCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCC KI CC >Mature Secondary Structure SDRLSPIRVFQVATGNVGTEMIKRLQHRPDLELVGLHCYTPDKIGRDAGEIAGIDPIGV CCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEEECCHHHCCCCHHCCCCCCCCE TATGSVDEIIAARPDVLTFHGVFPDEDLYVKVLEAGIDIVTTADWITGWHRDHNHPHPSG EECCCHHHHHHCCCCEEEEECCCCCCHHHHHEECCCCCEEEEHHHHHCCCCCCCCCCCCC RPVTQVLAEAAARGGSTFYGTGMNPGVNQILGVVCSADVAEIENVTTIESVDVSCHHSRD CHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCHHHHCCCEEEEEECCEEECCCC TWIEVGYGQPVDDPDIPGKLEKYTRVFADSVLMMADCFGLQLDEVTFSYELGACTKDVDL CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCC GWYQLPKGSLGGNYIKYQGMVDGVPRVETHLEWQMTPYTDPSWDIKGCYITQIKGDPCIY CEEECCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCEEE NKHMIFPKPGVDLSDPASFASIGMTVTGLPALNAIASVVAAPPGLLTSADLPLRGFAGRF CCEEECCCCCCCCCCCCHHHHHCEEEECCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCC KI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA