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The map label for this gene is yvoA [H]

Identifier: 108800497

GI number: 108800497

Start: 3755389

End: 3756147

Strand: Reverse

Name: yvoA [H]

Synonym: Mmcs_3531

Alternate gene names: 108800497

Gene position: 3756147-3755389 (Counterclockwise)

Preceding gene: 108800502

Following gene: 108800496

Centisome position: 65.83

GC content: 72.73

Gene sequence:

>759_bases
ATGCCGGCCGCCGCCAGGAAGAGCCCGCCGCAGGGCGGTGGCGACCCACCGCGTTACCTCGCCATCGCGGCGTTGGTCCG
CGACCGGATCGCCACCGAGCAGCTCGGGCCGCACACGTTGCTGCCGTCGGAACGCGAACTCGCCGAACAGCACGGCGTCA
GTCGGATGACCGCCCGGCAGGCGCTGTCGCTGCTCGAGAGCGAGGGTGTGGTCTACCGCAGACCGCCGCGTGGCACGTTC
GTCGCCGAACCGCGGGTGCGGTTCCACATCGGCAGCTTCTCCGAGGAGGTGTCCCGGCTCGGACGACGGCCCGCAGCGCG
CCTGCTGTGGGCCGAACGGCAACAGCCGACGCCCGCGGTACAGCTGGCCCTCGCGCTTCCCGACGGGGCCGCCGTGCACG
TGTTCCACCGCCTGCGCAGCGTCGACGACGCACCCGTGGCCCTCGAGACCACCTTCCTGCCCGCCGACCTGACCCCGGGC
ATCCTCGACACTCCCGAGGAGGGTTCGCTGTGGGCGGTCCTGCGCGATCGTTACGGCATGCGGTTGGCCCGGTCGACGGC
GGTGCTGGAGTCGATCGTGCTCGACGACACGTCGAGCTCCCAGCTCGCGGTGCGGGCCGGTTCTGCGGGCACGCTGCTGA
CCCGGCGCACCGAGGACGACGCCGGCCGCTGCGTGGAGTACGCGCGCGACGTCTACCGCGCCGACCGCGCCGCGTTCGAG
GTCTCCGAGGTGCTCACGGTCGACCGCACAACGGTCTGA

Upstream 100 bases:

>100_bases
TGAGCCACATCATCGTCAAGCCAGGTAACAAAGCGTTTACCCGACGCGGGCTTCGGTTCTCCTTGGCCATGTGAATCCAG
CACCCGGCTACGCTGCAGAC

Downstream 100 bases:

>100_bases
CCGGGCTCTGGCTGCCGTAAGCTCGCTGTTCGTGCAAACCCGTCCGATGAGCCGCTCGCGCGAAGAGATTCGAACGCGCA
GGCTGGGGGTGATGGGCGGG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MPAAARKSPPQGGGDPPRYLAIAALVRDRIATEQLGPHTLLPSERELAEQHGVSRMTARQALSLLESEGVVYRRPPRGTF
VAEPRVRFHIGSFSEEVSRLGRRPAARLLWAERQQPTPAVQLALALPDGAAVHVFHRLRSVDDAPVALETTFLPADLTPG
ILDTPEEGSLWAVLRDRYGMRLARSTAVLESIVLDDTSSSQLAVRAGSAGTLLTRRTEDDAGRCVEYARDVYRADRAAFE
VSEVLTVDRTTV

Sequences:

>Translated_252_residues
MPAAARKSPPQGGGDPPRYLAIAALVRDRIATEQLGPHTLLPSERELAEQHGVSRMTARQALSLLESEGVVYRRPPRGTF
VAEPRVRFHIGSFSEEVSRLGRRPAARLLWAERQQPTPAVQLALALPDGAAVHVFHRLRSVDDAPVALETTFLPADLTPG
ILDTPEEGSLWAVLRDRYGMRLARSTAVLESIVLDDTSSSQLAVRAGSAGTLLTRRTEDDAGRCVEYARDVYRADRAAFE
VSEVLTVDRTTV
>Mature_251_residues
PAAARKSPPQGGGDPPRYLAIAALVRDRIATEQLGPHTLLPSERELAEQHGVSRMTARQALSLLESEGVVYRRPPRGTFV
AEPRVRFHIGSFSEEVSRLGRRPAARLLWAERQQPTPAVQLALALPDGAAVHVFHRLRSVDDAPVALETTFLPADLTPGI
LDTPEEGSLWAVLRDRYGMRLARSTAVLESIVLDDTSSSQLAVRAGSAGTLLTRRTEDDAGRCVEYARDVYRADRAAFEV
SEVLTVDRTTV

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790118, Length=213, Percent_Identity=26.2910798122066, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786950, Length=237, Percent_Identity=29.535864978903, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790304, Length=214, Percent_Identity=26.1682242990654, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788418, Length=236, Percent_Identity=28.3898305084746, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI87082252, Length=154, Percent_Identity=25.3246753246753, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 27552; Mature: 27420

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAAARKSPPQGGGDPPRYLAIAALVRDRIATEQLGPHTLLPSERELAEQHGVSRMTARQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHH
ALSLLESEGVVYRRPPRGTFVAEPRVRFHIGSFSEEVSRLGRRPAARLLWAERQQPTPAV
HHHHHHHCCCEEECCCCCCEEECCCEEEEECCHHHHHHHHCCCHHHHHHHHHCCCCCCCE
QLALALPDGAAVHVFHRLRSVDDAPVALETTFLPADLTPGILDTPEEGSLWAVLRDRYGM
EEEEECCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHH
RLARSTAVLESIVLDDTSSSQLAVRAGSAGTLLTRRTEDDAGRCVEYARDVYRADRAAFE
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
VSEVLTVDRTTV
HHHHHHCCCCCC
>Mature Secondary Structure 
PAAARKSPPQGGGDPPRYLAIAALVRDRIATEQLGPHTLLPSERELAEQHGVSRMTARQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHH
ALSLLESEGVVYRRPPRGTFVAEPRVRFHIGSFSEEVSRLGRRPAARLLWAERQQPTPAV
HHHHHHHCCCEEECCCCCCEEECCCEEEEECCHHHHHHHHCCCHHHHHHHHHCCCCCCCE
QLALALPDGAAVHVFHRLRSVDDAPVALETTFLPADLTPGILDTPEEGSLWAVLRDRYGM
EEEEECCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHH
RLARSTAVLESIVLDDTSSSQLAVRAGSAGTLLTRRTEDDAGRCVEYARDVYRADRAAFE
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
VSEVLTVDRTTV
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]