| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800474
Identifier: 108800474
GI number: 108800474
Start: 3734756
End: 3735730
Strand: Reverse
Name: 108800474
Synonym: Mmcs_3508
Alternate gene names: NA
Gene position: 3735730-3734756 (Counterclockwise)
Preceding gene: 108800475
Following gene: 108800473
Centisome position: 65.48
GC content: 67.18
Gene sequence:
>975_bases ATGTTGGCACGCAACGCCGAATCGCTGTACTGGATCGGACGCTACGTCGAACGCGCTGACGACACCGCCCGCATCCTCGA CGTCACGGTGCACCAACTGCTCGAGGACTCCAGCGTCGACCCGGACCGAGTGGCCCGGACGCTGCTGCGGGTGCTCGGCA TGGAGGCGCCCGACCATCCACTCGACGTGTGGTCGCTGACCGACATCGTCGCGTTCAACCGCGACAGCGCCGACGGTACG TCGATCGTCGACTCGATCTCGGCGGCGCGCGAAAACGCCCGTGGCGCACGTGAGGTCACCTCGACGGAGATCTGGGAGTG CCTCAACACCACCTACAACGCCCTGGCCGAACGGGAGCGCGCCGCCAAACGCTTCGGCCCGCACGAGTTCCTGTCCTACG TCGAGGGGCGCGCCGCGATGTTCGCCGGGCTGGCCGATTCCACGCTCAGCCGCGACGACGGTTACCGGTTCATGGTGCTC GGCCGGGCGATCGAACGCGTCGACATGATGGTCCGGTTGTTGCTCTCGCGCGTCGGCGACAGCGGATCGTCGCCCGCGTG GGTCACGCTGCTGCGTTCGGCCGGTGCGCACGACACCTACCTGCGCACCTACCGGGGCGTGCTGGACGCCGGCCGCGTCG TCGAGTTCATGATGCTCGACCGGCTGTTCCCGCGGTCGATCTTCTATTCGCTGCGCCTCGCCGAGCACAACCTCGACGAA CTGCTCAACAGACCGCACAACCGGTTGGGCGCCACGGCCGAAGCGCAGCGTCTGCTGGGCCGCGCGCGCAGCGAGTTGGA GTTCATGCATCCCGGTGTCCTCCTCGAATCGCTCGAGCAACGGCTGGCCGGGTTGCAGAAGACGTGCAGCGACGTCGGAG AAGCGTTGGCGCTGCAGTACTTCCACGTCGCGCCGTGGGTGGCTTGGACCGATGCCGGTCGCAATGCGATGGTCATCGAA GAAGGGGAGGTCTAG
Upstream 100 bases:
>100_bases AGTCGGCGAAGGCCAACAAGGTGGACAAGAATGCGGATGCCCAGTCCGCAGAACAGCTGCAGCAGCAGCAACAGCAGCAG CAGTAGGGGGTTGTCGGAAC
Downstream 100 bases:
>100_bases CTATGTGGCGGATGCGGGTGGTACATGCGACGGGCTATGCCTACAAGTCGCCGGTCACCGCGTCGTTCAACGAGGCCCGT TTGACGCCGCGTTCGGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MLARNAESLYWIGRYVERADDTARILDVTVHQLLEDSSVDPDRVARTLLRVLGMEAPDHPLDVWSLTDIVAFNRDSADGT SIVDSISAARENARGAREVTSTEIWECLNTTYNALAERERAAKRFGPHEFLSYVEGRAAMFAGLADSTLSRDDGYRFMVL GRAIERVDMMVRLLLSRVGDSGSSPAWVTLLRSAGAHDTYLRTYRGVLDAGRVVEFMMLDRLFPRSIFYSLRLAEHNLDE LLNRPHNRLGATAEAQRLLGRARSELEFMHPGVLLESLEQRLAGLQKTCSDVGEALALQYFHVAPWVAWTDAGRNAMVIE EGEV
Sequences:
>Translated_324_residues MLARNAESLYWIGRYVERADDTARILDVTVHQLLEDSSVDPDRVARTLLRVLGMEAPDHPLDVWSLTDIVAFNRDSADGT SIVDSISAARENARGAREVTSTEIWECLNTTYNALAERERAAKRFGPHEFLSYVEGRAAMFAGLADSTLSRDDGYRFMVL GRAIERVDMMVRLLLSRVGDSGSSPAWVTLLRSAGAHDTYLRTYRGVLDAGRVVEFMMLDRLFPRSIFYSLRLAEHNLDE LLNRPHNRLGATAEAQRLLGRARSELEFMHPGVLLESLEQRLAGLQKTCSDVGEALALQYFHVAPWVAWTDAGRNAMVIE EGEV >Mature_324_residues MLARNAESLYWIGRYVERADDTARILDVTVHQLLEDSSVDPDRVARTLLRVLGMEAPDHPLDVWSLTDIVAFNRDSADGT SIVDSISAARENARGAREVTSTEIWECLNTTYNALAERERAAKRFGPHEFLSYVEGRAAMFAGLADSTLSRDDGYRFMVL GRAIERVDMMVRLLLSRVGDSGSSPAWVTLLRSAGAHDTYLRTYRGVLDAGRVVEFMMLDRLFPRSIFYSLRLAEHNLDE LLNRPHNRLGATAEAQRLLGRARSELEFMHPGVLLESLEQRLAGLQKTCSDVGEALALQYFHVAPWVAWTDAGRNAMVIE EGEV
Specific function: Unknown
COG id: COG2307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36329; Mature: 36329
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARNAESLYWIGRYVERADDTARILDVTVHQLLEDSSVDPDRVARTLLRVLGMEAPDHP CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC LDVWSLTDIVAFNRDSADGTSIVDSISAARENARGAREVTSTEIWECLNTTYNALAERER CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AAKRFGPHEFLSYVEGRAAMFAGLADSTLSRDDGYRFMVLGRAIERVDMMVRLLLSRVGD HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCC SGSSPAWVTLLRSAGAHDTYLRTYRGVLDAGRVVEFMMLDRLFPRSIFYSLRLAEHNLDE CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LLNRPHNRLGATAEAQRLLGRARSELEFMHPGVLLESLEQRLAGLQKTCSDVGEALALQY HHCCCHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FHVAPWVAWTDAGRNAMVIEEGEV HHHCCHHEEECCCCCEEEEECCCC >Mature Secondary Structure MLARNAESLYWIGRYVERADDTARILDVTVHQLLEDSSVDPDRVARTLLRVLGMEAPDHP CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC LDVWSLTDIVAFNRDSADGTSIVDSISAARENARGAREVTSTEIWECLNTTYNALAERER CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AAKRFGPHEFLSYVEGRAAMFAGLADSTLSRDDGYRFMVLGRAIERVDMMVRLLLSRVGD HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCC SGSSPAWVTLLRSAGAHDTYLRTYRGVLDAGRVVEFMMLDRLFPRSIFYSLRLAEHNLDE CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LLNRPHNRLGATAEAQRLLGRARSELEFMHPGVLLESLEQRLAGLQKTCSDVGEALALQY HHCCCHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FHVAPWVAWTDAGRNAMVIEEGEV HHHCCHHEEECCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA