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The map label for this gene is ydhO [C]

Identifier: 108800253

GI number: 108800253

Start: 3483795

End: 3484913

Strand: Reverse

Name: ydhO [C]

Synonym: Mmcs_3287

Alternate gene names: 108800253

Gene position: 3484913-3483795 (Counterclockwise)

Preceding gene: 108800254

Following gene: 108800252

Centisome position: 61.08

GC content: 71.22

Gene sequence:

>1119_bases
TTGAGGCTCGTTGGCGCGCAGTGGGGCATCCGTGTTCTTAAGCGACCCGCAGTCGGTGCGATAGCGGCTCTGGCCATGTT
CTCCTCGGTGCTGGCCGGCAGCGCGCTGGCCGATCCGGCCGACGACGCGCTGGCAAAGCTTAACGAGTTGTCGCGGCAGG
CCGAGCAGACCACCGAGGCCATGCACTCGGCGCAGCTCGACCTCAACGACAAGCAGGCCGCCCAGCAGGCCGCCGAGGCC
AGACACGCCGCCGATCTGACCGCGGCTGCCGAGGCCAAGACCCAGATGGCCACCTTCCAGACGGCGGTGAACAAGGTCGC
AGCAACCCAGTACATGGGCGGCCGCACCGACGGGATGAGCGCGATCCTCACCGCCGACTCGCCGCAGCAGTTCATCGACC
AGCTCTCCGTACAGCGGGTGATGGCCGGCGAGATGGCAGCGCGCATGGCGGGTTTCCGGGACGCCACCACCAGGGCCGCC
GCCGCCGAGCAGGCGTCGGCGCGGTCCGCCCAAGATGCCAAGACCGCCGCCGAACAGGCCGCCCAGGTGCGCGCCGATCT
GCAGAGCAAGCAGAGCCGGCTGCAGACCCAGATCGCCGTCGTCAAATCGCAGTACGAGGCGCTCACCCCCCGCCAGCGCG
AGGCGCTGGCCGCACTTCCGCCCGCACCCGCCGTTCCGGCGCCGGCCGCGGCGCCTCCCGCCAACGATCCCGGCGTGCTG
GCCGCCCCGCCCGGGGCCATGCCTCCGGGTGACATCGCACCGCCGCCGGGCGGTGCCACCCGCGCCGTCGCCGTGCAGGC
CGCGCTGAGCCGCATCGGCTCGCCGTACTCCTGGGGCGGGTCCGGCCCCAACGCGTTCGACTGCTCCGGGCTGGTCATGT
GGGCCTTCCAGCAGGAGGGCATCTCGCTGCCACACTCCAGCCAGGCGTTGGCCCGCGGTGGGCAGCCGGTGTCGACGGAC
CAGATGCAGCCGGGTGACCTCGTCACGTACTACTCCGATGCCTCGCACGTCGGTATCTACATCGGTGACGGGATGATGGT
GCACGCGTCGACCTACGGCACGCCGGTGCGCGTCGCTCCGGTGAACAACGCGCCGATCCACAACGTGCGCCGCTACTAG

Upstream 100 bases:

>100_bases
TTGGCTCTCCTGTTGGACAAGCCCGATGCCGTTTCGTAACCTATCTGAGACCTAAGAGCAGTTCGAGGCGGCTCGTAACG
CCAGTTGAAGGACGCAAATC

Downstream 100 bases:

>100_bases
CTCGTGGCCACCGGGCCCGGCTCCACCCGACCCCGACGGGTCCTGCTCGCGCTGCTGCTGGCCGAGTTCGTCTCCGCGGT
CCTGATGCTCGACCGGTCGC

Product: NLP/P60

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MRLVGAQWGIRVLKRPAVGAIAALAMFSSVLAGSALADPADDALAKLNELSRQAEQTTEAMHSAQLDLNDKQAAQQAAEA
RHAADLTAAAEAKTQMATFQTAVNKVAATQYMGGRTDGMSAILTADSPQQFIDQLSVQRVMAGEMAARMAGFRDATTRAA
AAEQASARSAQDAKTAAEQAAQVRADLQSKQSRLQTQIAVVKSQYEALTPRQREALAALPPAPAVPAPAAAPPANDPGVL
AAPPGAMPPGDIAPPPGGATRAVAVQAALSRIGSPYSWGGSGPNAFDCSGLVMWAFQQEGISLPHSSQALARGGQPVSTD
QMQPGDLVTYYSDASHVGIYIGDGMMVHASTYGTPVRVAPVNNAPIHNVRRY

Sequences:

>Translated_372_residues
MRLVGAQWGIRVLKRPAVGAIAALAMFSSVLAGSALADPADDALAKLNELSRQAEQTTEAMHSAQLDLNDKQAAQQAAEA
RHAADLTAAAEAKTQMATFQTAVNKVAATQYMGGRTDGMSAILTADSPQQFIDQLSVQRVMAGEMAARMAGFRDATTRAA
AAEQASARSAQDAKTAAEQAAQVRADLQSKQSRLQTQIAVVKSQYEALTPRQREALAALPPAPAVPAPAAAPPANDPGVL
AAPPGAMPPGDIAPPPGGATRAVAVQAALSRIGSPYSWGGSGPNAFDCSGLVMWAFQQEGISLPHSSQALARGGQPVSTD
QMQPGDLVTYYSDASHVGIYIGDGMMVHASTYGTPVRVAPVNNAPIHNVRRY
>Mature_372_residues
MRLVGAQWGIRVLKRPAVGAIAALAMFSSVLAGSALADPADDALAKLNELSRQAEQTTEAMHSAQLDLNDKQAAQQAAEA
RHAADLTAAAEAKTQMATFQTAVNKVAATQYMGGRTDGMSAILTADSPQQFIDQLSVQRVMAGEMAARMAGFRDATTRAA
AAEQASARSAQDAKTAAEQAAQVRADLQSKQSRLQTQIAVVKSQYEALTPRQREALAALPPAPAVPAPAAAPPANDPGVL
AAPPGAMPPGDIAPPPGGATRAVAVQAALSRIGSPYSWGGSGPNAFDCSGLVMWAFQQEGISLPHSSQALARGGQPVSTD
QMQPGDLVTYYSDASHVGIYIGDGMMVHASTYGTPVRVAPVNNAPIHNVRRY

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787944, Length=108, Percent_Identity=32.4074074074074, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1788501, Length=82, Percent_Identity=43.9024390243902, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1786421, Length=105, Percent_Identity=31.4285714285714, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 38541; Mature: 38541

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVGAQWGIRVLKRPAVGAIAALAMFSSVLAGSALADPADDALAKLNELSRQAEQTTEA
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MHSAQLDLNDKQAAQQAAEARHAADLTAAAEAKTQMATFQTAVNKVAATQYMGGRTDGMS
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
AILTADSPQQFIDQLSVQRVMAGEMAARMAGFRDATTRAAAAEQASARSAQDAKTAAEQA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQVRADLQSKQSRLQTQIAVVKSQYEALTPRQREALAALPPAPAVPAPAAAPPANDPGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE
AAPPGAMPPGDIAPPPGGATRAVAVQAALSRIGSPYSWGGSGPNAFDCSGLVMWAFQQEG
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCC
ISLPHSSQALARGGQPVSTDQMQPGDLVTYYSDASHVGIYIGDGMMVHASTYGTPVRVAP
CCCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCEEEEEE
VNNAPIHNVRRY
CCCCCCHHCCCC
>Mature Secondary Structure
MRLVGAQWGIRVLKRPAVGAIAALAMFSSVLAGSALADPADDALAKLNELSRQAEQTTEA
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MHSAQLDLNDKQAAQQAAEARHAADLTAAAEAKTQMATFQTAVNKVAATQYMGGRTDGMS
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
AILTADSPQQFIDQLSVQRVMAGEMAARMAGFRDATTRAAAAEQASARSAQDAKTAAEQA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQVRADLQSKQSRLQTQIAVVKSQYEALTPRQREALAALPPAPAVPAPAAAPPANDPGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE
AAPPGAMPPGDIAPPPGGATRAVAVQAALSRIGSPYSWGGSGPNAFDCSGLVMWAFQQEG
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCC
ISLPHSSQALARGGQPVSTDQMQPGDLVTYYSDASHVGIYIGDGMMVHASTYGTPVRVAP
CCCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCEEEEEE
VNNAPIHNVRRY
CCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]