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The map label for this gene is yfcH [C]

Identifier: 108800211

GI number: 108800211

Start: 3440703

End: 3442061

Strand: Reverse

Name: yfcH [C]

Synonym: Mmcs_3245

Alternate gene names: 108800211

Gene position: 3442061-3440703 (Counterclockwise)

Preceding gene: 108800213

Following gene: 108800208

Centisome position: 60.33

GC content: 74.76

Gene sequence:

>1359_bases
ATGGGCATCGAGTACGAGAGCATCGTCGACCACCCGATCGACGAGGTGTTCGCCTGGCACACCCGGCCGGGCGCCATGCC
CCGGCTGGTGCCCCCGTGGCAGCCGATGACGGTGGTCGCCGAGACGCCGTCGCTGGCGGACGGGCAGGCGGTGCTGGGCC
TGCCCGGCGGGCTGCGCTGGATCGCCCAGCACGACCCGGCCGGGTACGACCCGCCGTACCGGTTCGTCGACGCCCTGTCG
TCGCGGGGGGTGATGTCGCTGCCGCCACGGGTGATCGGCTGGTGGCGGCACACCCACGACTTCGCCGACGCCGGTGCCGG
CCGCACCCTGGTACGCGACCGCGTCGACACGACCGTGCCGGCAGCGATGCTGCGGTCGACCTTCGTCTACCGGCACCGCC
AACTGGCCGACGACCTGGCCTCCCACCGGGACGCCGCCGCGGCCGGGCGCGGGCCACTCGTCGTCGCCGTCACCGGTGCG
TCCGGATTGGTCGGCGCGGCGCTGACCGCGATGCTGACCAGCGGTGGGCACCGGGTCATCCGGCTCGTGCGGGGGGCCCC
GAAGGGCCCGGACGAGCGGCGATGGGATCCGCAGCACCCGGCGGCGGACCTGCTGACCGGTGTGGACGCCGTGGTGCACC
TGGCGGGTGCCTCCATCGCCGGCCGGTTCACCGCGTCGCACAAGGCCGCGATCCGTGACAGCCGCATCGAGCCCACCCGC
CGGCTCGCGGAGCTGGCCGCCGCAGGCGGACCGCGCATCTTCGTCAGCGCCTCGGCGATCGGGTTCTACGGCTATGACCG
CGGAGATGAGGTGCTGGACGAGGACAGCAGCCAGGGCACCGGTTTCCTGGCCGACGTCGTCGCGGACTGGGAGACCGCCA
CCGGGCCGGCGGCCGACGCGGGAGCGCGGGTGGTCACCGTGCGCACCGGAATCGTGCAGGCCGCCGCGGGCGGGACGCTG
CGGCTGTTCCGGCCGCTGTTCGGCGCCGGGCTGGGCGGCCGGCTGGGCACCGGGCGGCAGTGGCTGTCGTGGATCGGGCT
CGACGACCTGCTCGATGTGTACTACCACGCGCTGTGGGACGAGCGGATGAGCGGGCCGGTCAACGCAGTCGCGCCGGAGC
CGGTGCGCAACGCCGACTACACCAGAACGCTGGCGGCGGTGCTGCACCGGCCGGCCGTGCTGCCCGTCCCGTCAGCCGGC
CCGCGGCTGCTGCTGGGCGCGCAGGGCGCCCGTGAACTGGCCGAGGCCGACCAACGGGTGGCGCCGGCGAAACTGCTCTC
ACTGGGCCACCGTTTCCGCCAGCCCCACCTCGCGGATGCGCTCGCCCATCAGCTCGGACAGGGCACCCCCCCGACGTAG

Upstream 100 bases:

>100_bases
CCATCCGCTCATCGCCATGAGGGCGTACCCATCGCGCAGCGCGGCAATCCACCTTCCGGGCGGCGCCGAATACTGACTGC
ACACCGGTGACGGGAGAACC

Downstream 100 bases:

>100_bases
GACAGGAACGCGTCGACCAGTCCGCGGATTCGGGTGGCCGCATCGCCTTCGAGTTCCTTTGTGCGGGTGAGCAGTTCGTC
GTGGTCGAGGCCGAAGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MGIEYESIVDHPIDEVFAWHTRPGAMPRLVPPWQPMTVVAETPSLADGQAVLGLPGGLRWIAQHDPAGYDPPYRFVDALS
SRGVMSLPPRVIGWWRHTHDFADAGAGRTLVRDRVDTTVPAAMLRSTFVYRHRQLADDLASHRDAAAAGRGPLVVAVTGA
SGLVGAALTAMLTSGGHRVIRLVRGAPKGPDERRWDPQHPAADLLTGVDAVVHLAGASIAGRFTASHKAAIRDSRIEPTR
RLAELAAAGGPRIFVSASAIGFYGYDRGDEVLDEDSSQGTGFLADVVADWETATGPAADAGARVVTVRTGIVQAAAGGTL
RLFRPLFGAGLGGRLGTGRQWLSWIGLDDLLDVYYHALWDERMSGPVNAVAPEPVRNADYTRTLAAVLHRPAVLPVPSAG
PRLLLGAQGARELAEADQRVAPAKLLSLGHRFRQPHLADALAHQLGQGTPPT

Sequences:

>Translated_452_residues
MGIEYESIVDHPIDEVFAWHTRPGAMPRLVPPWQPMTVVAETPSLADGQAVLGLPGGLRWIAQHDPAGYDPPYRFVDALS
SRGVMSLPPRVIGWWRHTHDFADAGAGRTLVRDRVDTTVPAAMLRSTFVYRHRQLADDLASHRDAAAAGRGPLVVAVTGA
SGLVGAALTAMLTSGGHRVIRLVRGAPKGPDERRWDPQHPAADLLTGVDAVVHLAGASIAGRFTASHKAAIRDSRIEPTR
RLAELAAAGGPRIFVSASAIGFYGYDRGDEVLDEDSSQGTGFLADVVADWETATGPAADAGARVVTVRTGIVQAAAGGTL
RLFRPLFGAGLGGRLGTGRQWLSWIGLDDLLDVYYHALWDERMSGPVNAVAPEPVRNADYTRTLAAVLHRPAVLPVPSAG
PRLLLGAQGARELAEADQRVAPAKLLSLGHRFRQPHLADALAHQLGQGTPPT
>Mature_451_residues
GIEYESIVDHPIDEVFAWHTRPGAMPRLVPPWQPMTVVAETPSLADGQAVLGLPGGLRWIAQHDPAGYDPPYRFVDALSS
RGVMSLPPRVIGWWRHTHDFADAGAGRTLVRDRVDTTVPAAMLRSTFVYRHRQLADDLASHRDAAAAGRGPLVVAVTGAS
GLVGAALTAMLTSGGHRVIRLVRGAPKGPDERRWDPQHPAADLLTGVDAVVHLAGASIAGRFTASHKAAIRDSRIEPTRR
LAELAAAGGPRIFVSASAIGFYGYDRGDEVLDEDSSQGTGFLADVVADWETATGPAADAGARVVTVRTGIVQAAAGGTLR
LFRPLFGAGLGGRLGTGRQWLSWIGLDDLLDVYYHALWDERMSGPVNAVAPEPVRNADYTRTLAAVLHRPAVLPVPSAGP
RLLLGAQGARELAEADQRVAPAKLLSLGHRFRQPHLADALAHQLGQGTPPT

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=293, Percent_Identity=35.4948805460751, Blast_Score=138, Evalue=1e-32,
Organism=Escherichia coli, GI1788642, Length=298, Percent_Identity=37.5838926174497, Blast_Score=166, Evalue=2e-42,
Organism=Drosophila melanogaster, GI28573846, Length=293, Percent_Identity=27.9863481228669, Blast_Score=117, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 48053; Mature: 47922

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIEYESIVDHPIDEVFAWHTRPGAMPRLVPPWQPMTVVAETPSLADGQAVLGLPGGLRW
CCCCHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEE
IAQHDPAGYDPPYRFVDALSSRGVMSLPPRVIGWWRHTHDFADAGAGRTLVRDRVDTTVP
HCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AAMLRSTFVYRHRQLADDLASHRDAAAAGRGPLVVAVTGASGLVGAALTAMLTSGGHRVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHH
RLVRGAPKGPDERRWDPQHPAADLLTGVDAVVHLAGASIAGRFTASHKAAIRDSRIEPTR
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHCCCCCHHH
RLAELAAAGGPRIFVSASAIGFYGYDRGDEVLDEDSSQGTGFLADVVADWETATGPAADA
HHHHHHHCCCCEEEEEECEEEECCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCC
GARVVTVRTGIVQAAAGGTLRLFRPLFGAGLGGRLGTGRQWLSWIGLDDLLDVYYHALWD
CCEEEEEECCHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHH
ERMSGPVNAVAPEPVRNADYTRTLAAVLHRPAVLPVPSAGPRLLLGAQGARELAEADQRV
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCEEEECCCHHHHHHHHHHC
APAKLLSLGHRFRQPHLADALAHQLGQGTPPT
CHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GIEYESIVDHPIDEVFAWHTRPGAMPRLVPPWQPMTVVAETPSLADGQAVLGLPGGLRW
CCCHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEE
IAQHDPAGYDPPYRFVDALSSRGVMSLPPRVIGWWRHTHDFADAGAGRTLVRDRVDTTVP
HCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AAMLRSTFVYRHRQLADDLASHRDAAAAGRGPLVVAVTGASGLVGAALTAMLTSGGHRVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHH
RLVRGAPKGPDERRWDPQHPAADLLTGVDAVVHLAGASIAGRFTASHKAAIRDSRIEPTR
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHCCCCCHHH
RLAELAAAGGPRIFVSASAIGFYGYDRGDEVLDEDSSQGTGFLADVVADWETATGPAADA
HHHHHHHCCCCEEEEEECEEEECCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCC
GARVVTVRTGIVQAAAGGTLRLFRPLFGAGLGGRLGTGRQWLSWIGLDDLLDVYYHALWD
CCEEEEEECCHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHH
ERMSGPVNAVAPEPVRNADYTRTLAAVLHRPAVLPVPSAGPRLLLGAQGARELAEADQRV
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCEEEECCCHHHHHHHHHHC
APAKLLSLGHRFRQPHLADALAHQLGQGTPPT
CHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]