| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800178
Identifier: 108800178
GI number: 108800178
Start: 3404781
End: 3405239
Strand: Reverse
Name: 108800178
Synonym: Mmcs_3212
Alternate gene names: NA
Gene position: 3405239-3404781 (Counterclockwise)
Preceding gene: 108800179
Following gene: 108800177
Centisome position: 59.68
GC content: 67.1
Gene sequence:
>459_bases GTGGCTGACGCATCGCTCATCGGGACGCAACTCGGGAGGACCACGTTTCCCGTCGACCGGTCCAAAGTGCGCGAGTTCGC ACTTTCGCTCGGCGACCGCGACCCGATCTACCAGGACGTCGCGGCCGCCCGCGCCGCCGGCTTCGGCGCGATCCCCGCTC CTCCGACCTTCGTCGTCTCCTCGGCTCACTGGCGCGCCGACGACGACATGTTCGGCGCCCTCGGGCTCGACCTGCGACGC GTACTGCACGGTGAGTGCGGCTGGGAGTATTTCGCGCCGGTGTTCGTCGGCGACGAGCTCACCGAGACTCGTCGGGTGTC GAACGTGACCAGCCGCGAGGGGAAGCGCGGCGGCATCATGACAATCGTGACGATCGAGACCGACTTCACCAACCAGCGCG ACGAACTCGTCGTGCGCCAGACCGACGTCTTGATCGAAACCGGAGGCTCCACCCAATGA
Upstream 100 bases:
>100_bases TCACCCTCGATTGGTCTCGCGCCCGAGCGCATCGCCGAGAACCTCGGCAGCCTCATTCGCGATTGTGCGCCGGCCTTCGC CGGCGGGAAAGGTGACCAGA
Downstream 100 bases:
>100_bases CGACATCCCCCGCGCCGGTGGCGTTGGCCATCGGCGACGAGATGCCGACCTCACAGTTCGGCCCGCTGACGCGCTCGCAC ATCGTTCGCTACGCCGGCTC
Product: MaoC-like dehydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MADASLIGTQLGRTTFPVDRSKVREFALSLGDRDPIYQDVAAARAAGFGAIPAPPTFVVSSAHWRADDDMFGALGLDLRR VLHGECGWEYFAPVFVGDELTETRRVSNVTSREGKRGGIMTIVTIETDFTNQRDELVVRQTDVLIETGGSTQ
Sequences:
>Translated_152_residues MADASLIGTQLGRTTFPVDRSKVREFALSLGDRDPIYQDVAAARAAGFGAIPAPPTFVVSSAHWRADDDMFGALGLDLRR VLHGECGWEYFAPVFVGDELTETRRVSNVTSREGKRGGIMTIVTIETDFTNQRDELVVRQTDVLIETGGSTQ >Mature_151_residues ADASLIGTQLGRTTFPVDRSKVREFALSLGDRDPIYQDVAAARAAGFGAIPAPPTFVVSSAHWRADDDMFGALGLDLRRV LHGECGWEYFAPVFVGDELTETRRVSNVTSREGKRGGIMTIVTIETDFTNQRDELVVRQTDVLIETGGSTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0336 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002539 - InterPro: IPR016709 [H]
Pfam domain/function: PF01575 MaoC_dehydratas [H]
EC number: NA
Molecular weight: Translated: 16606; Mature: 16475
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADASLIGTQLGRTTFPVDRSKVREFALSLGDRDPIYQDVAAARAAGFGAIPAPPTFVVS CCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEE SAHWRADDDMFGALGLDLRRVLHGECGWEYFAPVFVGDELTETRRVSNVTSREGKRGGIM CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECEEEECCCHHHHHHHHHHHHCCCCCCCEE TIVTIETDFTNQRDELVVRQTDVLIETGGSTQ EEEEEECCCCCCCHHEEEEEEEEEEECCCCCC >Mature Secondary Structure ADASLIGTQLGRTTFPVDRSKVREFALSLGDRDPIYQDVAAARAAGFGAIPAPPTFVVS CCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEE SAHWRADDDMFGALGLDLRRVLHGECGWEYFAPVFVGDELTETRRVSNVTSREGKRGGIM CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECEEEECCCHHHHHHHHHHHHCCCCCCCEE TIVTIETDFTNQRDELVVRQTDVLIETGGSTQ EEEEEECCCCCCCHHEEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA