| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800176
Identifier: 108800176
GI number: 108800176
Start: 3403835
End: 3404362
Strand: Reverse
Name: 108800176
Synonym: Mmcs_3210
Alternate gene names: NA
Gene position: 3404362-3403835 (Counterclockwise)
Preceding gene: 108800177
Following gene: 108800175
Centisome position: 59.67
GC content: 65.91
Gene sequence:
>528_bases GTGAGCGCGCCAACGAGCGACGTCACCGGCCTCGGGATGACGTTCGGGACCTTCGACGAAGGCCGGGCGTGGGTCGGTCA TCGCTCCGAACCGCGGCATGCGTGGTTCCCGATCGACCGCTCGATGGTGTTGTACTACTGCTCGCTCGTCGAGGACGCGA ACCCCCGTTACTGGGAGGGTGAGGACTGCCCGCCCGGGCTGCTGATGAGCCTCGGCTTCGCGCCGCAGTGGGTGCCCGGG TACCTAGCGCGTGCCGACATGATGTTCGCGCTCAGCGTCCCGTTGCCGGGCCACCACATCATCAACGCCTCGACGACGAC GGAGTTCGAACGCCGGCCCCGGGTAGGCGATCACGTGTCGATCGTGGAGGAGATCGCCTCGATCTCCGAGCCCAAGACGA CGCGGGTGGGCACCGGTGTGTTCATCACCACGGTGAGCACCTTCTCCGACCAGCACGGTGAGGTCATCGGCCGCAACACC AACGTGCTCTTCCGATACGACACCGCCGATAGTGAAGGCGCATCATGA
Upstream 100 bases:
>100_bases GCGAGGCCGGAGGGCAGCAGGTGGCAGACCTCGAACTCGTGGTCACGCGCCAGACCGGCGAACCCGCGATAAAGGGGAGC GCCGTCGTGCAGGTGACCCG
Downstream 100 bases:
>100_bases ACGACTCCACCGAGCGCAGCATGGTCCGCGTCCCCGTGCGGTTCGAGGACATCGCCGTCGGCGACACCCTGACGCCCGTC TCGATCGAGATCAGCTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSAPTSDVTGLGMTFGTFDEGRAWVGHRSEPRHAWFPIDRSMVLYYCSLVEDANPRYWEGEDCPPGLLMSLGFAPQWVPG YLARADMMFALSVPLPGHHIINASTTTEFERRPRVGDHVSIVEEIASISEPKTTRVGTGVFITTVSTFSDQHGEVIGRNT NVLFRYDTADSEGAS
Sequences:
>Translated_175_residues MSAPTSDVTGLGMTFGTFDEGRAWVGHRSEPRHAWFPIDRSMVLYYCSLVEDANPRYWEGEDCPPGLLMSLGFAPQWVPG YLARADMMFALSVPLPGHHIINASTTTEFERRPRVGDHVSIVEEIASISEPKTTRVGTGVFITTVSTFSDQHGEVIGRNT NVLFRYDTADSEGAS >Mature_174_residues SAPTSDVTGLGMTFGTFDEGRAWVGHRSEPRHAWFPIDRSMVLYYCSLVEDANPRYWEGEDCPPGLLMSLGFAPQWVPGY LARADMMFALSVPLPGHHIINASTTTEFERRPRVGDHVSIVEEIASISEPKTTRVGTGVFITTVSTFSDQHGEVIGRNTN VLFRYDTADSEGAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19314; Mature: 19183
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPTSDVTGLGMTFGTFDEGRAWVGHRSEPRHAWFPIDRSMVLYYCSLVEDANPRYWEG CCCCCCCCCCCCEEECCCCCCCEECCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCEECC EDCPPGLLMSLGFAPQWVPGYLARADMMFALSVPLPGHHIINASTTTEFERRPRVGDHVS CCCCHHHHHHCCCCCCCCCHHHHHHCEEEEEECCCCCCEEEECCCCCHHHHCCCCCCHHH IVEEIASISEPKTTRVGTGVFITTVSTFSDQHGEVIGRNTNVLFRYDTADSEGAS HHHHHHHCCCCCCEECCCCEEEEEEECCCCCCCEEEECCCCEEEEEECCCCCCCC >Mature Secondary Structure SAPTSDVTGLGMTFGTFDEGRAWVGHRSEPRHAWFPIDRSMVLYYCSLVEDANPRYWEG CCCCCCCCCCCEEECCCCCCCEECCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCEECC EDCPPGLLMSLGFAPQWVPGYLARADMMFALSVPLPGHHIINASTTTEFERRPRVGDHVS CCCCHHHHHHCCCCCCCCCHHHHHHCEEEEEECCCCCCEEEECCCCCHHHHCCCCCCHHH IVEEIASISEPKTTRVGTGVFITTVSTFSDQHGEVIGRNTNVLFRYDTADSEGAS HHHHHHHCCCCCCEECCCCEEEEEEECCCCCCCEEEECCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA