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The map label for this gene is 108800141

Identifier: 108800141

GI number: 108800141

Start: 3366579

End: 3367694

Strand: Reverse

Name: 108800141

Synonym: Mmcs_3175

Alternate gene names: NA

Gene position: 3367694-3366579 (Counterclockwise)

Preceding gene: 108800142

Following gene: 108800140

Centisome position: 59.03

GC content: 64.78

Gene sequence:

>1116_bases
ATGGATGTAGTTCCCGCGACGCCTGCCAACCTTGATAATGGTACGTCCTCGCCGGGACCTGGCGAATTCGCCGCGCAGGT
CTATCCAGCAGCCGAGCGCGAGGCGGCTGGCCCGCGCCCCGAGCGCTTCCAGGTCCTCGCTCTCGATGGAGGGGGCGCCA
AGGCGTTGTTCACTGCGCATGTGCTTGCACGTCTGGAGCAGGATCTGGGCGTTAGGATCACCGATTCCTTCGACCTCATT
GCTGGCACGTCGGCGGGCGGCATCGTCGCACTGGGTCTCGGTGCGGGCCTCACGCCGAAGGAGATTGTCTCCCACTACGA
AGAACTGGTCGAGAAAGTCTTTCCGGCGTCGAGGCGGCGAGGATGGCGCCGACCACGGCAGCTGAGATCGCCCATCTATG
ACGCAGAGGCGCTGCGGCAAGCGTTGACCGGCGTCCTCGGAGCCCGACTCCTTGGCGACAGCACGAAGCGACTCGTCATT
CCCGCGTGGGATGTACAACGCGGGGCCGTGCACATCTTCAAGACTCCGCACCACACACGGCTGACCCGCGACTGGCGCAT
ACCGATGGTGGACGTTGCACTGGCGACCTCGGCGGCGCCGCTGTACTTCCCCGCGGCGTACGTCGACGGACACAGGCTCA
TTGACGGCGGAGTATGGGCCAACAACCCGGCTGTCGTCGCGATCGCCGAGGCCGTCAGCATGCTCGGTGTTCCTCTCGAC
GCGATTACCGTCCTCAACGTCGGCACCATTGATCAGCTGACCGATCACCCCAAGCGCTTGGACCGCGGCGGACTCTTACA
CTGGGCAAGACCGATTGCCCCGCTGATCCTTAACGCCAGCAGCCGTGGCGGACAGGGCCTCGCCGAACACTTGATCGGCA
AATCCAACTACACGCGCTTCGACGCTCTAGTGCCCGGCGGCCTCTACGCACTGGACTCGGCGGACCCAAAGGACGTGGCC
GGCCTCGCTGCCTCAGTCAGCCGAGAACTCAGCCCTAGCTACACCGCGAAATTCGCTGACCACCAGGCGCCCGCATACAC
ACCGGTGAACGGACGCCGACACCGCGACGATCCGGGCAGCATTTCACACACGGAGGCCCCCAATGCAACTCGCTGA

Upstream 100 bases:

>100_bases
GCTGAGCCGGAGCATTGACATGGCTGCTGGCTGCGCGGGTCCCCACGCCGGTGGCAATAACGGCTAGGTCGTTGTCGGCG
GAGCGGCGTAGTCTAGTTAC

Downstream 100 bases:

>100_bases
CCACTTCAACGTCTTGCTGAAAGACACGGTCAATCTCAGCCAGTTCAAACTGGACCTACTCAACCAGCGCGTCGAAGCCA
TCTACAAGGCACTCAAAGCC

Product: patatin

Products: NA

Alternate protein names: Patatin Family Protein; Patatin-Like Phospholipase; Patatin-Related Protein; Patatin-Like Protein; Phospholipase Patatin Family; Patatin Family Phospholipase; Phospholipase

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MDVVPATPANLDNGTSSPGPGEFAAQVYPAAEREAAGPRPERFQVLALDGGGAKALFTAHVLARLEQDLGVRITDSFDLI
AGTSAGGIVALGLGAGLTPKEIVSHYEELVEKVFPASRRRGWRRPRQLRSPIYDAEALRQALTGVLGARLLGDSTKRLVI
PAWDVQRGAVHIFKTPHHTRLTRDWRIPMVDVALATSAAPLYFPAAYVDGHRLIDGGVWANNPAVVAIAEAVSMLGVPLD
AITVLNVGTIDQLTDHPKRLDRGGLLHWARPIAPLILNASSRGGQGLAEHLIGKSNYTRFDALVPGGLYALDSADPKDVA
GLAASVSRELSPSYTAKFADHQAPAYTPVNGRRHRDDPGSISHTEAPNATR

Sequences:

>Translated_371_residues
MDVVPATPANLDNGTSSPGPGEFAAQVYPAAEREAAGPRPERFQVLALDGGGAKALFTAHVLARLEQDLGVRITDSFDLI
AGTSAGGIVALGLGAGLTPKEIVSHYEELVEKVFPASRRRGWRRPRQLRSPIYDAEALRQALTGVLGARLLGDSTKRLVI
PAWDVQRGAVHIFKTPHHTRLTRDWRIPMVDVALATSAAPLYFPAAYVDGHRLIDGGVWANNPAVVAIAEAVSMLGVPLD
AITVLNVGTIDQLTDHPKRLDRGGLLHWARPIAPLILNASSRGGQGLAEHLIGKSNYTRFDALVPGGLYALDSADPKDVA
GLAASVSRELSPSYTAKFADHQAPAYTPVNGRRHRDDPGSISHTEAPNATR
>Mature_371_residues
MDVVPATPANLDNGTSSPGPGEFAAQVYPAAEREAAGPRPERFQVLALDGGGAKALFTAHVLARLEQDLGVRITDSFDLI
AGTSAGGIVALGLGAGLTPKEIVSHYEELVEKVFPASRRRGWRRPRQLRSPIYDAEALRQALTGVLGARLLGDSTKRLVI
PAWDVQRGAVHIFKTPHHTRLTRDWRIPMVDVALATSAAPLYFPAAYVDGHRLIDGGVWANNPAVVAIAEAVSMLGVPLD
AITVLNVGTIDQLTDHPKRLDRGGLLHWARPIAPLILNASSRGGQGLAEHLIGKSNYTRFDALVPGGLYALDSADPKDVA
GLAASVSRELSPSYTAKFADHQAPAYTPVNGRRHRDDPGSISHTEAPNATR

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17544092, Length=306, Percent_Identity=25.8169934640523, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17551040, Length=205, Percent_Identity=28.2926829268293, Blast_Score=68, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17567809, Length=205, Percent_Identity=27.3170731707317, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39546; Mature: 39546

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVVPATPANLDNGTSSPGPGEFAAQVYPAAEREAAGPRPERFQVLALDGGGAKALFTAH
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHH
VLARLEQDLGVRITDSFDLIAGTSAGGIVALGLGAGLTPKEIVSHYEELVEKVFPASRRR
HHHHHHHHCCEEEECCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHH
GWRRPRQLRSPIYDAEALRQALTGVLGARLLGDSTKRLVIPAWDVQRGAVHIFKTPHHTR
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCC
LTRDWRIPMVDVALATSAAPLYFPAAYVDGHRLIDGGVWANNPAVVAIAEAVSMLGVPLD
CCCCCCCCEEEHHHHCCCCCCEECCEEECCCEEEECCEECCCCCEEEHHHHHHHHCCCHH
AITVLNVGTIDQLTDHPKRLDRGGLLHWARPIAPLILNASSRGGQGLAEHLIGKSNYTRF
HEEEEECCCHHHHHCCHHHHCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHCCCCCCCEE
DALVPGGLYALDSADPKDVAGLAASVSRELSPSYTAKFADHQAPAYTPVNGRRHRDDPGS
EEECCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
ISHTEAPNATR
CCCCCCCCCCC
>Mature Secondary Structure
MDVVPATPANLDNGTSSPGPGEFAAQVYPAAEREAAGPRPERFQVLALDGGGAKALFTAH
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHH
VLARLEQDLGVRITDSFDLIAGTSAGGIVALGLGAGLTPKEIVSHYEELVEKVFPASRRR
HHHHHHHHCCEEEECCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHH
GWRRPRQLRSPIYDAEALRQALTGVLGARLLGDSTKRLVIPAWDVQRGAVHIFKTPHHTR
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCC
LTRDWRIPMVDVALATSAAPLYFPAAYVDGHRLIDGGVWANNPAVVAIAEAVSMLGVPLD
CCCCCCCCEEEHHHHCCCCCCEECCEEECCCEEEECCEECCCCCEEEHHHHHHHHCCCHH
AITVLNVGTIDQLTDHPKRLDRGGLLHWARPIAPLILNASSRGGQGLAEHLIGKSNYTRF
HEEEEECCCHHHHHCCHHHHCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHCCCCCCCEE
DALVPGGLYALDSADPKDVAGLAASVSRELSPSYTAKFADHQAPAYTPVNGRRHRDDPGS
EEECCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
ISHTEAPNATR
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA