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The map label for this gene is ygdL [C]

Identifier: 108800139

GI number: 108800139

Start: 3363807

End: 3365291

Strand: Reverse

Name: ygdL [C]

Synonym: Mmcs_3173

Alternate gene names: 108800139

Gene position: 3365291-3363807 (Counterclockwise)

Preceding gene: 108800140

Following gene: 108800138

Centisome position: 58.98

GC content: 63.97

Gene sequence:

>1485_bases
GTGCTCGCGGGTCAACGACTATGCATCTATTTGGATCCTTCACGGGAATGGCAGCCGACGCTTGGTGTGGCCGGCCTACT
CACCCGCCTTTGGGACTGGCTCGTCGACGCGGCCGCCGGAAACTTCGACGCCGCCACCGCCATGTACCACGCTGTTGGCG
GAGTGCCGCATCAGGCACATGACACACCGACGATCGTTACCCGAGAACCCGGACCGGCGAAGCGCCACCAAACGGCTCAC
CTGATCGCCCGGTCAACGCACCGATACGACCTGACGTACTCGCCTGGAGCTGCCGGGCATCGCGTACCGGTAATTACCCT
GGCCACCGCGCTGCCGTTCGGTGCCGCATCCACATTCGCGCTACTGCTTGCTCTCCTGGACGACCCCTACCTTGACCGCC
TCGAAGGACGGGCTCCCCGGATCGCACCGCAATCGCCGGCGTTCCTCACCGCCCTCCTGGCGAGTGCGTTACGAAATCAC
CACGACGCCGAGCAATACTTCGTCCTCGCCGTGCCGCACCCCGCTGGAGGCCCACCCCACCTCTTGGGCGGACGGCTCCC
CACCCCAACGGCGAATGCGCTCCGCGAGGTCGCGCAGCAACGGGGTGTGGGGGTTGTTCTCGACCCCGCGAAGATCAACA
CTGAAATCCCGATTGAGTGGTGCAGGATGTCCGACGAACGACCCGAAGTGACAACCCGCCGCGACGACGGCCGCCCCGTG
AACGGATTTCAACGAAAGACTGTCCACATCTGGGGCTGCGGCGGGCTCGGATCATGGATCGCCGAATTCATCGCTCGCGC
AGGAGCATCGGAGATCACCGTGTGCGACCCTGGCATCGTCACCGGCGGCTTGCTCGTCCGACAAAACTACGTCGAAGACG
ACATTGGCCGTTCCAAAGCCGAGGCACTCGCTGGACGGCTCCGCGCGATCCGTGATGACCTGACGGTCACCGTCGCAGAA
GGGCACCTCCCAGAAGACCACACGTCATGCCTGGCAGCGGATCTCATCATCGACGCCACAGTGAACAACGGCATCACGAG
CTGTCTCGATGCGTTGGCAACTGCGCCGACGCGAAAGGCATTGATCGCTCAGGTCGCCACAGACGCTCGCTCTGGCACGC
TCGGCCTAGCCGTGCTGTGCGCCGCAAGCGCAACAGCGACAGTTTCCAGCATCGATCAAGACGCTGGCCGAACAATCCAG
GGCGACAGCGGACTTGAGCTCTACCACACGCTGTGGCAAGAACCCAGCGATGACGAACTTATACCAACCAGGGGCTGCTC
GGTCCCCACATTCCACGGCTCGGCAGCCGACCTCGTAGCGGTCGCAGCCACACTCGTCAACCTGATCGGAAGCCACCTCC
AACAACCGGACTCCGCGGTTTCGGGCACACACCTCATCGCTCTGCCGCACGCGGCCAGCGGCCCCCGACACCACTTCCTC
CCCGGTGTAACGCACCCCATGGATCACACAGCAGGGACAGAATGA

Upstream 100 bases:

>100_bases
ACTTCAAGAGACCGAGGAGTTCATCCTTCAGCTTCGCCCCTCTTCGTACTCGCTACCGGCTATCGACGTTGATCACACTC
GGTTTCTCGGCTACCCCCAT

Downstream 100 bases:

>100_bases
GGGCAACGGAACGTCAACGCAATGCCCCATCAGAGGGCGTCATTGTCGAGCGTCTTCGCACCGAGGCAACCAACTGGATC
AACGCCGTGGCGCTCCAATC

Product: UBA/THIF-type NAD/FAD binding fold

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MLAGQRLCIYLDPSREWQPTLGVAGLLTRLWDWLVDAAAGNFDAATAMYHAVGGVPHQAHDTPTIVTREPGPAKRHQTAH
LIARSTHRYDLTYSPGAAGHRVPVITLATALPFGAASTFALLLALLDDPYLDRLEGRAPRIAPQSPAFLTALLASALRNH
HDAEQYFVLAVPHPAGGPPHLLGGRLPTPTANALREVAQQRGVGVVLDPAKINTEIPIEWCRMSDERPEVTTRRDDGRPV
NGFQRKTVHIWGCGGLGSWIAEFIARAGASEITVCDPGIVTGGLLVRQNYVEDDIGRSKAEALAGRLRAIRDDLTVTVAE
GHLPEDHTSCLAADLIIDATVNNGITSCLDALATAPTRKALIAQVATDARSGTLGLAVLCAASATATVSSIDQDAGRTIQ
GDSGLELYHTLWQEPSDDELIPTRGCSVPTFHGSAADLVAVAATLVNLIGSHLQQPDSAVSGTHLIALPHAASGPRHHFL
PGVTHPMDHTAGTE

Sequences:

>Translated_494_residues
MLAGQRLCIYLDPSREWQPTLGVAGLLTRLWDWLVDAAAGNFDAATAMYHAVGGVPHQAHDTPTIVTREPGPAKRHQTAH
LIARSTHRYDLTYSPGAAGHRVPVITLATALPFGAASTFALLLALLDDPYLDRLEGRAPRIAPQSPAFLTALLASALRNH
HDAEQYFVLAVPHPAGGPPHLLGGRLPTPTANALREVAQQRGVGVVLDPAKINTEIPIEWCRMSDERPEVTTRRDDGRPV
NGFQRKTVHIWGCGGLGSWIAEFIARAGASEITVCDPGIVTGGLLVRQNYVEDDIGRSKAEALAGRLRAIRDDLTVTVAE
GHLPEDHTSCLAADLIIDATVNNGITSCLDALATAPTRKALIAQVATDARSGTLGLAVLCAASATATVSSIDQDAGRTIQ
GDSGLELYHTLWQEPSDDELIPTRGCSVPTFHGSAADLVAVAATLVNLIGSHLQQPDSAVSGTHLIALPHAASGPRHHFL
PGVTHPMDHTAGTE
>Mature_494_residues
MLAGQRLCIYLDPSREWQPTLGVAGLLTRLWDWLVDAAAGNFDAATAMYHAVGGVPHQAHDTPTIVTREPGPAKRHQTAH
LIARSTHRYDLTYSPGAAGHRVPVITLATALPFGAASTFALLLALLDDPYLDRLEGRAPRIAPQSPAFLTALLASALRNH
HDAEQYFVLAVPHPAGGPPHLLGGRLPTPTANALREVAQQRGVGVVLDPAKINTEIPIEWCRMSDERPEVTTRRDDGRPV
NGFQRKTVHIWGCGGLGSWIAEFIARAGASEITVCDPGIVTGGLLVRQNYVEDDIGRSKAEALAGRLRAIRDDLTVTVAE
GHLPEDHTSCLAADLIIDATVNNGITSCLDALATAPTRKALIAQVATDARSGTLGLAVLCAASATATVSSIDQDAGRTIQ
GDSGLELYHTLWQEPSDDELIPTRGCSVPTFHGSAADLVAVAATLVNLIGSHLQQPDSAVSGTHLIALPHAASGPRHHFL
PGVTHPMDHTAGTE

Specific function: Unknown

COG id: COG0476

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52315; Mature: 52315

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAGQRLCIYLDPSREWQPTLGVAGLLTRLWDWLVDAAAGNFDAATAMYHAVGGVPHQAH
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
DTPTIVTREPGPAKRHQTAHLIARSTHRYDLTYSPGAAGHRVPVITLATALPFGAASTFA
CCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHCCCCHHHHHH
LLLALLDDPYLDRLEGRAPRIAPQSPAFLTALLASALRNHHDAEQYFVLAVPHPAGGPPH
HHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCH
LLGGRLPTPTANALREVAQQRGVGVVLDPAKINTEIPIEWCRMSDERPEVTTRRDDGRPV
HCCCCCCCCHHHHHHHHHHHCCCEEEECCHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
NGFQRKTVHIWGCGGLGSWIAEFIARAGASEITVCDPGIVTGGLLVRQNYVEDDIGRSKA
CCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHEECCHHHHHHCHHHH
EALAGRLRAIRDDLTVTVAEGHLPEDHTSCLAADLIIDATVNNGITSCLDALATAPTRKA
HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHEEEEHHCCCHHHHHHHHHCCCHHHH
LIAQVATDARSGTLGLAVLCAASATATVSSIDQDAGRTIQGDSGLELYHTLWQEPSDDEL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCCCCC
IPTRGCSVPTFHGSAADLVAVAATLVNLIGSHLQQPDSAVSGTHLIALPHAASGPRHHFL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCC
PGVTHPMDHTAGTE
CCCCCCCCCCCCCC
>Mature Secondary Structure
MLAGQRLCIYLDPSREWQPTLGVAGLLTRLWDWLVDAAAGNFDAATAMYHAVGGVPHQAH
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
DTPTIVTREPGPAKRHQTAHLIARSTHRYDLTYSPGAAGHRVPVITLATALPFGAASTFA
CCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHCCCCHHHHHH
LLLALLDDPYLDRLEGRAPRIAPQSPAFLTALLASALRNHHDAEQYFVLAVPHPAGGPPH
HHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCH
LLGGRLPTPTANALREVAQQRGVGVVLDPAKINTEIPIEWCRMSDERPEVTTRRDDGRPV
HCCCCCCCCHHHHHHHHHHHCCCEEEECCHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
NGFQRKTVHIWGCGGLGSWIAEFIARAGASEITVCDPGIVTGGLLVRQNYVEDDIGRSKA
CCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHEECCHHHHHHCHHHH
EALAGRLRAIRDDLTVTVAEGHLPEDHTSCLAADLIIDATVNNGITSCLDALATAPTRKA
HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHEEEEHHCCCHHHHHHHHHCCCHHHH
LIAQVATDARSGTLGLAVLCAASATATVSSIDQDAGRTIQGDSGLELYHTLWQEPSDDEL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCCCCC
IPTRGCSVPTFHGSAADLVAVAATLVNLIGSHLQQPDSAVSGTHLIALPHAASGPRHHFL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCC
PGVTHPMDHTAGTE
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA