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The map label for this gene is ybcL [C]

Identifier: 108800129

GI number: 108800129

Start: 3353881

End: 3354417

Strand: Reverse

Name: ybcL [C]

Synonym: Mmcs_3163

Alternate gene names: 108800129

Gene position: 3354417-3353881 (Counterclockwise)

Preceding gene: 108800130

Following gene: 108800125

Centisome position: 58.79

GC content: 67.41

Gene sequence:

>537_bases
ATGGCTTTTCCGTACAACCCGTATGAGTTCCTGCCACAACTGCCGTCGTTCACGCTGACCTCCGAGTCGGTGACCGACGG
GCAGCCGCTGGCCAACGATCAGGTGAGCGGCCTGATGGGTGCCGGCGGTTCCGACGTCTCGCCGCAGCTGTCGTGGTCAG
GCTTCCCGGAGGAGACGCGCAGTTTCGCCGTCACCGTCTACGACCCCGACGCCCCGACCGGATCCGGCTTCTGGCACTGG
GCGGTGTTCAACCTGCCCGCCACCGTCACCGAACTGCCCGCCGGTGTCGGCGACGGCAGCGCCAAGGGCTTCCCGGGTGA
TGCGGTGACGCTGGCCAACGACGCGGGCATGAAGCGTTACGTCGGTGCCGCCCCGCCGCCGGGACACGGTCCGCACCGCT
ACTTCATCGTGGTGCATGCCGTCGACGTCGAGAAGCTCGACATCCCCGAGGACGCGACCCCGGCCTATCTCGGGTTCAAC
CTGTTCAGCCACGCGATCGCCCGCGCGATCATCCACGGCACCTACGAGCAGAAGTAG

Upstream 100 bases:

>100_bases
CGACGAACGGGTACCCGTCGACGCGCTCGAGTTCGGGGCGCAGGTTCTGCAACACTTTCTCGAGCACTGCTGAGCGGTTC
CCTACACGCGAAAGGACATC

Downstream 100 bases:

>100_bases
GTCCGGCTCAGCCGCGAGCAGACGCAGAATCGCGTGATCCGGTGCGCAGGAACGCGATTCTGTGTCTGCTCGCGCCCGGA
ACTCACTGCCGCATCGCGGA

Product: PBP family phospholipid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MAFPYNPYEFLPQLPSFTLTSESVTDGQPLANDQVSGLMGAGGSDVSPQLSWSGFPEETRSFAVTVYDPDAPTGSGFWHW
AVFNLPATVTELPAGVGDGSAKGFPGDAVTLANDAGMKRYVGAAPPPGHGPHRYFIVVHAVDVEKLDIPEDATPAYLGFN
LFSHAIARAIIHGTYEQK

Sequences:

>Translated_178_residues
MAFPYNPYEFLPQLPSFTLTSESVTDGQPLANDQVSGLMGAGGSDVSPQLSWSGFPEETRSFAVTVYDPDAPTGSGFWHW
AVFNLPATVTELPAGVGDGSAKGFPGDAVTLANDAGMKRYVGAAPPPGHGPHRYFIVVHAVDVEKLDIPEDATPAYLGFN
LFSHAIARAIIHGTYEQK
>Mature_177_residues
AFPYNPYEFLPQLPSFTLTSESVTDGQPLANDQVSGLMGAGGSDVSPQLSWSGFPEETRSFAVTVYDPDAPTGSGFWHWA
VFNLPATVTELPAGVGDGSAKGFPGDAVTLANDAGMKRYVGAAPPPGHGPHRYFIVVHAVDVEKLDIPEDATPAYLGFNL
FSHAIARAIIHGTYEQK

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=169, Percent_Identity=44.9704142011834, Blast_Score=142, Evalue=1e-35,
Organism=Escherichia coli, GI1786990, Length=155, Percent_Identity=45.8064516129032, Blast_Score=134, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 18924; Mature: 18793

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFPYNPYEFLPQLPSFTLTSESVTDGQPLANDQVSGLMGAGGSDVSPQLSWSGFPEETR
CCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
SFAVTVYDPDAPTGSGFWHWAVFNLPATVTELPAGVGDGSAKGFPGDAVTLANDAGMKRY
EEEEEEECCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHH
VGAAPPPGHGPHRYFIVVHAVDVEKLDIPEDATPAYLGFNLFSHAIARAIIHGTYEQK
CCCCCCCCCCCCEEEEEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AFPYNPYEFLPQLPSFTLTSESVTDGQPLANDQVSGLMGAGGSDVSPQLSWSGFPEETR
CCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
SFAVTVYDPDAPTGSGFWHWAVFNLPATVTELPAGVGDGSAKGFPGDAVTLANDAGMKRY
EEEEEEECCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHH
VGAAPPPGHGPHRYFIVVHAVDVEKLDIPEDATPAYLGFNLFSHAIARAIIHGTYEQK
CCCCCCCCCCCCEEEEEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]